Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4202 Papaver somniferum HOM05D006093 ORTHO05D007652 6.6e-116 421.0 260 100.0
PSO170G6797 Papaver somniferum HOM05D006093 ORTHO05D007652 7.8e-109 397.5 260 87.7
Thecc.06G031100 Theobroma cacao HOM05D006093 ORTHO05D007652 1.6e-77 293.5 176 82.4
Atru.chr1.2881 Acer truncatum HOM05D006093 ORTHO05D007652 2.3e-76 289.7 184 79.3
COL.COLO4_11898 Corchorus olitorius HOM05D006093 ORTHO05D007652 3.0e-76 289.3 176 81.2
Duzib235G0399 Durio zibethinus HOM05D006093 ORTHO05D007652 5.1e-76 288.5 188 78.2
Ciclev10025737m.g Citrus clementina HOM05D006093 ORTHO05D007652 3.3e-75 285.8 190 74.7
Gohir.D10G082500 Gossypium hirsutum HOM05D006093 ORTHO05D007652 5.7e-75 285.0 176 80.7
Manes.11G058700 Manihot esculenta HOM05D006093 ORTHO05D007652 9.7e-75 284.3 184 77.7
Eucgr.F03905 Eucalyptus grandis HOM05D006093 ORTHO05D007652 1.6e-74 283.5 175 80.0
Lj3g0003829 Lotus japonicus HOM05D006093 ORTHO05D007652 2.8e-74 282.7 191 73.8
Cfa001944 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.1e-73 280.8 175 80.0
Lj5A75T43 Lonicera japonica HOM05D006093 ORTHO05D007652 1.1e-73 280.8 175 78.3
Sc10g0008130 Simmondsia chinensis HOM05D006093 ORTHO05D007652 1.4e-73 280.4 174 77.6
TAR626G1009 Trochodendron aralioides HOM05D006093 ORTHO05D007652 4.1e-73 278.9 180 77.8
Actinidia08791 Actinidia chinensis HOM05D006093 ORTHO05D007652 5.3e-73 278.5 184 76.1
Lalb_Chr24g0395421 Lupinus albus HOM05D006093 ORTHO05D007652 6.9e-73 278.1 190 73.2
CSS0022367 Camellia sinensis var. sinensis HOM05D006093 ORTHO05D007652 9.0e-73 277.7 204 70.6
PGSC0003DMG400014146 Solanum tuberosum HOM05D006093 ORTHO05D007652 3.4e-72 275.8 168 80.4
Potri.003G031100 Populus trichocarpa HOM05D006093 ORTHO05D007652 5.9e-72 275.0 176 77.8
MBI15_g24195_MAGBIO Magnolia biondii HOM05D006093 ORTHO05D007652 1.3e-71 273.9 175 75.4
Nitab4.5_0010806g0010 Nicotiana tabacum HOM05D006093 ORTHO05D007652 1.3e-71 273.9 168 78.0
Carub.0001s4146 Capsella rubella HOM05D006093 ORTHO05D007652 1.7e-71 273.5 183 76.5
EL10Ac9g21886 Beta vulgaris HOM05D006093 ORTHO05D007652 2.2e-71 273.1 176 77.8
CiPaw.01G249800 Carya illinoinensis HOM05D006093 ORTHO05D007652 2.2e-71 273.1 187 74.9
TPR.G37262 Trifolium pratense HOM05D006093 ORTHO05D007652 2.2e-71 273.1 191 72.8
HanXRQChr02g0033451 Helianthus annuus HOM05D006093 ORTHO05D007652 2.9e-71 272.7 176 76.1
A05p18970 Brassica napus HOM05D006093 ORTHO05D007652 3.8e-71 272.3 168 80.4
BraA05t20794Z Brassica rapa HOM05D006093 ORTHO05D007652 3.8e-71 272.3 168 80.4
BcaC08g43998 Brassica carinata HOM05D006093 ORTHO05D007652 5.0e-71 271.9 182 75.8
