Gene: FAN05G4299

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN05G4299
  • Transcript Identifier FAN05G4299.1
  • Gene Type Coding gene
  • Location Fvb6-3 : 42218794-42219585 : positive

Gene Family Information

  • ID HOM05D003786
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id snap_masked-Fvb6-3-processed-gene-422.22.v1.0.a1
  • pacid 50504163

Descriptions

  • Description 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000213
IEA
InterProtRNA-intron endonuclease activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0004518
IEA
InterPronuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006678 tRNA intron endonuclease, N-terminal
IPR006676 tRNA-splicing endonuclease
IPR036167 tRNA intron endonuclease, catalytic domain-like superfamily
IPR011856 tRNA endonuclease-like domain superfamily
IPR006677 tRNA intron endonuclease, catalytic domain-like
Mapman id Description
35.1 not assigned.annotated