Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400006710 Solanum tuberosum HOM05D001007 ORTHO05D029950 2.5e-53 211.8 107 100.0
PGSC0003DMG400020389 Solanum tuberosum HOM05D001007 ORTHO05D002932 1.1e-43 179.9 102 92.2
Solyc12g017860.3 Solanum lycopersicum HOM05D001007 ORTHO05D002932 3.1e-43 178.3 102 91.2
Sopen12g008680 Solanum pennellii HOM05D001007 ORTHO05D002932 3.1e-43 178.3 102 91.2
Nitab4.5_0004809g0060 Nicotiana tabacum HOM05D001007 ORTHO05D002932 1.0e-38 163.3 102 86.3
Nitab4.5_0005753g0010 Nicotiana tabacum HOM05D001007 ORTHO05D002932 1.0e-38 163.3 102 86.3
Peaxi162Scf00954g00227 Petunia axillaris HOM05D001007 ORTHO05D002932 1.1e-37 159.8 102 84.3
Peaxi162Scf00006g03312 Petunia axillaris HOM05D001007 ORTHO05D002932 3.3e-37 158.3 102 83.3
Sopen05g027830 Solanum pennellii HOM05D001007 ORTHO05D002932 5.6e-37 157.5 102 82.4
PGSC0003DMG400013698 Solanum tuberosum HOM05D001007 ORTHO05D002932 5.6e-37 157.5 102 82.4
Hma1.2p1_0263F.1_g105460 Hydrangea macrophylla HOM05D001007 ORTHO05D002932 9.6e-37 156.8 102 81.4
Nitab4.5_0005105g0010 Nicotiana tabacum HOM05D001007 ORTHO05D002932 3.6e-36 154.8 102 81.4
Solyc05g047520.4 Solanum lycopersicum HOM05D001007 ORTHO05D002932 4.7e-36 154.5 102 81.4
CSS0018446 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D002932 1.1e-35 153.3 102 76.5
Dinv12607 Davidia involucrata HOM05D001007 ORTHO05D002932 1.1e-35 153.3 102 79.4
Nitab4.5_0000404g0240 Nicotiana tabacum HOM05D001007 ORTHO05D002932 1.8e-35 152.5 102 80.4
CAN.G106.8 Capsicum annuum HOM05D001007 ORTHO05D002932 1.2e-34 149.8 102 81.4
Oeu062952.1 Olea europaea HOM05D001007 ORTHO05D002932 1.5e-34 149.4 102 75.5
Actinidia38524 Actinidia chinensis HOM05D001007 ORTHO05D002932 2.6e-34 148.7 102 75.5
vmacro22293 Vaccinium macrocarpon HOM05D001007 ORTHO05D002932 4.4e-34 147.9 102 77.5
Oeu028825.1 Olea europaea HOM05D001007 ORTHO05D002932 5.8e-34 147.5 102 76.5
Migut.J00836 Erythranthe guttata HOM05D001007 ORTHO05D002932 7.6e-34 147.1 102 75.5
Rhsim07G0245300 Rhododendron simsii HOM05D001007 ORTHO05D002932 7.6e-34 147.1 102 76.5
Nn5g27075 Nelumbo nucifera HOM05D001007 ORTHO05D002932 1.7e-33 146.0 102 74.5
Rhsim07G0245200 Rhododendron simsii HOM05D001007 ORTHO05D002932 2.9e-33 145.2 102 76.5
Cc00_g00180 Coffea canephora HOM05D001007 ORTHO05D002932 4.9e-33 144.4 102 74.5
TAR383G0411 Trochodendron aralioides HOM05D001007 ORTHO05D002932 4.9e-33 144.4 102 77.5
Lsat_1_v5_gn_5_81421 Lactuca sativa HOM05D001007 ORTHO05D002932 1.4e-32 142.9 102 73.5
DCAR_009044 Daucus carota HOM05D001007 ORTHO05D002932 2.4e-32 142.1 102 73.5
Hund19363 Selenicereus undatus HOM05D001007 ORTHO05D002932 2.4e-32 142.1 102 74.5
MSTRG.19396 Avicennia marina HOM05D001007 ORTHO05D002932 3.2e-32 141.7 102 73.5
Dinv26473 Davidia involucrata HOM05D001007 ORTHO05D002932 5.4e-32 141.0 102 73.5
HanXRQChr10g0309581 Helianthus annuus HOM05D001007 ORTHO05D002932 9.3e-32 140.2 102 75.5
Prupe.1G065000 Prunus persica HOM05D001007 ORTHO05D002932 1.6e-31 139.4 102 75.5
GSVIVG01032255001 Vitis vinifera HOM05D001007 ORTHO05D002932 2.1e-31 139.0 102 74.5
unitig_22.g6570 Utricularia gibba HOM05D001007 ORTHO05D002932 3.5e-31 138.3 102 71.6
EL10Ac2g03639 Beta vulgaris HOM05D001007 ORTHO05D002932 7.8e-31 137.1 102 71.6
MBI16_g37217_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D002932 1.0e-30 136.7 102 69.6
THA.LOC104815315 Tarenaya hassleriana HOM05D001007 ORTHO05D002932 1.3e-30 136.3 102 73.5
SalBow6G3558 Salvia bowleyana HOM05D001007 ORTHO05D002932 1.7e-30 136.0 102 67.6
Atru.chr12.1185 Acer truncatum HOM05D001007 ORTHO05D002932 3.0e-30 135.2 102 75.5
CiPaw.15G156200 Carya illinoinensis HOM05D001007 ORTHO05D002932 3.0e-30 135.2 102 70.6
ECA234G1918 Erigeron canadensis HOM05D001007 ORTHO05D002932 3.0e-30 135.2 102 70.6
HanXRQChr12g0359191 Helianthus annuus HOM05D001007 ORTHO05D002932 3.0e-30 135.2 102 72.5
Potri.006G078000 Populus trichocarpa HOM05D001007 ORTHO05D002932 3.0e-30 135.2 102 72.5
Aqoxy7G02671 Aquilegia oxysepala HOM05D001007 ORTHO05D002932 5.1e-30 134.4 102 68.6
MD13G1234200 Malus domestica HOM05D001007 ORTHO05D002932 5.1e-30 134.4 102 72.5
Sc23g0004350 Simmondsia chinensis HOM05D001007 ORTHO05D002932 5.1e-30 134.4 102 72.5
Thecc.09G194800 Theobroma cacao HOM05D001007 ORTHO05D002932 5.1e-30 134.4 102 70.6
MD16G1238700 Malus domestica HOM05D001007 ORTHO05D002932 6.6e-30 134.0 102 72.5
Ciclev10018695m.g Citrus clementina HOM05D001007 ORTHO05D002932 1.9e-29 132.5 102 70.6
AUR62028012 Chenopodium quinoa HOM05D001007 ORTHO05D002932 2.5e-29 132.1 102 68.6
QL11p008827 Quercus lobata HOM05D001007 ORTHO05D002932 2.5e-29 132.1 102 70.6
Sp3g08000 Schrenkiella parvula HOM05D001007 ORTHO05D002932 2.5e-29 132.1 102 70.6
PSO170G5833 Papaver somniferum HOM05D001007 ORTHO05D002932 3.3e-29 131.7 102 71.6
AUR62020712 Chenopodium quinoa HOM05D001007 ORTHO05D002932 5.6e-29 131.0 102 67.6
Gohir.A13G182000 Gossypium hirsutum HOM05D001007 ORTHO05D002932 7.3e-29 130.6 102 68.6
Gohir.D13G185200 Gossypium hirsutum HOM05D001007 ORTHO05D002932 7.3e-29 130.6 102 68.6
Manes.18G138900 Manihot esculenta HOM05D001007 ORTHO05D002932 7.3e-29 130.6 102 71.6
PSO063G7144 Papaver somniferum HOM05D001007 ORTHO05D002932 7.3e-29 130.6 102 70.6
CDE07G1513 Ceratophyllum demersum HOM05D001007 ORTHO05D002932 1.3e-28 129.8 101 64.4
Eucgr.C00066 Eucalyptus grandis HOM05D001007 ORTHO05D002932 1.3e-28 129.8 102 69.6
RcHm_v2.0_Chr4g0397751 Rosa chinensis HOM05D001007 ORTHO05D002932 1.3e-28 129.8 102 70.6
Haze_19057 Corylus avellana HOM05D001007 ORTHO05D002932 1.6e-28 129.4 102 67.6
Zm00001eb337140 Zea mays HOM05D001007 ORTHO05D002932 1.6e-28 129.4 102 69.6
Ah.10g033670 Amaranthus hybridus HOM05D001007 ORTHO05D002932 2.1e-28 129.0 104 69.2
CANSAT01G0746 Cannabis sativa HOM05D001007 ORTHO05D002932 2.1e-28 129.0 102 69.6
CARHR084080 Cardamine hirsuta HOM05D001007 ORTHO05D002932 2.8e-28 128.6 102 69.6
THA.LOC104808911 Tarenaya hassleriana HOM05D001007 ORTHO05D002932 4.8e-28 127.9 102 69.6
Cfa020741 Carpinus fangiana HOM05D001007 ORTHO05D002932 6.2e-28 127.5 102 66.7
Cpa.g.sc115.29 Carica papaya HOM05D001007 ORTHO05D002932 1.1e-27 126.7 104 68.3
FvH4_4g06170 Fragaria vesca HOM05D001007 ORTHO05D002932 1.1e-27 126.7 102 69.6
FAN12G0801 Fragaria x ananassa HOM05D001007 ORTHO05D002932 1.1e-27 126.7 102 69.6
FAN22G2217 Fragaria x ananassa HOM05D001007 ORTHO05D002932 1.1e-27 126.7 102 69.6
Gorai.013G211300 Gossypium raimondii HOM05D001007 ORTHO05D002932 1.1e-27 126.7 102 67.6
Aa31sc441G20 Aethionema arabicum HOM05D001007 ORTHO05D002932 1.4e-27 126.3 102 69.6
ATR0626G366 Amborella trichopoda HOM05D001007 ORTHO05D002932 2.4e-27 125.6 102 63.7
FAN07G1844 Fragaria x ananassa HOM05D001007 ORTHO05D002932 2.4e-27 125.6 102 69.6
Medtr8g101340 Medicago truncatula HOM05D001007 ORTHO05D002932 2.4e-27 125.6 102 68.6
TWI32G0842 Tripterygium wilfordii HOM05D001007 ORTHO05D002932 2.4e-27 125.6 102 68.6
ClCG11G011450 Citrullus lanatus HOM05D001007 ORTHO05D002932 3.1e-27 125.2 102 68.6
MELO3C003935.2 Cucumis melo HOM05D001007 ORTHO05D002932 3.1e-27 125.2 102 68.6
Thhalv10019987m.g Eutrema salsugineum HOM05D001007 ORTHO05D002932 3.1e-27 125.2 102 67.6
Lalb_Chr16g0390771 Lupinus albus HOM05D001007 ORTHO05D002932 4.0e-27 124.8 102 65.7
PGR142G2022 Punica granatum HOM05D001007 ORTHO05D002932 4.0e-27 124.8 102 67.6
HPP92_020237 Vanilla planifolia HOM05D001007 ORTHO05D002932 4.0e-27 124.8 102 65.7
Lju50A17G32 Lonicera japonica HOM05D001007 ORTHO05D002932 5.3e-27 124.4 103 69.9
Os11g0176200 Oryza sativa ssp. japonica HOM05D001007 ORTHO05D002932 5.3e-27 124.4 102 67.6
BolC5t34494H Brassica oleracea HOM05D001007 ORTHO05D002932 9.0e-27 123.6 102 68.6
Ca_17425_v3 Cicer arietinum L. HOM05D001007 ORTHO05D002932 9.0e-27 123.6 102 67.6
Ca_17434_v3 Cicer arietinum L. HOM05D001007 ORTHO05D002932 9.0e-27 123.6 102 67.6
Lj4g0027172 Lotus japonicus HOM05D001007 ORTHO05D002932 9.0e-27 123.6 102 66.7
