Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3185 Papaver somniferum HOM05D005037 ORTHO05D006274 4.1e-218 761.1 391 100.0
PSO675G6067 Papaver somniferum HOM05D005037 ORTHO05D006274 3.8e-216 754.6 391 99.2
PSO421G0325 Papaver somniferum HOM05D005037 ORTHO05D006274 1.1e-167 593.6 379 78.9
PSO673G0007 Papaver somniferum HOM05D005037 ORTHO05D006274 2.5e-167 592.4 379 78.6
PSO673G0037 Papaver somniferum HOM05D005037 ORTHO05D006274 6.4e-147 524.6 357 75.9
TAR381G0890 Trochodendron aralioides HOM05D005037 ORTHO05D006274 9.2e-146 520.8 382 70.7
Cc10_g13130 Coffea canephora HOM05D005037 ORTHO05D006274 3.9e-144 515.4 383 68.1
Atru.chr13.1666 Acer truncatum HOM05D005037 ORTHO05D006274 1.2e-142 510.4 382 68.8
Ciclev10001639m.g Citrus clementina HOM05D005037 ORTHO05D006274 1.2e-142 510.4 382 68.6
Duzib041G0013 Durio zibethinus HOM05D005037 ORTHO05D006274 1.1e-141 507.3 390 67.9
Potri.002G073200 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.4e-141 506.9 377 68.7
Actinidia16585 Actinidia chinensis HOM05D005037 ORTHO05D006274 4.0e-141 505.4 382 68.1
Sc02g0004500 Simmondsia chinensis HOM05D005037 ORTHO05D006274 8.9e-141 504.2 383 67.6
Thecc.08G141200 Theobroma cacao HOM05D005037 ORTHO05D006274 8.9e-141 504.2 390 67.7
Oeu002392.1 Olea europaea HOM05D005037 ORTHO05D006274 1.5e-140 503.4 382 66.5
Hund17388 Selenicereus undatus HOM05D005037 ORTHO05D006274 1.5e-140 503.4 383 66.8
TWI32G0322 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 2.0e-140 503.1 382 67.3
CARHR035400 Cardamine hirsuta HOM05D005037 ORTHO05D006274 2.6e-140 502.7 386 65.8
PGSC0003DMG400024852 Solanum tuberosum HOM05D005037 ORTHO05D006274 2.6e-140 502.7 383 68.1
Manes.02G173400 Manihot esculenta HOM05D005037 ORTHO05D006274 3.4e-140 502.3 383 66.6
BolC5t32377H Brassica oleracea HOM05D005037 ORTHO05D006274 5.8e-140 501.5 382 66.0
AL1G51980 Arabidopsis lyrata HOM05D005037 ORTHO05D006274 7.6e-140 501.1 386 65.8
Sp1g33080 Schrenkiella parvula HOM05D005037 ORTHO05D006274 7.6e-140 501.1 382 66.5
Nn5g28553 Nelumbo nucifera HOM05D005037 ORTHO05D006274 1.7e-139 500.0 382 67.8
Migut.C01102 Erythranthe guttata HOM05D005037 ORTHO05D006274 2.2e-139 499.6 382 66.5
Peaxi162Scf00066g01930 Petunia axillaris HOM05D005037 ORTHO05D006274 2.2e-139 499.6 385 67.8
Eucgr.G02653 Eucalyptus grandis HOM05D005037 ORTHO05D006274 2.9e-139 499.2 382 67.5
Gohir.D02G074100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 2.9e-139 499.2 390 67.2
Aqoxy6G00356 Aquilegia oxysepala HOM05D005037 ORTHO05D006274 3.7e-139 498.8 382 67.0
EL10Ac4g08872 Beta vulgaris HOM05D005037 ORTHO05D006274 3.7e-139 498.8 383 66.3
ATR1136G011 Amborella trichopoda HOM05D005037 ORTHO05D006274 4.9e-139 498.4 382 67.0
MSTRG.1382 Avicennia marina HOM05D005037 ORTHO05D006274 6.4e-139 498.0 382 66.0
Carub.0001s3480 Capsella rubella HOM05D005037 ORTHO05D006274 6.4e-139 498.0 386 65.5
DCAR_015244 Daucus carota HOM05D005037 ORTHO05D006274 6.4e-139 498.0 391 66.5
Thhalv10011594m.g Eutrema salsugineum HOM05D005037 ORTHO05D006274 6.4e-139 498.0 382 66.0
AT1G43860 Arabidopsis thaliana HOM05D005037 ORTHO05D006274 1.1e-138 497.3 386 64.8
EL10Ac1g01450 Beta vulgaris HOM05D005037 ORTHO05D006274 1.1e-138 497.3 383 66.1
BcaC05g27657 Brassica carinata HOM05D005037 ORTHO05D006274 1.1e-138 497.3 382 64.9
C05p36450 Brassica napus HOM05D005037 ORTHO05D006274 1.1e-138 497.3 382 64.9
Gohir.A02G068100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 1.9e-138 496.5 388 66.8
Nitab4.5_0000174g0240 Nicotiana tabacum HOM05D005037 ORTHO05D006274 1.9e-138 496.5 385 67.8
SalBow7G3864 Salvia bowleyana HOM05D005037 ORTHO05D006274 1.9e-138 496.5 382 66.5
TWI60G0144 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 4.1e-138 495.4 383 66.1
Duzib116G0940 Durio zibethinus HOM05D005037 ORTHO05D006274 5.4e-138 495.0 390 67.2
A05p21790 Brassica napus HOM05D005037 ORTHO05D006274 9.2e-138 494.2 382 64.4
BraA05t21100Z Brassica rapa HOM05D005037 ORTHO05D006274 9.2e-138 494.2 382 64.4
CAN.G657.3 Capsicum annuum HOM05D005037 ORTHO05D006274 9.2e-138 494.2 378 69.0
Gorai.005G083500 Gossypium raimondii HOM05D005037 ORTHO05D006274 9.2e-138 494.2 391 67.0
MD05G1011400 Malus domestica HOM05D005037 ORTHO05D006274 1.2e-137 493.8 399 64.7
vmacro08710 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 1.2e-137 493.8 382 66.5
Nitab4.5_0002972g0050 Nicotiana tabacum HOM05D005037 ORTHO05D006274 2.1e-137 493.0 382 68.3
Sabra05G0142600 Salix brachista HOM05D005037 ORTHO05D006274 2.1e-137 493.0 383 67.9
GSVIVG01010010001 Vitis vinifera HOM05D005037 ORTHO05D006274 2.1e-137 493.0 383 68.1
AUR62027497 Chenopodium quinoa HOM05D005037 ORTHO05D006274 2.7e-137 492.7 382 66.5
DCAR_019815 Daucus carota HOM05D005037 ORTHO05D006274 3.5e-137 492.3 391 66.0
PGR142G4097 Punica granatum HOM05D005037 ORTHO05D006274 3.5e-137 492.3 382 66.2
A10p07730 Brassica napus HOM05D005037 ORTHO05D006274 6.0e-137 491.5 382 64.4
BraSC36t46032Z Brassica rapa HOM05D005037 ORTHO05D006274 6.0e-137 491.5 382 64.4
BcaB02g11416 Brassica carinata HOM05D005037 ORTHO05D006274 7.8e-137 491.1 382 64.7
AUR62033983 Chenopodium quinoa HOM05D005037 ORTHO05D006274 1.7e-136 490.0 382 66.5
Rhsim03G0093500 Rhododendron simsii HOM05D005037 ORTHO05D006274 2.3e-136 489.6 382 67.5
Solyc04g064570.3 Solanum lycopersicum HOM05D005037 ORTHO05D006274 2.3e-136 489.6 382 66.2
Sopen04g026520 Solanum pennellii HOM05D005037 ORTHO05D006274 3.0e-136 489.2 382 66.2
RcHm_v2.0_Chr6g0277561 Rosa chinensis HOM05D005037 ORTHO05D006274 3.3e-135 485.7 391 63.7
Cpa.g.sc13.102 Carica papaya HOM05D005037 ORTHO05D006274 4.3e-135 485.3 383 66.1
Potri.005G186700 Populus trichocarpa HOM05D005037 ORTHO05D006274 7.3e-135 484.6 383 65.8
Ah.10g032080 Amaranthus hybridus HOM05D005037 ORTHO05D006274 9.6e-135 484.2 382 65.4
BcaB07g33972 Brassica carinata HOM05D005037 ORTHO05D006274 1.6e-134 483.4 382 64.1
Prupe.8G016400 Prunus persica HOM05D005037 ORTHO05D006274 6.8e-133 478.0 386 64.0
Lsat_1_v5_gn_1_9740 Lactuca sativa HOM05D005037 ORTHO05D006274 1.2e-132 477.2 388 63.9
Haze_17689 Corylus avellana HOM05D005037 ORTHO05D006274 2.6e-132 476.1 383 65.0
Aa31LG6G9500 Aethionema arabicum HOM05D005037 ORTHO05D006274 4.4e-132 475.3 393 63.9
FvH4_2g15010 Fragaria vesca HOM05D005037 ORTHO05D006274 4.4e-132 475.3 398 62.6
HPP92_020501 Vanilla planifolia HOM05D005037 ORTHO05D006274 4.9e-131 471.9 382 64.1
CDE02G2089 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 8.4e-131 471.1 382 63.4
FAN24G2486 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.4e-130 470.3 402 62.4
THA.LOC104798858 Tarenaya hassleriana HOM05D005037 ORTHO05D006274 1.4e-130 470.3 393 63.9
HanXRQChr04g0109491 Helianthus annuus HOM05D005037 ORTHO05D006274 7.1e-130 468.0 383 64.0
CANSAT54G1160 Cannabis sativa HOM05D005037 ORTHO05D006274 2.7e-129 466.1 385 63.6
FAN27G1276 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.3e-128 463.8 403 61.5
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 5.6e-127 458.4 373 62.7
CiPaw.16G018700 Carya illinoinensis HOM05D005037 ORTHO05D006274 1.6e-126 456.8 382 61.5
MELO3C010584.2 Cucumis melo HOM05D005037 ORTHO05D006274 2.1e-126 456.4 383 61.9
SGA_v2.0_scaffold25G11149 Striga asiatica HOM05D005037 ORTHO05D006274 2.1e-126 456.4 410 60.2
CsaV3_6G035600 Cucumis sativus L. HOM05D005037 ORTHO05D006274 2.8e-126 456.1 383 61.6
ECA233G3664 Erigeron canadensis HOM05D005037 ORTHO05D006274 8.1e-126 454.5 370 63.2
QL09p029039 Quercus lobata HOM05D005037 ORTHO05D006274 1.1e-125 454.1 382 62.0
arahy.Tifrunner.gnm1.ann1.HCD3KF Arachis hypogaea HOM05D005037 ORTHO05D006274 1.4e-125 453.8 384 60.9
Lalb_Chr21g0311851 Lupinus albus HOM05D005037 ORTHO05D006274 3.1e-125 452.6 383 62.1
arahy.Tifrunner.gnm1.ann1.E7XDIB Arachis hypogaea HOM05D005037 ORTHO05D006274 4.0e-125 452.2 384 60.4
VMungo0540G1405 Vigna mungo HOM05D005037 ORTHO05D006274 4.0e-125 452.2 383 61.4
arahy.Tifrunner.gnm1.ann1.RY8QGI Arachis hypogaea HOM05D005037 ORTHO05D006274 9.0e-125 451.1 383 60.6
ClCG08G002740 Citrullus lanatus HOM05D005037 ORTHO05D006274 9.0e-125 451.1 383 60.6
Lalb_Chr02g0149921 Lupinus albus HOM05D005037 ORTHO05D006274 3.4e-124 449.1 383 61.9
Phvul.006G102500 Phaseolus vulgaris HOM05D005037 ORTHO05D006274 7.6e-124 448.0 383 61.4
Psat1g039480 Pisum sativum HOM05D005037 ORTHO05D006274 1.7e-123 446.8 383 61.1
Sed0001170 Sechium edule HOM05D005037 ORTHO05D006274 4.9e-123 445.3 383 60.1
Ca_30116_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 2.4e-122 443.0 383 60.3
TPR.G31447 Trifolium pratense HOM05D005037 ORTHO05D006274 1.2e-121 440.7 383 59.5
Lj1g0018953 Lotus japonicus HOM05D005037 ORTHO05D006274 3.5e-121 439.1 383 60.8
Lj4g0018852 Lotus japonicus HOM05D005037 ORTHO05D006274 7.9e-121 438.0 383 60.1
Medtr6g085170 Medicago truncatula HOM05D005037 ORTHO05D006274 7.9e-121 438.0 383 59.8
Glyma.14G119400 Glycine max HOM05D005037 ORTHO05D006274 3.0e-120 436.0 383 59.5
CSS0001186 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.5e-119 433.7 336 67.9
SEGI_36163 Sequoiadendron giganteum HOM05D005037 ORTHO05D006274 1.1e-117 427.6 381 57.7
Glyma.11G142700 Glycine max HOM05D005037 ORTHO05D006274 5.3e-117 425.2 383 58.5
SHI09275 Sapria himalayana HOM05D005037 ORTHO05D006274 6.9e-117 424.9 385 59.0
Lj4A690T47 Lonicera japonica HOM05D005037 ORTHO05D006274 1.5e-116 423.7 330 68.8
ECA234G0804 Erigeron canadensis HOM05D005037 ORTHO05D006274 1.9e-114 416.8 392 56.4
Pp3c4_180 Physcomitrium patens HOM05D005037 ORTHO05D006274 6.7e-112 408.3 390 54.4
Os08g0107500 Oryza sativa ssp. japonica HOM05D005037 ORTHO05D006274 3.7e-110 402.5 383 55.4
Zm00001eb260230 Zea mays HOM05D005037 ORTHO05D006274 5.8e-108 395.2 383 54.8
Dinv41137 Davidia involucrata HOM05D005037 ORTHO05D006274 1.7e-107 393.7 369 60.4
Oeu001556.2 Olea europaea HOM05D005037 ORTHO05D006274 4.9e-107 392.1 376 58.8
HPP92_020498 Vanilla planifolia HOM05D005037 ORTHO05D006274 4.9e-107 392.1 336 62.5
CSS0023189 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.1e-103 380.9 336 61.3
unitig_747.g21501 Utricularia gibba HOM05D005037 ORTHO05D006274 3.3e-103 379.4 289 68.5
SMO348G0060 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 2.2e-99 366.7 380 51.1
COL.COLO4_33811 Corchorus olitorius HOM05D005037 ORTHO05D006274 1.6e-97 360.5 390 53.8
AagrBONN_evm.TU.Sc2ySwM_117.3544 Anthoceros agrestis HOM05D005037 ORTHO05D006274 7.9e-97 358.2 380 51.1
vmacro21120 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 5.3e-93 345.5 294 61.2
Cfa018383 Carpinus fangiana HOM05D005037 ORTHO05D006274 6.1e-89 332.0 315 57.5
Ca_25512_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 6.1e-89 332.0 326 54.6
PSO017G3306 Papaver somniferum HOM05D005037 ORTHO05D006274 1.2e-81 307.8 328 57.3
FAN20G2613 Fragaria x ananassa HOM05D005037 ORTHO05D006274 7.7e-76 288.5 205 73.7
PSO729G0215 Papaver somniferum HOM05D005037 ORTHO05D006274 6.7e-72 275.4 258 60.1
FAN15G0656 Fragaria x ananassa HOM05D005037 ORTHO05D006274 4.0e-64 249.6 166 75.9
SMO272G0010 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 1.2e-63 248.1 161 75.8
PRCOL_00006527 Prasinoderma coloniale HOM05D005037 ORTHO05D006274 8.3e-62 241.9 387 38.0
Cre01.g017500 Chlamydomonas reinhardtii HOM05D005037 ORTHO05D006274 3.1e-61 240.0 251 50.6
MD05G1011500 Malus domestica HOM05D005037 ORTHO05D006274 5.5e-58 229.2 228 52.6
CSS0016864 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.1e-50 204.9 159 69.2
CBR_g48721 Chara braunii HOM05D005037 ORTHO05D006274 4.3e-50 203.0 331 35.3
MCO07G375 Micromonas commoda HOM05D005037 ORTHO05D006274 1.3e-46 191.4 174 53.4
CSS0012113 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 3.7e-46 189.9 167 61.1
CSS0029081 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.3e-43 181.4 167 59.3
Mapoly0003s0227 Marchantia polymorpha HOM05D005037 ORTHO05D006274 4.3e-42 176.4 231 42.4
Aa31LG6G9600 Aethionema arabicum HOM05D005037 ORTHO05D006274 2.5e-34 150.6 169 47.3
PSO729G0072 Papaver somniferum HOM05D005037 ORTHO05D006274 1.1e-32 145.2 193 46.1
C06p00420 Brassica napus HOM05D005037 ORTHO05D006274 3.7e-30 136.7 133 58.6
C06p00390 Brassica napus HOM05D005037 ORTHO05D006274 8.3e-30 135.6 133 57.9
vmacro21119 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 2.3e-27 127.5 120 56.7
RcHm_v2.0_Chr2g0145391 Rosa chinensis HOM05D005037 ORTHO05D006274 1.2e-25 121.7 81 75.3
Actinidia15170 Actinidia chinensis HOM05D005037 ORTHO05D006274 2.1e-25 120.9 84 63.1
BraA06t27783Z Brassica rapa HOM05D005037 ORTHO05D013118 1.1e-21 108.6 134 44.0
Actinidia15171 Actinidia chinensis HOM05D005037 ORTHO05D006274 3.9e-19 100.1 80 61.2
CSS0019617 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 6.4e-14 82.8 50 74.0
CSS0038364 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 6.4e-14 82.8 50 74.0
BraA01t00001Z Brassica rapa HOM05D005037 ORTHO05D013118 3.2e-13 80.5 68 57.4


User provided reference genes

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