Gene: AT2G41460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G41460
  • Transcript Identifier AT2G41460.3
  • Gene Type Coding gene
  • Location Chr2 : 17285731-17288769 : positive

Gene Family Information

  • ID HOM05D005620
  • #Genes/#Species 137/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G41460.3
  • symbol ARP
  • uniprot P45951

Descriptions

  • Description apurinic endonuclease-redox protein
  • Computational description apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: AP endonuclease, family 1, conserved site (InterPro:IPR020848), DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1 (InterPro:IPR000097), AP endonuclease, family 1, binding site (InterPro:IPR020847), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 8976 Blast hits to 8966 proteins in 2340 species: Archae - 119; Bacteria - 5352; Metazoa - 387; Fungi - 388; Plants - 165; Viruses - 2; Other Eukaryotes - 2563 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0016311
IEA
GOA Databasedephosphorylation
GO:0006284
IBA
Gene Ontologybase-excision repair1
GO:0045893
TAS
Gene Ontologypositive regulation of transcription, DNA-templated2
GO:0033683
IDA
Gene Ontologynucleotide-excision repair, DNA incision3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008311
IBA
Gene Ontologydouble-stranded DNA 3'-5' exodeoxyribonuclease activity1
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004528
IBA
GOA Databasephosphodiesterase I activity
GO:0004528
IDA
Gene Ontologyphosphodiesterase I activity3
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
Gene OntologyDNA binding
GO:0008081
IBA
Gene Ontologyphosphoric diester hydrolase activity1
GO:0003906
IDA
IBA
Gene OntologyDNA-(apurinic or apyrimidinic site) endonuclease activity1 2
GO:0016791
IDA
Gene Ontologyphosphatase activity3
GO:0008408
IDA
Gene Ontology3'-5' exonuclease activity3
GO:0004519
IEA
Gene Ontologyendonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0042644
IEA
GOA Databasechloroplast nucleoid
GO:0042644
IDA
Gene Ontologychloroplast nucleoid4
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005135 Endonuclease/exonuclease/phosphatase
IPR004808 AP endonuclease 1
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
IPR003034 SAP domain
IPR036361 SAP domain superfamily
Mapman id Description
14.5.10.3 DNA damage response.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.AP-endonuclease (ARP)