Gene: Lsat_1_v5_gn_2_25281

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_2_25281
  • Transcript Identifier Lsat_1_v5_gn_2_25281.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_2 : 55762091-55762354 : positive

Gene Family Information

  • ID HOM05D003786
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_2_25281.v5
  • pacid 38962087

Descriptions

  • Description 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000213
IEA
InterProtRNA-intron endonuclease activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0004518
IEA
InterPronuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036167 tRNA intron endonuclease, catalytic domain-like superfamily
IPR006676 tRNA-splicing endonuclease
IPR006677 tRNA intron endonuclease, catalytic domain-like
IPR011856 tRNA endonuclease-like domain superfamily
Mapman id Description
35.1 not assigned.annotated