Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013853.1 Olea europaea HOM05D003978 ORTHO05D006033 1.8e-118 429.5 252 100.0
Migut.F01713 Erythranthe guttata HOM05D003978 ORTHO05D006033 2.4e-86 322.8 258 67.8
Cc02_g10770 Coffea canephora HOM05D003978 ORTHO05D006033 1.2e-85 320.5 255 67.1
MSTRG.9145 Avicennia marina HOM05D003978 ORTHO05D006033 4.2e-83 312.0 259 64.9
CSS0027147 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 8.2e-79 297.7 254 63.8
CSS0034790 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 8.2e-79 297.7 254 63.8
QL08p053633 Quercus lobata HOM05D003978 ORTHO05D006033 7.2e-75 284.6 255 62.4
CiPaw.02G171600 Carya illinoinensis HOM05D003978 ORTHO05D006033 6.7e-73 278.1 257 62.3
PGSC0003DMG400016922 Solanum tuberosum HOM05D003978 ORTHO05D006033 2.2e-71 273.1 254 61.8
GSVIVG01016195001 Vitis vinifera HOM05D003978 ORTHO05D006033 6.9e-70 268.1 255 59.2
Nitab4.5_0001450g0020 Nicotiana tabacum HOM05D003978 ORTHO05D006033 6.5e-68 261.5 259 61.4
Nitab4.5_0001359g0090 Nicotiana tabacum HOM05D003978 ORTHO05D006033 6.1e-66 255.0 253 58.5
Sopen03g019840 Solanum pennellii HOM05D003978 ORTHO05D006033 2.3e-65 253.1 254 58.7
Sabra10G0177400 Salix brachista HOM05D003978 ORTHO05D006033 6.7e-65 251.5 256 55.9
Ciclev10032520m.g Citrus clementina HOM05D003978 ORTHO05D006033 8.8e-65 251.1 257 57.6
MSTRG.8127 Avicennia marina HOM05D003978 ORTHO05D006033 1.5e-64 250.4 255 57.3
Solyc03g071560.4 Solanum lycopersicum HOM05D003978 ORTHO05D006033 2.0e-64 250.0 254 58.3
Nitab4.5_0001278g0040 Nicotiana tabacum HOM05D003978 ORTHO05D006033 5.7e-64 248.4 253 57.3
Nitab4.5_0002285g0020 Nicotiana tabacum HOM05D003978 ORTHO05D006033 1.3e-63 247.3 259 59.1
Nn6g35249 Nelumbo nucifera HOM05D003978 ORTHO05D006033 1.1e-62 244.2 258 57.4
TWI63G1197 Tripterygium wilfordii HOM05D003978 ORTHO05D006033 1.4e-62 243.8 265 56.2
Dinv41792 Davidia involucrata HOM05D003978 ORTHO05D006033 5.3e-62 241.9 237 58.2
Potri.010G228700 Populus trichocarpa HOM05D003978 ORTHO05D006033 9.1e-62 241.1 256 53.9
arahy.Tifrunner.gnm1.ann1.3AH3YU Arachis hypogaea HOM05D003978 ORTHO05D006033 1.2e-61 240.7 255 56.1
Oeu007407.1 Olea europaea HOM05D003978 ORTHO05D006033 2.0e-61 240.0 255 57.3
TPR.G26271 Trifolium pratense HOM05D003978 ORTHO05D006033 2.0e-61 240.0 255 55.3
TAR633G1384 Trochodendron aralioides HOM05D003978 ORTHO05D006033 2.6e-61 239.6 257 55.3
arahy.Tifrunner.gnm1.ann1.SNA779 Arachis hypogaea HOM05D003978 ORTHO05D006033 7.7e-61 238.0 255 55.7
DCAR_006405 Daucus carota HOM05D003978 ORTHO05D006033 1.7e-60 236.9 262 54.2
Sed0027411 Sechium edule HOM05D003978 ORTHO05D006033 2.2e-60 236.5 264 55.7
CsaV3_2G021100 Cucumis sativus L. HOM05D003978 ORTHO05D006033 1.1e-59 234.2 259 54.1
Manes.10G051200 Manihot esculenta HOM05D003978 ORTHO05D006033 1.1e-59 234.2 255 55.7
Cfa001800 Carpinus fangiana HOM05D003978 ORTHO05D006033 2.5e-59 233.0 261 55.2
Peaxi162Scf00145g00811 Petunia axillaris HOM05D003978 ORTHO05D006033 3.2e-59 232.6 264 54.2
Eucgr.J01044 Eucalyptus grandis HOM05D003978 ORTHO05D006033 5.5e-59 231.9 257 55.6
Sabra08G0021900 Salix brachista HOM05D003978 ORTHO05D006033 2.1e-58 229.9 258 55.0
MELO3C012401.2 Cucumis melo HOM05D003978 ORTHO05D006033 2.7e-58 229.6 262 58.0
CiPaw.01G267500 Carya illinoinensis HOM05D003978 ORTHO05D006033 4.7e-58 228.8 257 54.9
CsaV3_5G036020 Cucumis sativus L. HOM05D001446 ORTHO05D001360 1.4e-57 227.3 263 56.7
CSS0005536 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 3.9e-57 225.7 254 53.5
Glyma.10G276500 Glycine max HOM05D003978 ORTHO05D006033 1.5e-56 223.8 255 52.9
TAR623G0946 Trochodendron aralioides HOM05D003978 ORTHO05D006033 3.3e-56 222.6 256 51.6
TWI38G1352 Tripterygium wilfordii HOM05D003978 ORTHO05D006033 4.4e-56 222.2 262 53.4
Glyma.20G113200 Glycine max HOM05D003978 ORTHO05D006033 8.2e-55 218.0 255 51.8
PGSC0003DMG400031080 Solanum tuberosum HOM05D003978 ORTHO05D006033 1.1e-54 217.6 306 47.4
Lj5g0022774 Lotus japonicus HOM05D003978 ORTHO05D006033 2.4e-54 216.5 257 53.7
Atru.chr12.875 Acer truncatum HOM05D003978 ORTHO05D006033 2.6e-53 213.0 259 52.1
Sed0011758 Sechium edule HOM05D003978 ORTHO05D006033 1.0e-52 211.1 265 51.3
Sed0002426 Sechium edule HOM05D003978 ORTHO05D006033 1.3e-52 210.7 262 54.2
Ca_11194_v3 Cicer arietinum L. HOM05D003978 ORTHO05D006033 1.7e-52 210.3 255 53.3
PGR044G1831 Punica granatum HOM05D003978 ORTHO05D006033 1.5e-51 207.2 260 52.3
QL07p042820 Quercus lobata HOM05D003978 ORTHO05D006033 2.5e-51 206.5 254 51.2
Solyc11g008210.3 Solanum lycopersicum HOM05D003978 ORTHO05D006033 2.5e-51 206.5 293 47.4
Sopen11g003980 Solanum pennellii HOM05D003978 ORTHO05D006033 4.2e-51 205.7 298 46.6
TAR636G3645 Trochodendron aralioides HOM05D001807 ORTHO05D002044 1.6e-50 203.8 254 50.8
CANSAT64G1994 Cannabis sativa HOM05D003978 ORTHO05D006033 3.6e-50 202.6 253 51.8
MBI04_g13679_MAGBIO Magnolia biondii HOM05D003978 ORTHO05D006033 1.2e-48 197.6 270 50.0
Duzib106G0034 Durio zibethinus HOM05D001807 ORTHO05D002044 7.5e-48 194.9 256 50.8
CSS0048765 Camellia sinensis var. sinensis HOM05D003978 ORTHO05D006033 9.7e-48 194.5 262 51.5
Rhsim03G0089800 Rhododendron simsii HOM05D003978 ORTHO05D006033 9.7e-48 194.5 255 49.0
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 1.3e-47 194.1 260 50.0
Lalb_Chr19g0129381 Lupinus albus HOM05D003978 ORTHO05D006033 1.7e-47 193.7 255 49.4
