Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO421G0508 Papaver somniferum HOM05D005384 ORTHO05D006477 2.4e-139 498.8 249 100.0
PSO423G0094 Papaver somniferum HOM05D005384 ORTHO05D006477 2.1e-79 299.7 241 66.8
PSO170G5666 Papaver somniferum HOM05D005384 ORTHO05D006477 1.1e-78 297.4 240 66.7
PSO135G0014 Papaver somniferum HOM05D005384 ORTHO05D006477 1.5e-77 293.5 240 66.2
PSO407G0145 Papaver somniferum HOM05D005384 ORTHO05D006477 4.4e-77 292.0 240 65.8
PSO384G3834 Papaver somniferum HOM05D005384 ORTHO05D006477 7.1e-67 258.1 245 61.2
PSO421G0584 Papaver somniferum HOM05D001342 ORTHO05D006477 6.0e-50 201.8 166 63.9
PSO782G2179 Papaver somniferum HOM05D005384 ORTHO05D006477 5.3e-30 135.6 161 50.3
PSO063G2107 Papaver somniferum HOM05D005384 ORTHO05D006477 4.5e-29 132.5 167 46.7
Lj3C397G6 Lonicera japonica HOM05D005384 ORTHO05D006477 2.4e-22 110.2 110 50.9
Dinv05843 Davidia involucrata HOM05D005384 ORTHO05D006477 1.2e-21 107.8 132 44.7
QL02p064091 Quercus lobata HOM05D005384 ORTHO05D006477 2.6e-21 106.7 82 61.0
Rhsim07G0122100 Rhododendron simsii HOM05D005384 ORTHO05D006477 2.6e-21 106.7 99 53.5
Haze_14319 Corylus avellana HOM05D005384 ORTHO05D006477 4.5e-21 105.9 98 52.0
Lj2A247G82 Lonicera japonica HOM05D005384 ORTHO05D006477 4.5e-21 105.9 175 39.4
CiPaw.03G076200 Carya illinoinensis HOM05D005384 ORTHO05D006477 5.9e-21 105.5 170 41.2
Nitab4.5_0009567g0040 Nicotiana tabacum HOM05D005384 ORTHO05D006477 1.3e-20 104.4 110 49.1
Actinidia10880 Actinidia chinensis HOM05D005384 ORTHO05D006477 2.2e-20 103.6 110 48.2
arahy.Tifrunner.gnm1.ann1.EB4ABC Arachis hypogaea HOM05D005384 ORTHO05D006477 2.2e-20 103.6 82 57.3
arahy.Tifrunner.gnm1.ann1.R6E3N5 Arachis hypogaea HOM05D005384 ORTHO05D006477 2.2e-20 103.6 82 57.3
FvH4_7g04410 Fragaria vesca HOM05D005384 ORTHO05D006477 2.2e-20 103.6 99 52.5
FAN01G0265 Fragaria x ananassa HOM05D005384 ORTHO05D006477 2.2e-20 103.6 99 52.5
FAN06G1991 Fragaria x ananassa HOM05D005384 ORTHO05D006477 2.2e-20 103.6 99 52.5
HanXRQChr17g0535751 Helianthus annuus HOM05D005384 ORTHO05D006477 2.2e-20 103.6 99 50.5
CANSAT25G0269 Cannabis sativa HOM05D005384 ORTHO05D006477 2.9e-20 103.2 82 56.1
Duzib133G1182 Durio zibethinus HOM05D005384 ORTHO05D006477 2.9e-20 103.2 144 42.4
Ciclev10010959m.g Citrus clementina HOM05D005384 ORTHO05D006477 3.8e-20 102.8 116 48.3
Glyma.08G266700 Glycine max HOM05D005384 ORTHO05D006477 5.0e-20 102.4 118 45.8
Sed0018353 Sechium edule HOM05D005384 ORTHO05D006477 5.0e-20 102.4 110 49.1
TPR.G28960 Trifolium pratense HOM05D005384 ORTHO05D006477 5.0e-20 102.4 82 56.1
vmacro14142 Vaccinium macrocarpon HOM05D005384 ORTHO05D006477 5.0e-20 102.4 108 48.1
Cpa.g.sc765.1 Carica papaya HOM05D005384 ORTHO05D006477 6.5e-20 102.1 89 53.9
