Gene: Os11g0602400
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os11g0602400
- Transcript Identifier Os11t0602400-01
- Gene Type Coding gene
- Location chr11 : 23177849-23178727 : positive
Gene Family Information
- ID HOM05D003786
- #Genes/#Species 182/96
- Phylogenetic origin
- ID ORTHO05D004375
- #Genes/#Species 182/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os11t0602400-01
- MSU-ID LOC_Os11g38930.1
- uniprot Q2R1K2
Descriptions
- Description tRNA intron endonuclease, catalytic domain-like domain containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006388 | IEA | GOA Database | tRNA splicing, via endonucleolytic cleavage and ligation | |
GO:0006388 | IEA | InterPro | tRNA splicing, via endonucleolytic cleavage and ligation | |
GO:0000379 | IBA | GOA Database | tRNA-type intron splice site recognition and cleavage | |
GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic | |
GO:0090501 | IEA | GOA Database | RNA phosphodiester bond hydrolysis |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004518 | IEA | GOA Database | nuclease activity | |
GO:0004518 | IEA | InterPro | nuclease activity | |
GO:0003676 | IEA | GOA Database | nucleic acid binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0000213 | IBA IEA | GOA Database | tRNA-intron endonuclease activity | |
GO:0000213 | IEA | InterPro | tRNA-intron endonuclease activity | |
GO:0004519 | IEA | GOA Database | endonuclease activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000214 | IBA | GOA Database | tRNA-intron endonuclease complex | |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |