Gene: Pp3c14_3710

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c14_3710
  • Transcript Identifier Pp3c14_3710V3.2
  • Gene Type Coding gene
  • Location Chr14 : 2524941-2529332 : negative

Gene Family Information

  • ID HOM05D005620
  • #Genes/#Species 137/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c14_3710V3.2
  • pacid 32963141
  • alias Phpat.014G010900
  • alias Pp1s126_78V6
  • alias Phypa_136114
  • uniprot A0A2K1JG85

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G41460
GO:0033683
IEA
GOA Databasenucleotide-excision repair, DNA incision
GO:0006284
IBA
GOA Databasebase-excision repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0016311
IEA
GOA Databasedephosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003906
IBA
IEA
GOA DatabaseDNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0008408
IEA
GOA Database3'-5' exonuclease activity
GO:0016791
IEA
GOA Databasephosphatase activity
GO:0004528
IBA
IEA
GOA Databasephosphodiesterase I activity
GO:0008311
IBA
GOA Databasedouble-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042644
IEA
GOA Databasechloroplast nucleoid
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004808 AP endonuclease 1
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
IPR005135 Endonuclease/exonuclease/phosphatase
IPR036361 SAP domain superfamily
Mapman id Description
14.5.10.3 DNA damage response.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.AP-endonuclease (ARP)