Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu047255.1 Olea europaea HOM05D000113 ORTHO05D001798 3.6e-45 184.5 90 100.0
Oeu044738.3 Olea europaea HOM05D000113 ORTHO05D001798 1.1e-14 83.2 77 62.3
Migut.D00061 Erythranthe guttata HOM05D000113 ORTHO05D001798 3.6e-13 78.2 42 90.5
MSTRG.21706 Avicennia marina HOM05D000113 ORTHO05D001798 1.4e-12 76.3 42 88.1
SGA_v2.0_scaffold376G50300 Striga asiatica HOM05D003220 ORTHO05D001798 3.1e-12 75.1 40 87.5
Cpa.g.sc18.90 Carica papaya HOM05D000113 ORTHO05D001798 6.9e-12 73.9 42 88.1
Thhalv10005810m.g Eutrema salsugineum HOM05D000113 ORTHO05D001798 6.9e-12 73.9 42 85.7
GSVIVG01028153001 Vitis vinifera HOM05D000113 ORTHO05D001798 9.0e-12 73.6 42 85.7
A03p25890 Brassica napus HOM05D000113 ORTHO05D001798 1.2e-11 73.2 42 85.7
BraA03t11805Z Brassica rapa HOM05D000113 ORTHO05D001798 1.2e-11 73.2 42 85.7
SalBow3G2721 Salvia bowleyana HOM05D000113 ORTHO05D001798 1.2e-11 73.2 42 81.0
Hund09659 Selenicereus undatus HOM05D000113 ORTHO05D001798 1.5e-11 72.8 42 85.7
Manes.01G230500 Manihot esculenta HOM05D000113 ORTHO05D001798 2.6e-11 72.0 42 83.3
THA.LOC104801312 Tarenaya hassleriana HOM05D000113 ORTHO05D001798 2.6e-11 72.0 47 74.5
EL10As5g23574 Beta vulgaris HOM05D000113 ORTHO05D001798 3.4e-11 71.6 42 83.3
HanXRQChr10g0284841 Helianthus annuus HOM05D000113 ORTHO05D001798 3.4e-11 71.6 42 83.3
Sp5g01080 Schrenkiella parvula HOM05D000113 ORTHO05D001798 3.4e-11 71.6 42 81.0
BcaC01g05039 Brassica carinata HOM05D000113 ORTHO05D001798 4.4e-11 71.2 42 83.3
C03p30870 Brassica napus HOM05D000113 ORTHO05D001798 4.4e-11 71.2 42 83.3
BolC3t15439H Brassica oleracea HOM05D000113 ORTHO05D001798 4.4e-11 71.2 42 83.3
SalBow3G2309 Salvia bowleyana HOM05D000113 ORTHO05D001798 4.4e-11 71.2 40 80.0
CARHR172650 Cardamine hirsuta HOM05D000113 ORTHO05D001798 5.8e-11 70.9 42 83.3
AUR62011762 Chenopodium quinoa HOM05D000113 ORTHO05D001798 5.8e-11 70.9 42 85.7
AUR62024608 Chenopodium quinoa HOM05D000113 ORTHO05D001798 5.8e-11 70.9 42 85.7
Eucgr.H00916 Eucalyptus grandis HOM05D000113 ORTHO05D001798 5.8e-11 70.9 42 83.3
Aa31LG10G16250 Aethionema arabicum HOM05D000113 ORTHO05D001798 7.6e-11 70.5 42 81.0
BcaC07g40716 Brassica carinata HOM05D000113 ORTHO05D001798 7.6e-11 70.5 42 81.0
A09p54310 Brassica napus HOM05D000113 ORTHO05D001798 7.6e-11 70.5 42 81.0
C08p37190 Brassica napus HOM05D000113 ORTHO05D001798 7.6e-11 70.5 42 81.0
BolC8t51296H Brassica oleracea HOM05D000113 ORTHO05D001798 7.6e-11 70.5 42 81.0
BraA09t40843Z Brassica rapa HOM05D000113 ORTHO05D001798 7.6e-11 70.5 42 81.0
Lalb_Chr18g0046561 Lupinus albus HOM05D000113 ORTHO05D001798 7.6e-11 70.5 47 74.5
Nn4g25530 Nelumbo nucifera HOM05D000113 ORTHO05D001798 7.6e-11 70.5 42 83.3
QL12p018947 Quercus lobata HOM05D000113 ORTHO05D001798 7.6e-11 70.5 41 80.5
Ah.11g049060 Amaranthus hybridus HOM05D000113 ORTHO05D001798 9.9e-11 70.1 42 81.0
Aqoxy2G02659 Aquilegia oxysepala HOM05D000113 ORTHO05D001798 9.9e-11 70.1 42 83.3
AL4G46820 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 9.9e-11 70.1 42 81.0
Cc06_g21350 Coffea canephora HOM05D000113 ORTHO05D001798 9.9e-11 70.1 42 81.0
Lalb_Chr04g0260021 Lupinus albus HOM05D000113 ORTHO05D001798 9.9e-11 70.1 47 72.3
vmacro15101 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 9.9e-11 70.1 42 78.6
Aqoxy5G02706 Aquilegia oxysepala HOM05D000113 ORTHO05D001798 1.3e-10 69.7 42 83.3
Cfa005756 Carpinus fangiana HOM05D000113 ORTHO05D001798 1.3e-10 69.7 42 78.6
CiPaw.08G087200 Carya illinoinensis HOM05D000113 ORTHO05D001798 1.3e-10 69.7 42 78.6
HanXRQChr15g0465091 Helianthus annuus HOM05D000113 ORTHO05D001798 1.3e-10 69.7 42 78.6
AT2G47250 Arabidopsis thaliana HOM05D000113 ORTHO05D001798 1.7e-10 69.3 42 81.0
ECA247G4117 Erigeron canadensis HOM05D000113 ORTHO05D001798 1.7e-10 69.3 42 81.0
Sabra14G0087400 Salix brachista HOM05D000113 ORTHO05D001798 1.7e-10 69.3 49 73.5
Carub.0005s2903 Capsella rubella HOM05D000113 ORTHO05D001798 2.2e-10 68.9 42 81.0
COL.COLO4_23195 Corchorus olitorius HOM05D000113 ORTHO05D001798 2.2e-10 68.9 42 81.0
Thecc.01G317900 Theobroma cacao HOM05D000113 ORTHO05D001798 2.2e-10 68.9 42 81.0
TAR362G0120 Trochodendron aralioides HOM05D000113 ORTHO05D001798 2.2e-10 68.9 42 78.6
CSS0009529 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 2.9e-10 68.6 42 81.0
Hma1.2p1_0408F.1_g146490 Hydrangea macrophylla HOM05D000113 ORTHO05D001798 2.9e-10 68.6 42 78.6
Medtr1g086640 Medicago truncatula HOM05D000113 ORTHO05D001798 2.9e-10 68.6 42 78.6
Actinidia20976 Actinidia chinensis HOM05D000113 ORTHO05D001798 3.8e-10 68.2 42 81.0
Ca_10267_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 3.8e-10 68.2 42 78.6
Lj1C14G13 Lonicera japonica HOM05D000113 ORTHO05D001798 3.8e-10 68.2 42 83.3
Lj8C411G3 Lonicera japonica HOM05D000113 ORTHO05D001798 3.8e-10 68.2 42 83.3
CANSAT25G2382 Cannabis sativa HOM05D000113 ORTHO05D001798 4.9e-10 67.8 42 78.6
Gohir.A12G123300 Gossypium hirsutum HOM05D000113 ORTHO05D001798 4.9e-10 67.8 42 78.6
Gohir.D12G126900 Gossypium hirsutum HOM05D000113 ORTHO05D001798 4.9e-10 67.8 42 78.6
Gorai.008G137800 Gossypium raimondii HOM05D000113 ORTHO05D001798 4.9e-10 67.8 42 78.6
Lj1g0014863 Lotus japonicus HOM05D000113 ORTHO05D001798 4.9e-10 67.8 42 78.6
PGR083G2294 Punica granatum HOM05D000113 ORTHO05D001798 4.9e-10 67.8 42 76.2
Dinv10125 Davidia involucrata HOM05D000113 ORTHO05D001798 6.4e-10 67.4 42 83.3
Duzib133G0211 Durio zibethinus HOM05D000113 ORTHO05D001798 6.4e-10 67.4 42 76.2
unitig_0.g287 Utricularia gibba HOM05D000113 ORTHO05D001798 6.4e-10 67.4 49 71.4
ATR0580G086 Amborella trichopoda HOM05D000113 ORTHO05D001798 8.4e-10 67.0 42 78.6
CsaV3_7G030160 Cucumis sativus L. HOM05D000113 ORTHO05D001798 8.4e-10 67.0 42 81.0
Duzib138G0646 Durio zibethinus HOM05D000113 ORTHO05D001798 8.4e-10 67.0 42 81.0
Peaxi162Scf00770g00115 Petunia axillaris HOM05D000113 ORTHO05D001798 8.4e-10 67.0 47 72.3
Potri.014G117900 Populus trichocarpa HOM05D000113 ORTHO05D001798 8.4e-10 67.0 42 81.0
