Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 7.0e-110 400.6 197 100.0
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 1.8e-81 306.2 223 68.2
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 6.8e-81 304.3 224 67.9
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 2.6e-80 302.4 224 66.5
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.3e-79 300.1 224 67.0
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 2.4e-78 295.8 224 65.2
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 2.4e-78 295.8 225 66.7
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 5.4e-78 294.7 225 66.2
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 1.6e-77 293.1 225 66.2
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 2.1e-77 292.7 224 65.2
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 6.0e-77 291.2 224 64.7
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 3.0e-76 288.9 224 64.3
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 5.1e-76 288.1 224 62.5
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 6.6e-76 287.7 224 63.8
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.1e-75 287.0 224 64.7
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 1.1e-75 287.0 224 63.4
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 2.5e-75 285.8 224 63.8
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 1.2e-74 283.5 224 63.8
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 2.8e-74 282.3 225 62.2
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 4.7e-74 281.6 224 61.2
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 6.2e-74 281.2 223 62.3
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 6.2e-74 281.2 225 63.1
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 8.1e-74 280.8 225 65.8
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.4e-73 280.0 224 63.8
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 1.8e-73 279.6 224 62.1
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 1.8e-73 279.6 224 63.4
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 4.0e-73 278.5 225 62.7
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 4.0e-73 278.5 225 62.7
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 6.8e-73 277.7 224 63.4
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 9.9e-72 273.9 221 61.1
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 1.3e-71 273.5 221 62.0
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 1.7e-71 273.1 221 60.6
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 2.2e-71 272.7 224 59.4
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 2.9e-71 272.3 224 63.8
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 4.9e-71 271.6 225 59.6
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 1.4e-70 270.0 224 60.3
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 1.4e-70 270.0 221 61.1
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 2.4e-70 269.2 223 60.1
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 2.4e-70 269.2 228 57.5
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 9.3e-70 267.3 221 60.2
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 9.3e-70 267.3 221 59.3
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.6e-69 266.5 221 59.3
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.7e-69 265.8 227 59.9
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 2.7e-69 265.8 224 62.1
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 2.7e-69 265.8 224 59.8
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 4.6e-69 265.0 225 59.1
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 4.6e-69 265.0 219 61.6
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 4.6e-69 265.0 216 61.6
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 6.0e-69 264.6 227 59.9
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 3.0e-68 262.3 220 59.1
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 3.9e-68 261.9 224 56.2
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 6.6e-68 261.2 224 59.8
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 1.9e-67 259.6 238 57.1
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 3.3e-67 258.8 221 59.3
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 4.3e-67 258.5 222 59.0
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 9.6e-67 257.3 227 55.9
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 2.1e-66 256.1 226 58.4
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 2.8e-66 255.8 222 58.6
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 3.6e-66 255.4 224 58.0
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 6.2e-66 254.6 224 57.1
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 8.1e-66 254.2 203 64.0
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 1.4e-65 253.4 225 58.2
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 3.1e-65 252.3 223 57.0
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 4.0e-65 251.9 240 55.4
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 6.9e-65 251.1 221 57.5
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 9.0e-65 250.8 231 57.6
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 9.0e-65 250.8 231 57.6
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.0e-64 249.6 223 56.1
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.0e-64 249.6 223 56.5
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 2.6e-64 249.2 204 61.3
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 3.4e-64 248.8 221 56.1
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 4.4e-64 248.4 223 55.6
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 7.6e-64 247.7 204 60.8
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 1.3e-63 246.9 221 55.7
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.7e-63 246.5 223 55.6
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 1.7e-63 246.5 225 55.6
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.9e-63 245.7 223 56.1
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.8e-63 245.4 203 62.1
Oeu012677.3 Olea europaea HOM05D003786 ORTHO05D004375 4.9e-63 245.0 224 58.0
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 4.9e-63 245.0 224 57.1
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 6.4e-63 244.6 225 55.1
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 3.2e-62 242.3 232 52.2
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 5.4e-62 241.5 223 54.7
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 7.1e-62 241.1 224 54.0
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 7.1e-62 241.1 224 54.0
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 1.2e-61 240.4 233 53.2
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 1.2e-61 240.4 233 53.2
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.2e-61 240.4 223 54.7
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 1.2e-61 240.4 233 53.2
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 4.6e-61 238.4 205 58.5
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 7.8e-61 237.7 224 53.1
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 1.0e-60 237.3 231 55.8
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 1.7e-60 236.5 232 51.7
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 3.0e-60 235.7 228 53.9
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 5.1e-60 235.0 224 52.2
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 8.7e-60 234.2 224 53.1
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 1.1e-59 233.8 233 52.4
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 1.1e-59 233.8 226 52.2
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 2.5e-59 232.6 224 51.8
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 3.3e-59 232.3 228 52.6
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 4.3e-59 231.9 230 52.2
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 5.6e-59 231.5 235 53.2
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 5.6e-59 231.5 220 53.2
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 5.6e-59 231.5 232 50.9
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 7.3e-59 231.1 225 53.3
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 2.1e-58 229.6 206 57.3
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 2.8e-58 229.2 224 51.8
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 3.6e-58 228.8 228 51.3
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 6.2e-58 228.0 234 50.4
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 1.1e-57 227.3 224 52.2
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 1.1e-57 227.3 220 53.2
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.1e-57 227.3 216 52.8
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 3.1e-57 225.7 223 52.9
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 4.0e-57 225.3 226 53.1
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 4.0e-57 225.3 204 58.3
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 9.0e-57 224.2 229 52.4
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 9.0e-57 224.2 229 52.4
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 1.5e-56 223.4 203 55.2
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 2.0e-56 223.0 233 49.8
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 3.4e-56 222.2 225 51.6
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 9.9e-56 220.7 227 51.1
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 1.3e-55 220.3 226 51.3
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 1.7e-55 219.9 226 52.2
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 1.7e-55 219.9 226 52.2
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 2.2e-55 219.5 193 59.6
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 6.4e-55 218.0 225 49.3
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 8.4e-55 217.6 225 51.6
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.4e-54 216.9 226 51.3
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 1.9e-54 216.5 227 51.1
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 2.4e-54 216.1 224 51.3
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 4.2e-54 215.3 226 51.3
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 4.2e-54 215.3 226 50.4
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 1.2e-53 213.8 226 51.3
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 2.1e-53 213.0 226 49.6
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 6.0e-53 211.5 221 48.4
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 1.8e-52 209.9 226 48.2
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 5.1e-52 208.4 226 49.6
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 5.1e-52 208.4 247 47.8
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 8.7e-52 207.6 225 49.8
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 8.7e-52 207.6 225 49.8
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 9.6e-51 204.1 234 47.9
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 2.1e-50 203.0 222 48.6
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 5.3e-49 198.4 225 48.0
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 1.0e-47 194.1 214 48.1
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 4.2e-46 188.7 197 50.8
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 1.2e-45 187.2 219 46.1
Migut.I00236 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.7e-45 186.0 213 50.2
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 3.5e-45 185.7 220 48.2
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 3.0e-44 182.6 231 45.9
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 1.5e-43 180.3 173 52.6
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.5e-43 179.5 163 57.7
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 5.7e-43 178.3 173 57.2
Nitab4.5_0021870g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.1e-41 174.1 146 62.3
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 3.1e-41 172.6 185 48.6
TAR623G0784 Trochodendron aralioides HOM05D003786 ORTHO05D004375 4.5e-40 168.7 157 56.1
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 7.6e-40 167.9 157 55.4
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 4.2e-38 162.2 246 37.0
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 9.3e-38 161.0 225 42.7
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 1.6e-37 160.2 163 50.9
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 2.1e-37 159.8 233 41.6
Pp3c27_2720 Physcomitrium patens HOM05D003786 ORTHO05D004375 2.5e-35 152.9 247 36.4
ECA246G5003 Erigeron canadensis HOM05D003786 ORTHO05D004375 3.7e-34 149.1 103 67.0
VMungo0563G0001 Vigna mungo HOM05D003786 ORTHO05D004375 2.2e-31 139.8 185 42.7
Glyma.19G143800 Glycine max HOM05D003786 ORTHO05D004375 4.2e-30 135.6 102 63.7
Potri.014G083401 Populus trichocarpa HOM05D003786 ORTHO05D004375 3.6e-29 132.5 88 70.5
Migut.I00242 Erythranthe guttata HOM05D003786 ORTHO05D004375 8.8e-28 127.9 95 64.2
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.5e-27 126.3 189 42.3
CARHR150050 Cardamine hirsuta HOM05D003786 ORTHO05D004375 3.3e-27 125.9 145 49.7
Gohir.A13G220600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.1e-22 110.9 90 57.8
Peaxi162Scf00389g00065 Petunia axillaris HOM05D003786 ORTHO05D004375 4.2e-22 109.0 106 51.9
Lj1g0020830 Lotus japonicus HOM05D003786 ORTHO05D004375 7.2e-22 108.2 97 54.6
BcaC04g19667 Brassica carinata HOM05D000666 ORTHO05D001727 7.0e-17 91.7 89 51.7
Lsat_1_v5_gn_2_25281 Lactuca sativa HOM05D003786 ORTHO05D004375 1.5e-16 90.5 60 70.0
CBR_g44920 Chara braunii HOM05D003786 ORTHO05D004375 7.7e-16 88.2 133 39.1
TAR376G1065 Trochodendron aralioides HOM05D000267 ORTHO05D004375 2.2e-15 86.7 101 49.5
SGA_v2.0_scaffold146G36226 Striga asiatica HOM05D003786 ORTHO05D004375 2.5e-14 83.2 53 69.8
CARHR273910 Cardamine hirsuta HOM05D003786 ORTHO05D004375 4.2e-14 82.4 80 48.8
Cre02.g096900 Chlamydomonas reinhardtii HOM05D003786 ORTHO05D004375 3.9e-12 75.9 180 26.7
RcHm_v2.0_Chr5g0025331 Rosa chinensis HOM05D003786 ORTHO05D004375 4.4e-11 72.4 54 63.0
Medtr5g031400 Medicago truncatula HOM05D003786 ORTHO05D004375 3.1e-09 66.2 86 44.2
AT3G45577 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 5.3e-09 65.5 58 55.2
MCO01G070 Micromonas commoda HOM05D003786 ORTHO05D004375 1.2e-08 64.3 104 32.7
PRCOL_00003701 Prasinoderma coloniale HOM05D003786 ORTHO05D004375 3.8e-07 59.3 127 28.3


User provided reference genes

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