Lj4g0003244 Lotus japonicus HOM05D005384 ORTHO05D006477 6.5e-20 102.1 106 48.1
Medtr8g070990 Medicago truncatula HOM05D005384 ORTHO05D006477 6.5e-20 102.1 106 48.1
RcHm_v2.0_Chr1g0329501 Rosa chinensis HOM05D005384 ORTHO05D006477 6.5e-20 102.1 99 51.5
Cc04_g13050 Coffea canephora HOM05D005384 ORTHO05D006477 8.5e-20 101.7 107 46.7
Phvul.003G273500 Phaseolus vulgaris HOM05D005384 ORTHO05D006477 8.5e-20 101.7 132 43.9
Psat4g111160 Pisum sativum HOM05D005384 ORTHO05D006477 8.5e-20 101.7 106 48.1
ClCG01G008440 Citrullus lanatus HOM05D005384 ORTHO05D006477 1.1e-19 101.3 109 46.8
CsaV3_5G020310 Cucumis sativus L. HOM05D005384 ORTHO05D006477 1.1e-19 101.3 109 46.8
FAN03G3298 Fragaria x ananassa HOM05D005384 ORTHO05D006477 1.1e-19 101.3 99 51.5
Lsat_1_v5_gn_3_16520 Lactuca sativa HOM05D005384 ORTHO05D006477 1.1e-19 101.3 82 54.9
Peaxi162Scf00084g00818 Petunia axillaris HOM05D005384 ORTHO05D006477 1.1e-19 101.3 107 47.7
Solyc08g077310.3 Solanum lycopersicum HOM05D005384 ORTHO05D006477 1.1e-19 101.3 110 47.3
Sopen08g025890 Solanum pennellii HOM05D005384 ORTHO05D006477 1.1e-19 101.3 110 47.3
GSVIVG01013204001 Vitis vinifera HOM05D005384 ORTHO05D006477 1.4e-19 100.9 110 47.3
CSS0000239 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 1.9e-19 100.5 108 48.1
CSS0043592 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 1.9e-19 100.5 108 48.1
Dinv07851 Davidia involucrata HOM05D005384 ORTHO05D006477 1.9e-19 100.5 82 54.9
Eucgr.J01644 Eucalyptus grandis HOM05D005384 ORTHO05D006477 1.9e-19 100.5 106 48.1
Nitab4.5_0002055g0100 Nicotiana tabacum HOM05D005384 ORTHO05D006477 1.9e-19 100.5 110 47.3
Atru.chr1.2109 Acer truncatum HOM05D005384 ORTHO05D006477 2.5e-19 100.1 132 44.7
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 2.5e-19 100.1 110 49.1
Thecc.04G058100 Theobroma cacao HOM05D005384 ORTHO05D006477 3.2e-19 99.8 140 42.1
TAR636G3654 Trochodendron aralioides HOM05D005384 ORTHO05D006477 3.2e-19 99.8 82 56.1
CiPaw.04G049200 Carya illinoinensis HOM05D005384 ORTHO05D006477 4.2e-19 99.4 98 49.0
FAN10G2966 Fragaria x ananassa HOM05D005384 ORTHO05D006477 4.2e-19 99.4 115 46.1
Prupe.2G049800 Prunus persica HOM05D005384 ORTHO05D006477 4.2e-19 99.4 172 39.0
PGR042G2720 Punica granatum HOM05D005384 ORTHO05D006477 5.5e-19 99.0 107 47.7
TAR629G1600 Trochodendron aralioides HOM05D005384 ORTHO05D006477 5.5e-19 99.0 110 47.3
Gohir.D08G048500 Gossypium hirsutum HOM05D005384 ORTHO05D006477 7.2e-19 98.6 113 46.9
CSS0046614 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 9.4e-19 98.2 109 45.0
ECA246G0264 Erigeron canadensis HOM05D005384 ORTHO05D006477 9.4e-19 98.2 109 45.9
Gohir.A12G052600 Gossypium hirsutum HOM05D005384 ORTHO05D006477 9.4e-19 98.2 110 45.5