Thecc.10G086400 Theobroma cacao HOM05D003978 ORTHO05D006033 3.7e-47 192.6 253 51.0
SGA_v2.0_scaffold51G18710 Striga asiatica HOM05D003978 ORTHO05D006033 1.4e-46 190.7 260 48.5
Potri.008G033000 Populus trichocarpa HOM05D003978 ORTHO05D006033 3.1e-46 189.5 255 47.8
ClCG05G021270 Citrullus lanatus HOM05D003978 ORTHO05D006033 7.0e-46 188.3 260 49.2
ECA238G2158 Erigeron canadensis HOM05D003978 ORTHO05D006033 9.1e-46 188.0 255 49.8
Aqoxy2G01695 Aquilegia oxysepala HOM05D003978 ORTHO05D006033 3.5e-45 186.0 256 46.9
Prupe.2G206800 Prunus persica HOM05D003978 ORTHO05D006033 3.5e-45 186.0 257 49.4
VMungo0720G1413 Vigna mungo HOM05D003978 ORTHO05D006033 5.0e-44 182.2 257 47.5
Cfa017638 Carpinus fangiana HOM05D003978 ORTHO05D006033 8.5e-44 181.4 255 47.1
Gohir.A10G201200 Gossypium hirsutum HOM05D003978 ORTHO05D006033 8.5e-44 181.4 255 50.2
Aqoxy2G02465 Aquilegia oxysepala HOM05D003978 ORTHO05D006033 1.5e-43 180.6 256 48.8
Gohir.D10G209000 Gossypium hirsutum HOM05D003978 ORTHO05D006033 3.2e-43 179.5 256 49.6
Gorai.011G235100 Gossypium raimondii HOM05D003978 ORTHO05D006033 3.2e-43 179.5 256 49.6
HanXRQChr14g0456531 Helianthus annuus HOM05D003978 ORTHO05D006033 3.2e-43 179.5 267 48.7
MD07G1168200 Malus domestica HOM05D003978 ORTHO05D006033 5.5e-43 178.7 260 47.7
Sed0020000 Sechium edule HOM05D003978 ORTHO05D006033 9.4e-43 177.9 261 48.3
vmacro07306 Vaccinium macrocarpon HOM05D003978 ORTHO05D006033 2.1e-42 176.8 258 46.1
Lsat_1_v5_gn_2_113200 Lactuca sativa HOM05D003978 ORTHO05D006033 6.1e-42 175.3 267 48.7
Haze_20513 Corylus avellana HOM05D003978 ORTHO05D006033 8.0e-42 174.9 254 45.7
Duzib114G0897 Durio zibethinus HOM05D003978 ORTHO05D006033 1.0e-41 174.5 256 49.2
Sc10g0008920 Simmondsia chinensis HOM05D003978 ORTHO05D006033 1.4e-41 174.1 259 47.5
MD01G1101500 Malus domestica HOM05D003978 ORTHO05D006033 2.3e-41 173.3 260 46.5
Psat6g229760 Pisum sativum HOM05D003978 ORTHO05D006033 3.0e-41 172.9 255 45.9
THA.LOC104816430 Tarenaya hassleriana HOM05D003978 ORTHO05D006033 8.8e-41 171.4 274 46.0
TWI15G0746 Tripterygium wilfordii HOM05D003978 ORTHO05D006033 2.0e-40 170.2 265 46.4
Phvul.007G025050 Phaseolus vulgaris HOM05D003978 ORTHO05D006033 5.7e-40 168.7 257 45.9
FAN03G0654 Fragaria x ananassa HOM05D003978 ORTHO05D006033 7.5e-40 168.3 267 46.1
Peaxi162Scf00253g00327 Petunia axillaris HOM05D003978 ORTHO05D006033 9.8e-40 167.9 249 43.0
THA.LOC104823202 Tarenaya hassleriana HOM05D003978 ORTHO05D006033 9.8e-40 167.9 269 46.1
Duzib128G0911 Durio zibethinus HOM05D003978 ORTHO05D006033 1.3e-39 167.5 256 48.0
CDE02G4598 Ceratophyllum demersum HOM05D003978 ORTHO05D006033 2.8e-39 166.4 280 44.3
