Gene: Pp3c27_2720

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c27_2720
  • Transcript Identifier Pp3c27_2720V3.2
  • Gene Type Coding gene
  • Location Chr27 : 1519576-1521135 : positive

Gene Family Information

  • ID HOM05D003786
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c27_2720V3.2
  • pacid 32952244
  • alias Phpat.027G011300
  • alias Phypa_125452
  • alias Pp1s54_207V6
  • uniprot A0A2K1IAE6

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006388
IEA
GOA DatabasetRNA splicing, via endonucleolytic cleavage and ligation
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0000379
IBA
GOA DatabasetRNA-type intron splice site recognition and cleavage

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0000213
IBA
IEA
GOA DatabasetRNA-intron endonuclease activity
GO:0000213
IEA
InterProtRNA-intron endonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000214
IBA
GOA DatabasetRNA-intron endonuclease complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011856 tRNA endonuclease-like domain superfamily
IPR006676 tRNA-splicing endonuclease
IPR036167 tRNA intron endonuclease, catalytic domain-like superfamily
IPR006678 tRNA intron endonuclease, N-terminal
IPR006677 tRNA intron endonuclease, catalytic domain-like
Mapman id Description
35.1 not assigned.annotated