Gorai.008G054400 Gossypium raimondii HOM05D005384 ORTHO05D006477 9.4e-19 98.2 110 45.5
Manes.02G081900 Manihot esculenta HOM05D005384 ORTHO05D006477 9.4e-19 98.2 110 48.2
PSO724G0625 Papaver somniferum HOM05D005384 ORTHO05D006477 9.4e-19 98.2 179 38.5
VMungo0251G2756 Vigna mungo HOM05D005384 ORTHO05D006477 9.4e-19 98.2 132 42.4
Oeu054547.2 Olea europaea HOM05D005384 ORTHO05D006477 1.6e-18 97.4 110 46.4
DCAR_016228 Daucus carota HOM05D005384 ORTHO05D006477 2.1e-18 97.1 110 44.5
Gorai.004G048000 Gossypium raimondii HOM05D005384 ORTHO05D006477 2.1e-18 97.1 116 44.8
Sabra04G0054400 Salix brachista HOM05D005384 ORTHO05D006477 2.1e-18 97.1 108 49.1
CAN.G572.37 Capsicum annuum HOM05D005384 ORTHO05D006477 2.7e-18 96.7 123 42.3
Lalb_Chr05g0228951 Lupinus albus HOM05D005384 ORTHO05D006477 2.7e-18 96.7 116 44.8
Sabra17G0116500 Salix brachista HOM05D005384 ORTHO05D006477 2.7e-18 96.7 165 39.4
MSTRG.2272 Avicennia marina HOM05D005384 ORTHO05D006477 3.6e-18 96.3 82 52.4
MD00G1152000 Malus domestica HOM05D005384 ORTHO05D006477 3.6e-18 96.3 162 41.4
MD02G1270000 Malus domestica HOM05D005384 ORTHO05D006477 3.6e-18 96.3 170 38.2
PSO063G3637 Papaver somniferum HOM05D005384 ORTHO05D006477 3.6e-18 96.3 162 38.9
Aqoxy3G02532 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 4.7e-18 95.9 127 40.9
Sabra17G0113100 Salix brachista HOM05D005384 ORTHO05D006477 4.7e-18 95.9 165 39.4
Sabra17G0115200 Salix brachista HOM05D005384 ORTHO05D006477 4.7e-18 95.9 165 39.4
Potri.017G138500 Populus trichocarpa HOM05D005384 ORTHO05D006477 6.1e-18 95.5 110 46.4
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 8.0e-18 95.1 172 39.0
Hund21526 Selenicereus undatus HOM05D005384 ORTHO05D006477 8.0e-18 95.1 113 43.4
Ah.14g086470 Amaranthus hybridus HOM05D005384 ORTHO05D006477 1.0e-17 94.7 81 53.1
COL.COLO4_24446 Corchorus olitorius HOM05D005384 ORTHO05D006477 1.0e-17 94.7 116 43.1
Glyma.16G102300 Glycine max HOM05D005384 ORTHO05D006477 1.0e-17 94.7 116 44.8
Gohir.A08G038300 Gossypium hirsutum HOM05D005384 ORTHO05D006477 1.0e-17 94.7 116 43.1
Lalb_Chr16g0391981 Lupinus albus HOM05D005384 ORTHO05D006477 1.4e-17 94.4 119 43.7
PSO782G4681 Papaver somniferum HOM05D005384 ORTHO05D006477 1.4e-17 94.4 162 40.7
Actinidia22110 Actinidia chinensis HOM05D005384 ORTHO05D006477 1.8e-17 94.0 139 41.7
Migut.E00282 Erythranthe guttata HOM05D005384 ORTHO05D006477 1.8e-17 94.0 98 45.9
SEGI_21581 Sequoiadendron giganteum HOM05D005384 ORTHO05D006477 1.8e-17 94.0 114 44.7
Sc22g0001400 Simmondsia chinensis HOM05D005384 ORTHO05D006477 1.8e-17 94.0 83 50.6
Aqoxy2G03702_Aqoxy2G03703 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 3.9e-17 92.8 127 40.2
EL10Ac8g19736 Beta vulgaris HOM05D005384 ORTHO05D006477 3.9e-17 92.8 81 51.9