MSTRG.11153 Avicennia marina HOM05D006093 ORTHO05D007652 6.5e-71 271.6 175 78.3
Sp1g39050 Schrenkiella parvula HOM05D006093 ORTHO05D007652 6.5e-71 271.6 183 75.4
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea HOM05D006093 ORTHO05D007652 8.5e-71 271.2 176 76.7
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea HOM05D006093 ORTHO05D007652 8.5e-71 271.2 176 76.7
Glyma.13G366800 Glycine max HOM05D006093 ORTHO05D007652 1.1e-70 270.8 188 73.4
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla HOM05D006093 ORTHO05D007652 1.1e-70 270.8 184 74.5
BolC6t36581H Brassica oleracea HOM05D006093 ORTHO05D007652 1.9e-70 270.0 182 75.3
Gohir.A10G068900 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.9e-70 270.0 182 76.4
AT1G52500 Arabidopsis thaliana HOM05D006093 ORTHO05D007652 2.5e-70 269.6 183 76.0
THA.LOC104818014 Tarenaya hassleriana HOM05D006093 ORTHO05D007652 3.2e-70 269.2 168 78.0
Solyc03g117510.4 Solanum lycopersicum HOM05D006093 ORTHO05D007652 1.2e-69 267.3 168 78.6
Sopen03g036410 Solanum pennellii HOM05D006093 ORTHO05D007652 1.2e-69 267.3 168 78.6
BcaB02g10988 Brassica carinata HOM05D006093 ORTHO05D007652 2.1e-69 266.5 168 78.6
Haze_16582 Corylus avellana HOM05D006093 ORTHO05D007652 2.1e-69 266.5 182 74.7
Medtr2g104100 Medicago truncatula HOM05D006093 ORTHO05D007652 2.1e-69 266.5 186 72.6
Thhalv10011553m.g Eutrema salsugineum HOM05D006093 ORTHO05D007652 4.6e-69 265.4 167 79.6
AUR62011503 Chenopodium quinoa HOM05D006093 ORTHO05D007652 1.0e-68 264.2 171 78.9
ATR0800G026 Amborella trichopoda HOM05D006093 ORTHO05D007652 1.3e-68 263.8 200 68.0
FAN09G4542 Fragaria x ananassa HOM05D006093 ORTHO05D007652 1.8e-68 263.5 189 72.0
AUR62016319 Chenopodium quinoa HOM05D006093 ORTHO05D007652 3.0e-68 262.7 195 71.3
RcHm_v2.0_Chr2g0134861 Rosa chinensis HOM05D006093 ORTHO05D007652 3.0e-68 262.7 189 71.4
Migut.I00747 Erythranthe guttata HOM05D006093 ORTHO05D007652 3.9e-68 262.3 191 71.7
Gorai.011G089400 Gossypium raimondii HOM05D006093 ORTHO05D007652 5.1e-68 261.9 227 62.1
MD17G1215000 Malus domestica HOM05D006093 ORTHO05D007652 5.1e-68 261.9 167 76.6
FvH4_6g29401 Fragaria vesca HOM05D006093 ORTHO05D007652 6.7e-68 261.5 189 71.4
FAN14G2225 Fragaria x ananassa HOM05D006093 ORTHO05D007652 6.7e-68 261.5 189 71.4
VMungo1080G1109 Vigna mungo HOM05D006093 ORTHO05D007652 6.7e-68 261.5 194 68.0
ECA238G2964 Erigeron canadensis HOM05D005083 ORTHO05D006310 8.7e-68 261.2 186 68.8
vmacro16879 Vaccinium macrocarpon HOM05D006093 ORTHO05D007652 1.1e-67 260.8 216 63.9
HPP92_003851 Vanilla planifolia HOM05D006093 ORTHO05D007652 1.9e-67 260.0 186 69.9
Cc04_g04560 Coffea canephora HOM05D006093 ORTHO05D007652 4.3e-67 258.8 166 76.5
Sed0013008 Sechium edule HOM05D006093 ORTHO05D007652 1.3e-66 257.3 183 70.5
QL05p032033 Quercus lobata HOM05D006093 ORTHO05D007652 1.7e-66 256.9 225 61.3
CANSAT56G0666 Cannabis sativa HOM05D006093 ORTHO05D007652 1.1e-65 254.2 178 71.9
CDE05G1298 Ceratophyllum demersum HOM05D006093 ORTHO05D007652 1.4e-65 253.8 188 68.6
CsaV3_4G001910 Cucumis sativus L. HOM05D006093 ORTHO05D007652 1.4e-65 253.8 186 68.3
FAN05G1370 Fragaria x ananassa HOM05D006093 ORTHO05D007652 4.1e-65 252.3 197 68.5
Aa31LG10G2500 Aethionema arabicum HOM05D006093 ORTHO05D007652 1.2e-64 250.8 206 65.5
Cpa.g.sc167.9 Carica papaya HOM05D006093 ORTHO05D007652 7.7e-64 248.1 148 79.7
TWI12G0620 Tripterygium wilfordii HOM05D006093 ORTHO05D007652 2.9e-63 246.1 205 65.9
Ca_01048_v3 Cicer arietinum L. HOM05D006093 ORTHO05D007652 1.4e-62 243.8 205 62.0
SalBow2G3638 Salvia bowleyana HOM05D006093 ORTHO05D007652 1.2e-61 240.7 208 62.0
CAN.G407.11 Capsicum annuum HOM05D006093 ORTHO05D007652 3.6e-61 239.2 198 64.1
unitig_62.g23594 Utricularia gibba HOM05D006093 ORTHO05D007652 4.6e-61 238.8 237 55.3
Peaxi162Scf00553g00627 Petunia axillaris HOM05D006093 ORTHO05D007652 1.8e-60 236.9 221 58.8
Os08g0304900 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 6.7e-60 235.0 195 63.6
Phvul.005G179300 Phaseolus vulgaris HOM05D006093 ORTHO05D007652 8.8e-60 234.6 205 63.4
Hund00502 Selenicereus undatus HOM05D006093 ORTHO05D007652 1.1e-59 234.2 141 80.1
Os06g0643600 Oryza sativa ssp. japonica HOM05D006093 ORTHO05D007652 3.3e-59 232.6 198 62.6
Rhsim12G0190000 Rhododendron simsii HOM05D006093 ORTHO05D007652 2.2e-58 229.9 224 57.1
Dinv30625 Davidia involucrata HOM05D006093 ORTHO05D007652 1.1e-57 227.6 181 65.7
Zm00001eb275260 Zea mays HOM05D006093 ORTHO05D007652 1.8e-57 226.9 185 64.3
DCAR_025523 Daucus carota HOM05D006093 ORTHO05D007652 3.8e-55 219.2 176 66.5
ECA247G0880 Erigeron canadensis HOM05D006093 ORTHO05D007652 3.8e-55 219.2 190 60.5
Manes.04G110800 Manihot esculenta HOM05D006093 ORTHO05D007652 5.0e-55 218.8 184 65.8
Ah.01g020480 Amaranthus hybridus HOM05D006093 ORTHO05D007652 2.5e-54 216.5 191 62.8
HanXRQChr02g0033461 Helianthus annuus HOM05D006093 ORTHO05D007652 4.2e-54 215.7 172 64.0
Psat5g303120 Pisum sativum HOM05D006093 ORTHO05D007652 5.5e-54 215.3 230 53.5
ClCG07G012240 Citrullus lanatus HOM05D006093 ORTHO05D007652 7.2e-54 214.9 263 47.5
HanXRQChr02g0033471 Helianthus annuus HOM05D006093 ORTHO05D007652 1.2e-53 214.2 190 59.5
Sabra03G0017500 Salix brachista HOM05D006093 ORTHO05D007652 6.7e-52 208.4 260 50.0
