Gene: Os02g0167500
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os02g0167500
- Transcript Identifier Os02t0167500-02
- Gene Type Coding gene
- Location chr02 : 3623840-3630388 : negative
Gene Family Information
- ID HOM05D005384
- #Genes/#Species 141/88
- Phylogenetic origin
- ID ORTHO05D006477
- #Genes/#Species 142/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os02t0167500-02
- MSU-ID LOC_Os02g07070.2
- MSU-ID LOC_Os02g07070.3
- MSU-ID LOC_Os02g07070.1
- symbol LowAC1
- name low amylose content 1
- uniprot Q6H4V8
Descriptions
- Description RNA recognition motif domain domain containing protein.
- Description RNA recognition motif protein, Regulatory factor for starch synthesis
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043484 | ISO | PLAZA Integrative Orthology | regulation of RNA splicing | AT3G54230 |
| GO:0006397 | ISO | PLAZA Integrative Orthology | mRNA processing | AT3G54230 |
| GO:0000398 | ISO | PLAZA Integrative Orthology | mRNA splicing, via spliceosome | AT3G54230 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G54230 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G54230 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR001876 | Zinc finger, RanBP2-type |
| IPR041591 | OCRE domain |
| IPR036443 | Zinc finger, RanBP2-type superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035623 | SUA-like, OCRE domain |
| IPR000467 | G-patch domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |