Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006578 Prasinoderma coloniale HOM05D005620 ORTHO05D002193 1.3e-196 689.5 342 100.0
MCO07G069 Micromonas commoda HOM05D005620 ORTHO05D002193 1.0e-44 184.9 305 40.7
CBR_g30450 Chara braunii HOM05D005620 ORTHO05D002193 3.0e-39 166.8 302 37.1
Cre03.g175850 Chlamydomonas reinhardtii HOM05D005620 ORTHO05D002193 3.3e-38 163.3 320 39.1
Atru.chr1.1154_Atru.chr1.1155 Acer truncatum HOM05D005620 ORTHO05D002193 2.8e-37 160.2 314 37.6
Prupe.7G050000 Prunus persica HOM05D005620 ORTHO05D002193 4.7e-37 159.5 319 36.7
MD12G1086000 Malus domestica HOM05D005620 ORTHO05D002193 6.2e-37 159.1 338 36.1
RcHm_v2.0_Chr3g0484531 Rosa chinensis HOM05D005620 ORTHO05D002193 1.1e-36 158.3 299 38.5
Sc19g0008380 Simmondsia chinensis HOM05D005620 ORTHO05D002193 1.4e-36 157.9 336 37.2
AL4G39540 Arabidopsis lyrata HOM05D005620 ORTHO05D002193 2.3e-36 157.1 319 37.0
Sp4g23730 Schrenkiella parvula HOM05D005620 ORTHO05D002193 2.3e-36 157.1 319 36.7
Lj5g0010383 Lotus japonicus HOM05D005620 ORTHO05D002193 3.1e-36 156.8 338 35.8
AT2G41460 Arabidopsis thaliana HOM05D005620 ORTHO05D002193 4.0e-36 156.4 319 36.7
EL10Ac3g07159 Beta vulgaris HOM05D005620 ORTHO05D002193 4.0e-36 156.4 323 37.2
FvH4_6g24881 Fragaria vesca HOM05D005620 ORTHO05D002193 5.2e-36 156.0 299 38.8
Lj2A390T38 Lonicera japonica HOM05D005620 ORTHO05D002193 5.2e-36 156.0 323 35.9
Lalb_Chr02g0156421 Lupinus albus HOM05D005620 ORTHO05D002193 6.8e-36 155.6 337 34.1
MSTRG.10802 Avicennia marina HOM05D005620 ORTHO05D002193 8.9e-36 155.2 338 35.5
Carub.0004s2376 Capsella rubella HOM05D005620 ORTHO05D002193 8.9e-36 155.2 319 36.4
Migut.K00117 Erythranthe guttata HOM05D005620 ORTHO05D002193 8.9e-36 155.2 299 37.5
Aqoxy1G00331 Aquilegia oxysepala HOM05D005620 ORTHO05D002193 2.0e-35 154.1 319 36.4
Thhalv10016487m.g Eutrema salsugineum HOM05D005620 ORTHO05D002193 2.6e-35 153.7 319 37.0
THA.LOC104803289 Tarenaya hassleriana HOM05D002000 ORTHO05D002027 3.4e-35 153.3 338 34.9
A04p31630 Brassica napus HOM05D005620 ORTHO05D002193 5.8e-35 152.5 338 34.6
Cpa.g.sc120.9 Carica papaya HOM05D005620 ORTHO05D002193 5.8e-35 152.5 299 37.1
C04p69060 Brassica napus HOM05D005620 ORTHO05D002193 7.5e-35 152.1 338 34.6
Glyma.02G191100 Glycine max HOM05D005620 ORTHO05D002193 7.5e-35 152.1 338 34.6
CARHR136580 Cardamine hirsuta HOM05D005620 ORTHO05D002193 9.8e-35 151.8 322 36.0
Phvul.007G249300 Phaseolus vulgaris HOM05D005620 ORTHO05D002193 1.3e-34 151.4 336 33.9
Sc13g0001490 Simmondsia chinensis HOM05D005620 ORTHO05D002193 1.3e-34 151.4 317 36.3
Nn7g36440 Nelumbo nucifera HOM05D005620 ORTHO05D002193 1.7e-34 151.0 319 36.7
Potri.016G042000 Populus trichocarpa HOM05D005620 ORTHO05D002193 1.7e-34 151.0 338 36.7
ECA247G2062 Erigeron canadensis HOM05D005620 ORTHO05D002193 2.2e-34 150.6 338 35.5
Pp3c14_3710 Physcomitrium patens HOM05D005620 ORTHO05D002193 2.2e-34 150.6 303 36.0
TAR636G3531 Trochodendron aralioides HOM05D005620 ORTHO05D002193 2.2e-34 150.6 319 36.4
MELO3C009829.2 Cucumis melo HOM05D005620 ORTHO05D002193 2.9e-34 150.2 338 34.9