Prupe.3G007400 Prunus persica HOM05D000113 ORTHO05D001798 8.4e-10 67.0 42 83.3
THA.LOC104802144 Tarenaya hassleriana HOM05D000113 ORTHO05D001798 8.4e-10 67.0 42 78.6
Actinidia17921 Actinidia chinensis HOM05D000113 ORTHO05D001798 1.1e-09 66.6 42 78.6
Actinidia21375 Actinidia chinensis HOM05D000113 ORTHO05D001798 1.1e-09 66.6 42 78.6
CAN.G293.10 Capsicum annuum HOM05D000113 ORTHO05D001798 1.1e-09 66.6 42 76.2
Lj5g0022853 Lotus japonicus HOM05D000113 ORTHO05D001798 1.1e-09 66.6 42 76.2
Solyc01g079250.3 Solanum lycopersicum HOM05D000113 ORTHO05D001798 1.1e-09 66.6 42 76.2
PGSC0003DMG400009019 Solanum tuberosum HOM05D000113 ORTHO05D001798 1.1e-09 66.6 42 76.2
arahy.Tifrunner.gnm1.ann1.GWA1LV Arachis hypogaea HOM05D000113 ORTHO05D001798 1.4e-09 66.2 42 73.8
arahy.Tifrunner.gnm1.ann1.WF8RVZ Arachis hypogaea HOM05D000113 ORTHO05D001798 1.4e-09 66.2 42 73.8
Glyma.02G010500 Glycine max HOM05D000113 ORTHO05D001798 1.4e-09 66.2 42 73.8
VMungo1383G0462 Vigna mungo HOM05D000113 ORTHO05D001798 1.4e-09 66.2 42 73.8
Lsat_1_v5_gn_9_2021 Lactuca sativa HOM05D000113 ORTHO05D001798 1.9e-09 65.9 42 76.2
AL2G23490 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 2.4e-09 65.5 43 79.1
AL5G45070 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 2.4e-09 65.5 43 79.1
AT3G62310 Arabidopsis thaliana HOM05D000113 ORTHO05D001798 2.4e-09 65.5 43 79.1
BcaC07g42743 Brassica carinata HOM05D000113 ORTHO05D001798 2.4e-09 65.5 43 76.7
Dinv33137 Davidia involucrata HOM05D000113 ORTHO05D001798 2.4e-09 65.5 42 78.6
Glyma.19G218200 Glycine max HOM05D000113 ORTHO05D001798 2.4e-09 65.5 42 73.8
Nitab4.5_0000222g0100 Nicotiana tabacum HOM05D000113 ORTHO05D001798 2.4e-09 65.5 42 73.8
Glyma.03G221200 Glycine max HOM05D000113 ORTHO05D001798 3.2e-09 65.1 42 71.4
PSO170G5018 Papaver somniferum HOM05D000113 ORTHO05D001798 3.2e-09 65.1 41 75.6
PSO357G0680 Papaver somniferum HOM05D000113 ORTHO05D001798 3.2e-09 65.1 41 75.6
TPR.G27315 Trifolium pratense HOM05D000113 ORTHO05D001798 3.2e-09 65.1 42 76.2
MD17G1278600 Malus domestica HOM05D000113 ORTHO05D001798 4.2e-09 64.7 42 78.6
MD09G1286000 Malus domestica HOM05D000113 ORTHO05D001798 5.4e-09 64.3 49 67.3
Rhsim13G0002600 Rhododendron simsii HOM05D000113 ORTHO05D001798 5.4e-09 64.3 42 73.8
BcaC07g42746 Brassica carinata HOM05D000113 ORTHO05D001798 7.1e-09 63.9 43 76.7
CDE09G1424 Ceratophyllum demersum HOM05D000113 ORTHO05D001798 7.1e-09 63.9 42 73.8
Sed0019361 Sechium edule HOM05D000113 ORTHO05D001798 7.1e-09 63.9 42 73.8
Sc17g0000280 Simmondsia chinensis HOM05D000113 ORTHO05D001798 7.1e-09 63.9 41 70.7
TAR636G1017 Trochodendron aralioides HOM05D000113 ORTHO05D001798 7.1e-09 63.9 42 78.6
vmacro02383 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 7.1e-09 63.9 42 76.2
vmacro15100 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 7.1e-09 63.9 42 69.0
Phvul.001G214700 Phaseolus vulgaris HOM05D000113 ORTHO05D001798 9.3e-09 63.5 42 71.4
HPP92_015246 Vanilla planifolia HOM05D000113 ORTHO05D001798 9.3e-09 63.5 42 69.0
MBI19_g03272_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D001798 1.2e-08 63.2 40 72.5
CiPaw.07G120200 Carya illinoinensis HOM05D000113 ORTHO05D001798 1.6e-08 62.8 42 71.4
FAN19G0603 Fragaria x ananassa HOM05D000113 ORTHO05D001798 1.6e-08 62.8 44 70.5
FvH4_1g26860 Fragaria vesca HOM05D000113 ORTHO05D001798 2.1e-08 62.4 42 73.8
FAN19G2799 Fragaria x ananassa HOM05D000113 ORTHO05D001798 2.1e-08 62.4 42 73.8
FAN23G3030 Fragaria x ananassa HOM05D000113 ORTHO05D001798 2.1e-08 62.4 42 73.8
FAN26G3197 Fragaria x ananassa HOM05D000113 ORTHO05D001798 2.1e-08 62.4 42 73.8
FAN28G1863 Fragaria x ananassa HOM05D000113 ORTHO05D001798 2.1e-08 62.4 42 73.8
FAN28G2361 Fragaria x ananassa HOM05D000113 ORTHO05D001798 2.1e-08 62.4 42 73.8
RcHm_v2.0_Chr3g0487101 Rosa chinensis HOM05D000113 ORTHO05D001798 2.1e-08 62.4 42 73.8
Ah.02g112530 Amaranthus hybridus HOM05D000113 ORTHO05D001798 2.7e-08 62.0 34 85.3
Medtr4g485610 Medicago truncatula HOM05D000113 ORTHO05D001798 2.7e-08 62.0 42 69.0
Rhsim06G0057400 Rhododendron simsii HOM05D000113 ORTHO05D001798 2.7e-08 62.0 39 76.9
Nn3g21785 Nelumbo nucifera HOM05D000113 ORTHO05D001798 7.8e-08 60.5 38 73.7
Ciclev10019038m.g Citrus clementina HOM05D000113 ORTHO05D001798 1.0e-07 60.1 42 73.8
TWI14G0282 Tripterygium wilfordii HOM05D000113 ORTHO05D001798 1.0e-07 60.1 42 73.8
CARHR142650 Cardamine hirsuta HOM05D000113 ORTHO05D001798 1.3e-07 59.7 42 71.4
VMungo0720G3092 Vigna mungo HOM05D000113 ORTHO05D001798 1.3e-07 59.7 31 87.1
QL04p067238 Quercus lobata HOM05D000113 ORTHO05D001798 1.7e-07 59.3 41 73.2
arahy.Tifrunner.gnm1.ann1.4I2ZCD Arachis hypogaea HOM05D000113 ORTHO05D001798 2.3e-07 58.9 42 66.7
arahy.Tifrunner.gnm1.ann1.L7YJN9 Arachis hypogaea HOM05D000113 ORTHO05D001798 2.3e-07 58.9 42 66.7
CDE02G3406 Ceratophyllum demersum HOM05D000113 ORTHO05D001798 2.3e-07 58.9 38 73.7
Mapoly0001s0447 Marchantia polymorpha HOM05D000113 ORTHO05D001798 2.3e-07 58.9 47 57.4
Zm00001eb395790 Zea mays HOM05D000113 ORTHO05D001798 3.0e-07 58.5 40 72.5
TWI59G0421 Tripterygium wilfordii HOM05D000113 ORTHO05D001798 5.1e-07 57.8 42 71.4
Atru.chr5.949 Acer truncatum HOM05D000113 ORTHO05D001798 8.7e-07 57.0 31 77.4
SEGI_02155 Sequoiadendron giganteum HOM05D000113 ORTHO05D001798 1.1e-06 56.6 42 69.0
Pp3c23_12820 Physcomitrium patens HOM05D000113 ORTHO05D001798 1.5e-06 56.2 41 61.0
Pp3c24_1890 Physcomitrium patens HOM05D000113 ORTHO05D001798 1.5e-06 56.2 41 61.0
Pp3s62_110 Physcomitrium patens HOM05D000113 ORTHO05D001798 1.5e-06 56.2 41 61.0
DCAR_005742 Daucus carota HOM05D000113 ORTHO05D001798 1.9e-06 55.8 42 66.7
ECA248G0894 Erigeron canadensis HOM05D000113 ORTHO05D001798 2.5e-06 55.5 47 59.6
Lsat_1_v5_gn_1_105061 Lactuca sativa HOM05D000113 ORTHO05D001798 2.5e-06 55.5 38 63.2
TAR633G1846 Trochodendron aralioides HOM05D000113 ORTHO05D001798 5.6e-06 54.3 31 77.4


User provided reference genes

Program Settings