Gohir.D12G051100 Gossypium hirsutum HOM05D005384 ORTHO05D006477 3.9e-17 92.8 140 38.6
Oeu024119.2 Olea europaea HOM05D005384 ORTHO05D006477 6.7e-17 92.0 136 41.2
SMO367G0074 Selaginella moellendorffii HOM05D005384 ORTHO05D006477 8.8e-17 91.7 135 39.3
Zm00001eb306360 Zea mays HOM05D005384 ORTHO05D006477 8.8e-17 91.7 103 42.7
BcaNung06989 Brassica carinata HOM05D005384 ORTHO05D006477 2.0e-16 90.5 127 42.5
Pp3c10_21700 Physcomitrium patens HOM05D005384 ORTHO05D006477 2.0e-16 90.5 138 39.1
AUR62030216 Chenopodium quinoa HOM05D005384 ORTHO05D006477 2.6e-16 90.1 81 51.9
Os02g0167500 Oryza sativa ssp. japonica HOM05D005384 ORTHO05D006477 4.4e-16 89.4 122 36.9
Mapoly0005s0121 Marchantia polymorpha HOM05D005384 ORTHO05D006477 5.7e-16 89.0 100 44.0
Sp5g08170 Schrenkiella parvula HOM05D005384 ORTHO05D006477 1.3e-15 87.8 107 41.1
CDE06G0914 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 2.2e-15 87.0 113 42.5
AUR62027521 Chenopodium quinoa HOM05D005384 ORTHO05D006477 3.7e-15 86.3 76 53.9
CDE12G0199 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 4.8e-15 85.9 115 41.7
BolC8t50551H Brassica oleracea HOM05D005384 ORTHO05D006477 6.3e-15 85.5 81 46.9
Carub.0005s2082 Capsella rubella HOM05D005384 ORTHO05D006477 1.1e-14 84.7 81 45.7
Pp3c20_21810 Physcomitrium patens HOM05D005384 ORTHO05D006477 3.1e-14 83.2 106 39.6
THA.LOC104801042 Tarenaya hassleriana HOM05D005384 ORTHO05D006477 3.1e-14 83.2 162 35.2
A09p47220 Brassica napus HOM05D005384 ORTHO05D006477 4.1e-14 82.8 110 39.1
Aa31LG10G6030 Aethionema arabicum HOM05D005384 ORTHO05D006477 9.1e-14 81.6 140 35.0
BraA09t40184Z Brassica rapa HOM05D005384 ORTHO05D006477 9.1e-14 81.6 116 37.9
Thhalv10010093m.g Eutrema salsugineum HOM05D005384 ORTHO05D006477 9.1e-14 81.6 140 33.6
C08p29480 Brassica napus HOM05D005384 ORTHO05D006477 1.2e-13 81.3 116 37.1
AL5G35270 Arabidopsis lyrata HOM05D005384 ORTHO05D006477 3.5e-13 79.7 140 33.6
Zm00001eb361710 Zea mays HOM05D005384 ORTHO05D006477 3.5e-13 79.7 82 45.1
CARHR164150 Cardamine hirsuta HOM05D005384 ORTHO05D006477 4.5e-13 79.3 140 32.1
Aa31LG10G8980 Aethionema arabicum HOM05D005384 ORTHO05D006477 5.9e-13 79.0 81 45.7
SGA_v2.0_scaffold14G06795 Striga asiatica HOM05D005384 ORTHO05D006477 1.7e-12 77.4 115 37.4
AagrBONN_evm.TU.Sc2ySwM_228.1178 Anthoceros agrestis HOM05D005384 ORTHO05D006477 3.8e-12 76.3 125 36.0
AT3G54230 Arabidopsis thaliana HOM05D005384 ORTHO05D006477 1.5e-11 74.3 68 48.5
SMO351G0487 Selaginella moellendorffii HOM05D005384 ORTHO05D006477 2.5e-11 73.6 137 35.8
unitig_21.g20863 Utricularia gibba HOM05D005384 ORTHO05D006477 5.2e-09 65.9 71 46.5


User provided reference genes

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