TWI53G0092 Tripterygium wilfordii HOM05D005620 ORTHO05D002193 2.9e-34 150.2 299 36.5
TWI53G0502 Tripterygium wilfordii HOM05D005620 ORTHO05D002193 2.9e-34 150.2 299 36.5
arahy.Tifrunner.gnm1.ann1.VNMU4U Arachis hypogaea HOM05D005620 ORTHO05D002193 3.7e-34 149.8 338 33.4
BcaB01g03467 Brassica carinata HOM05D005620 ORTHO05D002193 4.9e-34 149.4 319 35.4
Medtr1g051380 Medicago truncatula HOM05D005620 ORTHO05D002193 6.4e-34 149.1 338 34.6
Ciclev10005485m.g Citrus clementina HOM05D005620 ORTHO05D002193 8.3e-34 148.7 338 34.9
CsaV3_3G040940 Cucumis sativus L. HOM05D005620 ORTHO05D002193 8.3e-34 148.7 305 35.4
Mapoly0057s0088 Marchantia polymorpha HOM05D005620 ORTHO05D002193 8.3e-34 148.7 343 33.8
PSO339G1912 Papaver somniferum HOM05D005620 ORTHO05D002193 8.3e-34 148.7 319 35.1
Psat6g118160 Pisum sativum HOM05D005620 ORTHO05D002193 8.3e-34 148.7 338 34.3
HPP92_016888 Vanilla planifolia HOM05D005620 ORTHO05D002193 8.3e-34 148.7 305 36.4
CDE04G0757 Ceratophyllum demersum HOM05D005620 ORTHO05D002193 1.1e-33 148.3 320 35.3
Ca_25788_v3 Cicer arietinum L. HOM05D005620 ORTHO05D002193 1.1e-33 148.3 338 34.9
HanXRQChr10g0298661 Helianthus annuus HOM05D005620 ORTHO05D002193 1.1e-33 148.3 314 36.0
Actinidia09295 Actinidia chinensis HOM05D005620 ORTHO05D002193 1.4e-33 147.9 294 37.4
Eucgr.K01579 Eucalyptus grandis HOM05D005620 ORTHO05D002193 1.4e-33 147.9 299 37.1
Oeu023137.3 Olea europaea HOM05D005620 ORTHO05D002193 1.9e-33 147.5 338 35.2
C03p27780 Brassica napus HOM05D005620 ORTHO05D002193 2.4e-33 147.1 319 35.4
Lsat_1_v5_gn_9_32000 Lactuca sativa HOM05D005620 ORTHO05D002193 2.4e-33 147.1 319 36.7
Manes.09G016000 Manihot esculenta HOM05D005620 ORTHO05D002193 3.2e-33 146.7 312 36.5
Cfa016753 Carpinus fangiana HOM05D005620 ORTHO05D002193 4.1e-33 146.4 299 36.5
BcaC01g05336 Brassica carinata HOM05D005620 ORTHO05D002193 5.4e-33 146.0 318 34.9
A03p23280 Brassica napus HOM05D005620 ORTHO05D002193 5.4e-33 146.0 319 35.4
BolC3t15148H Brassica oleracea HOM05D005620 ORTHO05D002193 5.4e-33 146.0 318 34.9
BraA03t11547Z Brassica rapa HOM05D005620 ORTHO05D002193 5.4e-33 146.0 319 35.4
CSS0011392 Camellia sinensis var. sinensis HOM05D005620 ORTHO05D002193 1.2e-32 144.8 338 34.6
ClCG10G015520 Citrullus lanatus HOM05D005620 ORTHO05D002193 1.2e-32 144.8 326 33.7
CiPaw.09G042300 Carya illinoinensis HOM05D005620 ORTHO05D002193 1.6e-32 144.4 319 36.1
SMO145G0259 Selaginella moellendorffii HOM05D005620 ORTHO05D002193 1.6e-32 144.4 340 34.1
ATR0733G075 Amborella trichopoda HOM05D005620 ORTHO05D002193 2.1e-32 144.1 314 35.4
Thecc.05G145200 Theobroma cacao HOM05D005620 ORTHO05D002193 2.1e-32 144.1 303 36.3
Sed0006254 Sechium edule HOM05D005620 ORTHO05D002193 2.7e-32 143.7 319 34.8
COL.COLO4_21299 Corchorus olitorius HOM05D005620 ORTHO05D002193 4.6e-32 142.9 350 35.1
Os01g0801000 Oryza sativa ssp. japonica HOM05D005620 ORTHO05D002193 4.6e-32 142.9 376 32.2
AagrBONN_evm.TU.Sc2ySwM_369.93 Anthoceros agrestis HOM05D005620 ORTHO05D002193 1.0e-31 141.7 345 34.8
CANSAT80G0060 Cannabis sativa HOM05D005620 ORTHO05D002193 1.0e-31 141.7 299 35.8
CANSAT80G0759 Cannabis sativa HOM05D005620 ORTHO05D002193 1.0e-31 141.7 299 35.8
Solyc04g016530.3 Solanum lycopersicum HOM05D005620 ORTHO05D002193 1.3e-31 141.4 337 33.8
Sopen04g008610 Solanum pennellii HOM05D005620 ORTHO05D002193 2.3e-31 140.6 337 33.8
FAN05G4287 Fragaria x ananassa HOM05D005620 ORTHO05D002193 6.6e-31 139.0 299 35.8
BolC4t28403H Brassica oleracea HOM05D005620 ORTHO05D002193 1.5e-30 137.9 324 34.0
GSVIVG01033553001 Vitis vinifera HOM05D005620 ORTHO05D002193 1.9e-30 137.5 299 35.1
BraA04t18621Z Brassica rapa HOM05D005620 ORTHO05D002193 2.5e-30 137.1 324 34.6
Aa31LG1G23480 Aethionema arabicum HOM05D005620 ORTHO05D002193 4.3e-30 136.3 356 32.6
Gohir.A02G123602 Gossypium hirsutum HOM05D005620 ORTHO05D002193 4.3e-30 136.3 305 34.8
Sabra16G0047700 Salix brachista HOM05D005620 ORTHO05D002193 1.6e-29 134.4 315 35.6
Hund19124 Selenicereus undatus HOM05D005620 ORTHO05D002193 1.6e-29 134.4 264 36.4
Gorai.003G086400 Gossypium raimondii HOM05D005620 ORTHO05D002193 2.1e-29 134.0 338 33.7
Haze_26268 Corylus avellana HOM05D005620 ORTHO05D002193 4.7e-29 132.9 367 30.5
Gohir.D03G074900 Gossypium hirsutum HOM05D005620 ORTHO05D002193 1.8e-28 131.0 338 33.4
DCAR_019347 Daucus carota HOM05D005620 ORTHO05D002193 2.3e-28 130.6 305 33.1
Os01g0801100 Oryza sativa ssp. japonica HOM05D005620 ORTHO05D002193 3.1e-28 130.2 304 33.6
unitig_748.g7228 Utricularia gibba HOM05D005620 ORTHO05D002193 4.0e-28 129.8 261 35.6
MCO09G604 Micromonas commoda HOM05D005620 ORTHO05D002193 6.8e-28 129.0 316 32.3
Duzib128G2038 Durio zibethinus HOM05D005620 ORTHO05D002193 2.6e-27 127.1 321 33.6
Nitab4.5_0001618g0310 Nicotiana tabacum HOM05D005620 ORTHO05D002193 4.4e-27 126.3 338 33.1
Nitab4.5_0000826g0250 Nicotiana tabacum HOM05D005620 ORTHO05D002193 7.5e-27 125.6 338 32.8
QL07p005077 Quercus lobata HOM05D005620 ORTHO05D002193 3.7e-26 123.2 262 33.6
Cc06_g18370 Coffea canephora HOM05D005620 ORTHO05D002193 1.9e-25 120.9 299 33.1
Haze_19751 Corylus avellana HOM05D005620 ORTHO05D002193 3.2e-25 120.2 183 38.8
Thecc.K0006600 Theobroma cacao HOM05D005620 ORTHO05D002193 2.7e-24 117.1 245 36.7
AUR62024530 Chenopodium quinoa HOM05D005620 ORTHO05D002193 7.8e-24 115.5 260 35.8
CAN.G1237.2 Capsicum annuum HOM05D005620 ORTHO05D002193 1.7e-23 114.4 365 30.4
Peaxi162Scf00130g01016 Petunia axillaris HOM05D005620 ORTHO05D002193 8.6e-23 112.1 342 31.6
vmacro21954 Vaccinium macrocarpon HOM05D005620 ORTHO05D002193 1.9e-22 110.9 318 31.8
AUR62026122 Chenopodium quinoa HOM05D005620 ORTHO05D002193 9.5e-22 108.6 277 33.6
AL4G39920 Arabidopsis lyrata HOM05D005620 ORTHO05D002193 3.1e-20 103.6 243 34.2
CDE07G1402 Ceratophyllum demersum HOM05D005620 ORTHO05D002193 4.0e-20 103.2 277 33.6
Rhsim03G0031100 Rhododendron simsii HOM05D005620 ORTHO05D002193 1.2e-19 101.7 204 34.3
Aqoxy5G03576 Aquilegia oxysepala HOM05D005620 ORTHO05D002193 7.6e-19 99.0 202 37.1
arahy.Tifrunner.gnm1.ann1.K8ZQW4 Arachis hypogaea HOM05D005620 ORTHO05D002193 2.2e-18 97.4 354 28.2
SGA_v2.0_scaffold94G28513 Striga asiatica HOM05D005620 ORTHO05D002193 1.1e-17 95.1 197 36.5
SEGI_33391 Sequoiadendron giganteum HOM05D005620 ORTHO05D002193 3.2e-17 93.6 136 39.0
