Gene: Solyc08g077310.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g077310.3
  • Transcript Identifier Solyc08g077310.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 59317536-59327837 : positive

Gene Family Information

  • ID HOM05D005384
  • #Genes/#Species 141/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g077310.3.1
  • uniprot A0A3Q7HRI7
  • gene_id Solyc08g077310

Descriptions

  • Description Suppressor of abi3-5 (AHRD V3.3 *** A0A1I9LMI4_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT3G54230
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT3G54230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G54230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041591 OCRE domain
IPR035623 SUA-like, OCRE domain
IPR000467 G-patch domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036443 Zinc finger, RanBP2-type superfamily
IPR035979 RNA-binding domain superfamily
IPR001876 Zinc finger, RanBP2-type
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated