Gene: ATR0743G115

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0743G115
  • Transcript Identifier ATR0743G115.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00066 : 1032380-1040705 : positive

Gene Family Information

  • ID HOM05D005384
  • #Genes/#Species 141/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00066.69.v1.0
  • pacid 31564073

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT3G54230
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT3G54230
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT3G54230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G54230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G54230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR001876 Zinc finger, RanBP2-type
IPR000467 G-patch domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR041591 OCRE domain
IPR035623 SUA-like, OCRE domain
Mapman id Description
35.1 not assigned.annotated