Gene: Os11g0602400

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0602400
  • Transcript Identifier Os11t0602400-01
  • Gene Type Coding gene
  • Location chr11 : 23177849-23178727 : positive

Gene Family Information

  • ID HOM05D003786
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0602400-01
  • MSU-ID LOC_Os11g38930.1
  • uniprot Q2R1K2

Descriptions

  • Description tRNA intron endonuclease, catalytic domain-like domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006388
IEA
GOA DatabasetRNA splicing, via endonucleolytic cleavage and ligation
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation
GO:0000379
IBA
GOA DatabasetRNA-type intron splice site recognition and cleavage
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0000213
IBA
IEA
GOA DatabasetRNA-intron endonuclease activity
GO:0000213
IEA
InterProtRNA-intron endonuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000214
IBA
GOA DatabasetRNA-intron endonuclease complex
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006677 tRNA intron endonuclease, catalytic domain-like
IPR006676 tRNA-splicing endonuclease
IPR006678 tRNA intron endonuclease, N-terminal
IPR036167 tRNA intron endonuclease, catalytic domain-like superfamily
IPR011856 tRNA endonuclease-like domain superfamily
Mapman id Description
35.1 not assigned.annotated