Gene: PGR119G2148

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR119G2148
  • Transcript Identifier PGR119G2148.02
  • Gene Type Coding gene
  • Location NC_045132.1 : 4828828-4833257 : negative

Gene Family Information

  • ID HOM05D005767
  • #Genes/#Species 135/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031402844.1
  • name LOC116212393
  • name XM_031546984.1
  • id gene-LOC116212393
  • uniprot A0A218XWG0

Descriptions

  • product DNA-(apurinic or apyrimidinic site) lyase 2, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT4G36050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0004527
ISO
PLAZA Integrative Orthologyexonuclease activity AT4G36050
GO:0046403
ISO
PLAZA Integrative Orthologypolynucleotide 3'-phosphatase activity AT4G36050

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005135 Endonuclease/exonuclease/phosphatase
IPR004808 AP endonuclease 1
IPR010666 Zinc finger, GRF-type
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
Mapman id Description
14.5.10.2 DNA damage response.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.AP-endonuclease (APE2)