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 5.1e-15 86.3 291 27.1
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 4.7e-13 79.7 276 27.9
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 6.2e-13 79.3 281 25.6
Dinv30296 Davidia involucrata HOM05D005620 ORTHO05D002193 8.1e-13 79.0 177 35.6
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 8.1e-13 79.0 284 27.8
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 1.4e-12 78.2 271 25.8
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 5.3e-12 76.3 275 27.3
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 6.9e-12 75.9 276 26.1
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 1.2e-11 75.1 274 27.0
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 1.2e-11 75.1 271 25.8
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 1.2e-11 75.1 278 26.6
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 2.0e-11 74.3 273 25.6
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 2.0e-11 74.3 277 25.3
Pp3c3_16930 Physcomitrium patens HOM05D005767 ORTHO05D006785 3.4e-11 73.6 192 32.3
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 3.4e-11 73.6 281 25.6
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 4.4e-11 73.2 279 27.6
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 4.4e-11 73.2 270 25.6
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 7.6e-11 72.4 286 25.9
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 7.6e-11 72.4 273 25.6
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 7.6e-11 72.4 282 25.2
PGSC0003DMG402012723 Solanum tuberosum HOM05D005620 ORTHO05D002193 9.9e-11 72.0 129 37.2
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 1.7e-10 71.2 276 25.4
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 2.9e-10 70.5 287 25.8
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 2.9e-10 70.5 283 24.7
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 4.9e-10 69.7 281 24.6
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 4.9e-10 69.7 278 25.5
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 4.9e-10 69.7 282 25.5
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.4e-09 68.2 279 26.5
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 3.2e-09 67.0 294 26.2
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 4.2e-09 66.6 285 23.9
Zm00001eb408570 Zea mays HOM05D004043 ORTHO05D002193 9.3e-09 65.5 66 45.5
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 1.6e-08 64.7 274 24.5
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 2.1e-08 64.3 285 24.6
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 2.7e-08 63.9 280 25.4
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 6.0e-08 62.8 277 25.6
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 1.0e-07 62.0 275 24.4
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 1.7e-07 61.2 199 28.1
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 3.0e-07 60.5 167 28.1
MCO08G331 Micromonas commoda HOM05D005767 ORTHO05D006785 3.9e-07 60.1 210 28.6


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