COL.COLO4_36551 Corchorus olitorius HOM05D003978 ORTHO05D006033 1.4e-38 164.1 255 47.8
CsaV3_2G020900 Cucumis sativus L. HOM05D003978 ORTHO05D006033 2.7e-37 159.8 257 43.2
Actinidia03846 Actinidia chinensis HOM05D003978 ORTHO05D006033 1.3e-36 157.5 256 44.5
HPP92_017522 Vanilla planifolia HOM05D003978 ORTHO05D006033 1.7e-36 157.1 292 41.4
FAN01G2622 Fragaria x ananassa HOM05D003978 ORTHO05D006033 2.9e-36 156.4 261 44.1
PSO339G1141 Papaver somniferum HOM05D003978 ORTHO05D006033 3.8e-36 156.0 275 44.0
FvH4_7g18520 Fragaria vesca HOM05D003978 ORTHO05D006033 1.5e-35 154.1 261 43.3
FAN06G3745 Fragaria x ananassa HOM05D003978 ORTHO05D006033 1.5e-35 154.1 261 43.3
FAN10G1475 Fragaria x ananassa HOM05D003978 ORTHO05D006033 1.5e-35 154.1 261 43.3
Lj3A937G87 Lonicera japonica HOM05D003978 ORTHO05D006033 1.9e-35 153.7 299 39.8
EL10Ac7g16661 Beta vulgaris HOM05D003978 ORTHO05D006033 2.5e-35 153.3 247 45.3
THA.LOC104809978 Tarenaya hassleriana HOM05D003978 ORTHO05D006033 1.2e-34 151.0 268 43.7
vmacro07118 Vaccinium macrocarpon HOM05D003978 ORTHO05D006033 1.2e-34 151.0 257 43.2
FAN10G2862 Fragaria x ananassa HOM05D003978 ORTHO05D006033 2.8e-34 149.8 261 42.5
FAN06G5022 Fragaria x ananassa HOM05D003978 ORTHO05D006033 4.0e-33 146.0 262 42.0
PSO801G0725 Papaver somniferum HOM05D003978 ORTHO05D006033 5.2e-33 145.6 272 42.3
RcHm_v2.0_Chr1g0362301 Rosa chinensis HOM05D003978 ORTHO05D006033 6.8e-33 145.2 261 41.8
CANSAT80G2867 Cannabis sativa HOM05D003978 ORTHO05D006033 9.8e-32 141.4 264 42.0
Lalb_Chr03g0036261 Lupinus albus HOM05D003978 ORTHO05D006033 2.4e-30 136.7 265 40.0
Ah.08g211530 Amaranthus hybridus HOM05D003978 ORTHO05D006033 6.6e-28 128.6 250 43.2
A03p01600 Brassica napus HOM05D003978 ORTHO05D006033 1.5e-27 127.5 283 40.6
BraA03t09534Z Brassica rapa HOM05D003978 ORTHO05D006033 1.5e-27 127.5 283 40.6
AT5G04280 Arabidopsis thaliana HOM05D003978 ORTHO05D006033 2.5e-27 126.7 285 39.6
Zm00001eb053020 Zea mays HOM05D003978 ORTHO05D006033 4.3e-27 125.9 282 40.4
CARHR209000 Cardamine hirsuta HOM05D003978 ORTHO05D006033 1.2e-26 124.4 283 39.9
C03p01930 Brassica napus HOM05D003978 ORTHO05D006033 2.1e-26 123.6 285 39.6
BolC3t12747H Brassica oleracea HOM05D003978 ORTHO05D006033 2.1e-26 123.6 285 39.6
ATR0665G372 Amborella trichopoda HOM05D003978 ORTHO05D006033 2.8e-26 123.2 265 41.9
AL6G13910 Arabidopsis lyrata HOM05D003978 ORTHO05D006033 2.8e-26 123.2 282 39.0
SEGI_04637 Sequoiadendron giganteum HOM05D003978 ORTHO05D006033 4.7e-26 122.5 256 40.6
Zm00001eb116730 Zea mays HOM05D003978 ORTHO05D006033 8.0e-26 121.7 295 38.0
Cpa.g.sc53.147 Carica papaya HOM05D003978 ORTHO05D006033 3.1e-25 119.8 162 47.5