MELO3C017842.2 Cucumis melo HOM05D006093 ORTHO05D007652 1.1e-49 201.1 199 53.3
Nn8g39568 Nelumbo nucifera HOM05D006093 ORTHO05D007652 1.1e-49 201.1 141 74.5
SHI11225 Sapria himalayana HOM05D006093 ORTHO05D007652 7.7e-48 194.9 200 53.5
SGA_v2.0_scaffold5G02719 Striga asiatica HOM05D006093 ORTHO05D007652 2.9e-47 193.0 191 55.5
GSVIVG01017379001 Vitis vinifera HOM05D006093 ORTHO05D007652 1.9e-46 190.3 126 73.0
PGR102G2220 Punica granatum HOM05D006093 ORTHO05D007652 3.2e-46 189.5 162 64.2
Lsat_1_v5_gn_1_34180 Lactuca sativa HOM05D006093 ORTHO05D007652 4.2e-46 189.1 212 50.5
Pp3c23_21520 Physcomitrium patens HOM05D006093 ORTHO05D007652 5.5e-46 188.7 187 53.5
Gohir.D10G074901 Gossypium hirsutum HOM05D006093 ORTHO05D007652 1.6e-45 187.2 121 76.0
Pp3c8_24280 Physcomitrium patens HOM05D006093 ORTHO05D007652 7.5e-43 178.3 168 51.8
Mapoly0015s0062 Marchantia polymorpha HOM05D006093 ORTHO05D007652 1.3e-42 177.6 180 52.8
Nitab4.5_0003072g0060 Nicotiana tabacum HOM05D006093 ORTHO05D007652 8.2e-42 174.9 203 49.8
Pp3c24_20180 Physcomitrium patens HOM05D006093 ORTHO05D007652 3.1e-41 172.9 190 48.4
CBR_g884 Chara braunii HOM05D006093 ORTHO05D007652 5.3e-41 172.2 162 51.9
AL1G60740 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 2.7e-37 159.8 103 78.6
CARHR042600 Cardamine hirsuta HOM05D006093 ORTHO05D007652 8.0e-37 158.3 103 77.7
SMO367G0330 Selaginella moellendorffii HOM05D006093 ORTHO05D007652 1.8e-36 157.1 132 61.4
Prupe.3G090700 Prunus persica HOM05D006093 ORTHO05D007652 2.6e-35 153.3 101 77.2
Cfa001945 Carpinus fangiana HOM05D006093 ORTHO05D007652 1.6e-32 144.1 112 66.1
Cre10.g428433 Chlamydomonas reinhardtii HOM05D006093 ORTHO05D007652 7.7e-32 141.7 173 45.1
Cfa026683 Carpinus fangiana HOM05D006093 ORTHO05D007652 8.9e-28 128.3 185 39.5
MCO15G481 Micromonas commoda HOM05D006093 ORTHO05D007652 1.1e-25 121.3 147 43.5
Psat6g066000 Pisum sativum HOM05D006093 ORTHO05D007652 3.1e-25 119.8 86 73.3
AL1G60750 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 5.4e-25 119.0 81 74.1
CARHR042620 Cardamine hirsuta HOM05D006093 ORTHO05D007652 9.2e-25 118.2 100 61.0
SEGI_39009 Sequoiadendron giganteum HOM05D006093 ORTHO05D007652 5.0e-23 112.5 76 71.1
SGA_v2.0_scaffold72G24067 Striga asiatica HOM05D006093 ORTHO05D007652 5.4e-17 92.4 109 47.7
AL7G45760 Arabidopsis lyrata HOM05D006093 ORTHO05D007652 1.6e-13 80.9 59 71.2
Thecc.09G173900 Theobroma cacao HOM05D006093 ORTHO05D007652 1.1e-09 68.2 62 58.1
Mapoly0071s0039 Marchantia polymorpha HOM05D016293 ORTHO05D018978 9.5e-06 55.1 73 38.4


User provided reference genes

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