CsaV3_2G009040 Cucumis sativus L. HOM05D001007 ORTHO05D002932 1.2e-26 123.2 102 67.6
RhsimUnG0051300 Rhododendron simsii HOM05D001007 ORTHO05D002932 1.2e-26 123.2 102 68.6
TPR.G25490 Trifolium pratense HOM05D001007 ORTHO05D002932 1.2e-26 123.2 102 66.7
BcaC05g29692 Brassica carinata HOM05D001007 ORTHO05D002932 2.0e-26 122.5 102 66.7
A05p39390 Brassica napus HOM05D001007 ORTHO05D002932 2.0e-26 122.5 102 66.7
C05p58420 Brassica napus HOM05D001007 ORTHO05D002932 2.0e-26 122.5 102 66.7
BraA05t22720Z Brassica rapa HOM05D001007 ORTHO05D002932 2.0e-26 122.5 102 66.7
arahy.Tifrunner.gnm1.ann1.612ZK0 Arachis hypogaea HOM05D001007 ORTHO05D002932 2.6e-26 122.1 102 65.7
arahy.Tifrunner.gnm1.ann1.N68NTR Arachis hypogaea HOM05D001007 ORTHO05D002932 2.6e-26 122.1 102 65.7
Lalb_Chr05g0223741 Lupinus albus HOM05D001007 ORTHO05D002932 3.4e-26 121.7 102 64.7
AT2G06990 Arabidopsis thaliana HOM05D001007 ORTHO05D002932 5.8e-26 120.9 102 65.7
Carub.0003s2734 Capsella rubella HOM05D001007 ORTHO05D002932 9.9e-26 120.2 102 64.7
AL3G43950 Arabidopsis lyrata HOM05D001007 ORTHO05D002932 1.3e-25 119.8 102 65.7
VMungo0251G0726 Vigna mungo HOM05D001007 ORTHO05D002932 1.3e-25 119.8 102 64.7
Glyma.08G027700 Glycine max HOM05D001007 ORTHO05D002932 2.9e-25 118.6 102 64.7
Sed0020596 Sechium edule HOM05D001007 ORTHO05D002932 1.4e-24 116.3 102 63.7
Psat7g021600 Pisum sativum HOM05D001007 ORTHO05D002932 4.2e-24 114.8 102 65.7
Mapoly0044s0084 Marchantia polymorpha HOM05D001007 ORTHO05D002932 9.3e-24 113.6 103 62.1
Glyma.05G221200 Glycine max HOM05D001007 ORTHO05D002932 1.2e-23 113.2 101 62.4
SEGI_09742 Sequoiadendron giganteum HOM05D001007 ORTHO05D000001 1.2e-23 113.2 102 59.8
SHI03120 Sapria himalayana HOM05D001007 ORTHO05D002932 4.6e-23 111.3 102 62.7
Phvul.002G303000 Phaseolus vulgaris HOM05D001007 ORTHO05D002932 7.9e-23 110.5 102 61.8
Pp3c10_7310 Physcomitrium patens HOM05D001007 ORTHO05D002932 1.1e-21 106.7 102 54.9
Medtr5g069360 Medicago truncatula HOM05D001007 ORTHO05D002932 9.9e-18 93.6 102 52.9
SMO358G0351 Selaginella moellendorffii HOM05D001007 ORTHO05D002932 1.3e-17 93.2 103 53.4
AagrBONN_evm.TU.Sc2ySwM_117.4055 Anthoceros agrestis HOM05D001007 ORTHO05D002932 3.5e-15 85.1 102 49.0
Sc23g0004700 Simmondsia chinensis HOM05D001007 ORTHO05D002932 3.0e-14 82.0 69 62.3
Sabra18G0127900 Salix brachista HOM05D001007 ORTHO05D029950 3.1e-11 72.0 102 52.0
EL10Ac8g19404 Beta vulgaris HOM05D001007 ORTHO05D010847 3.4e-10 68.6 66 57.6
CBR_g19459 Chara braunii HOM05D001007 ORTHO05D002932 5.5e-08 61.2 124 37.1


User provided reference genes

Program Settings