Gene: FAN24G0412
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN24G0412
- Transcript Identifier FAN24G0412.1
- Gene Type Coding gene
- Location Fvb2-2 : 12232110-12235386 : positive
Gene Family Information
- ID HOM05D003786
- #Genes/#Species 182/96
- Phylogenetic origin
- ID ORTHO05D004375
- #Genes/#Species 182/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id maker-Fvb2-2-augustus-gene-122.34.v1.0.a1
- pacid 50550531
Descriptions
- Description PF01974//PF02778//PF12928 - tRNA intron endonuclease, catalytic C-terminal domain (tRNA_int_endo) // tRNA intron endonuclease, N-terminal domain (tRNA_int_endo_N) // tRNA-splicing endonuclease subunit sen54 N-term (tRNA_int_end_N2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006388 | IEA | InterPro | tRNA splicing, via endonucleolytic cleavage and ligation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000213 | IEA | InterPro | tRNA-intron endonuclease activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004518 | IEA | InterPro | nuclease activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006677 | tRNA intron endonuclease, catalytic domain-like |
| IPR024336 | tRNA-splicing endonuclease, subunit Sen54, N-terminal |
| IPR011856 | tRNA endonuclease-like domain superfamily |
| IPR006676 | tRNA-splicing endonuclease |
| IPR036167 | tRNA intron endonuclease, catalytic domain-like superfamily |
| IPR006678 | tRNA intron endonuclease, N-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |