Gene: BcaC01g05336
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaC01g05336
- Transcript Identifier BcaC01g05336
- Gene Type Coding gene
- Location ChrC01 : 59752032-59754372 : negative
Gene Family Information
- ID HOM05D005620
- #Genes/#Species 137/95
- Phylogenetic origin
- ID ORTHO05D002193
- #Genes/#Species 309/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0033683 | ISO | PLAZA Integrative Orthology | nucleotide-excision repair, DNA incision | AT2G41460 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G41460 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004518 | IEA | InterPro | nuclease activity | |
| GO:0008408 | ISO | PLAZA Integrative Orthology | 3'-5' exonuclease activity | AT2G41460 |
| GO:0004528 | ISO | PLAZA Integrative Orthology | phosphodiesterase I activity | AT2G41460 |
| GO:0016791 | ISO | PLAZA Integrative Orthology | phosphatase activity | AT2G41460 |
| GO:0003906 | ISO | PLAZA Integrative Orthology | DNA-(apurinic or apyrimidinic site) endonuclease activity | AT2G41460 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT2G41460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.5.10.3 | DNA damage response.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.AP-endonuclease (ARP) |