Gene: COL.COLO4_25255

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_25255
  • Transcript Identifier COL.rna23988
  • Gene Type Coding gene
  • Location AWUE01018979.1 : 56051-57349 : positive

Gene Family Information

  • ID HOM05D003786
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna23988
  • GenBank OMO77242.1
  • id gene25227
  • gene_name COLO4_25255
  • uniprot A0A1R3I3S0

Descriptions

  • Description tRNA-splicing endonuclease
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0006388
IEA
GOA DatabasetRNA splicing, via endonucleolytic cleavage and ligation
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0000213
IEA
GOA DatabasetRNA-intron endonuclease activity
GO:0000213
IEA
InterProtRNA-intron endonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011856 tRNA endonuclease-like domain superfamily
IPR006678 tRNA intron endonuclease, N-terminal
IPR006677 tRNA intron endonuclease, catalytic domain-like
IPR006676 tRNA-splicing endonuclease
IPR036167 tRNA intron endonuclease, catalytic domain-like superfamily
Mapman id Description
35.1 not assigned.annotated