Gene: Ah.14g086470

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.14g086470
  • Transcript Identifier Ah.14g086470-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_14 : 18386964-18395583 : negative

Gene Family Information

  • ID HOM05D005384
  • #Genes/#Species 141/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.14g086470-v1.1.a1

Descriptions

  • Description SUPPRESSOR OF ABI3-5 (REQUIRED FOR SNC4-1D protein 1) (Splicing factor SUA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT3G54230
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT3G54230
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT3G54230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G54230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G54230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000467 G-patch domain
IPR035979 RNA-binding domain superfamily
IPR001876 Zinc finger, RanBP2-type
IPR035623 SUA-like, OCRE domain
IPR000504 RNA recognition motif domain
IPR003954 RNA recognition motif domain, eukaryote
IPR041591 OCRE domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036443 Zinc finger, RanBP2-type superfamily
Mapman id Description
35.1 not assigned.annotated