Zm00001eb217310 Zea mays HOM05D003978 ORTHO05D006033 6.8e-25 118.6 288 37.5
AUR62026923 Chenopodium quinoa HOM05D003978 ORTHO05D006033 8.9e-25 118.2 246 38.2
Sp6g38470 Schrenkiella parvula HOM05D003978 ORTHO05D006033 1.3e-23 114.4 288 38.5
CARHR052280 Cardamine hirsuta HOM05D003978 ORTHO05D006033 2.9e-23 113.2 262 37.4
C01p37200 Brassica napus HOM05D003978 ORTHO05D006033 4.9e-23 112.5 258 37.6
Carub.0006s0323 Capsella rubella HOM05D003978 ORTHO05D006033 8.3e-23 111.7 285 37.5
Aa31LG1G21070 Aethionema arabicum HOM05D003978 ORTHO05D006033 1.4e-22 110.9 285 37.5
Rhsim03G0088000 Rhododendron simsii HOM05D003978 ORTHO05D006033 1.9e-22 110.5 213 41.3
GSVIVG01033666001 Vitis vinifera HOM05D003978 ORTHO05D000124 1.6e-21 107.5 77 72.7
AL2G15940 Arabidopsis lyrata HOM05D003978 ORTHO05D006033 1.0e-20 104.8 280 33.9
Thhalv10023624m.g Eutrema salsugineum HOM05D003978 ORTHO05D006033 1.0e-20 104.8 272 35.7
AT1G60650 Arabidopsis thaliana HOM05D003978 ORTHO05D006033 1.3e-20 104.4 272 35.3
Oeu033869.1 Olea europaea HOM05D003978 ORTHO05D006033 2.5e-19 100.1 252 36.9
CDE02G3069 Ceratophyllum demersum HOM05D003978 ORTHO05D006033 7.3e-19 98.6 252 35.3
Zm00001eb302210 Zea mays HOM05D003978 ORTHO05D006033 7.3e-19 98.6 282 35.1
SEGI_12114 Sequoiadendron giganteum HOM05D003978 ORTHO05D006033 2.8e-18 96.7 260 38.8
CDE09G0059 Ceratophyllum demersum HOM05D000278 ORTHO05D004673 5.2e-17 92.4 154 42.2
Sp2g04070 Schrenkiella parvula HOM05D003978 ORTHO05D006033 6.8e-17 92.0 257 35.8
Atru.chr8.1764 Acer truncatum HOM05D003978 ORTHO05D006033 1.2e-16 91.3 91 58.2
AUR62042058 Chenopodium quinoa HOM05D003978 ORTHO05D006033 1.2e-16 91.3 172 44.8
Haze_16751 Corylus avellana HOM05D003978 ORTHO05D006033 1.3e-15 87.8 80 63.8
Os03g0681900 Oryza sativa ssp. japonica HOM05D003978 ORTHO05D006033 1.3e-15 87.8 289 32.5
Cfa001801 Carpinus fangiana HOM05D003978 ORTHO05D006033 2.2e-15 87.0 248 48.0
CDE05G3643 Ceratophyllum demersum HOM05D003978 ORTHO05D006033 8.3e-15 85.1 78 57.7
Carub.0002s0468 Capsella rubella HOM05D003978 ORTHO05D006033 3.2e-14 83.2 269 32.7
ClCG08G007820 Citrullus lanatus HOM05D003978 ORTHO05D006033 6.6e-12 75.5 81 55.6
DCAR_014420 Daucus carota HOM05D000142 ORTHO05D000124 4.7e-10 69.3 78 52.6
THA.LOC104821424 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 4.0e-09 66.2 74 50.0
RcHm_v2.0_Chr1g0378041 Rosa chinensis HOM05D000142 ORTHO05D000124 2.0e-08 63.9 75 50.7
Thhalv10004793m.g Eutrema salsugineum HOM05D000142 ORTHO05D000124 1.3e-07 61.2 80 43.8
Haze_10793 Corylus avellana HOM05D000142 ORTHO05D000124 2.9e-07 60.1 81 46.9
GSVIVG01001672001 Vitis vinifera HOM05D000142 ORTHO05D000124 3.7e-07 59.7 83 45.8
Nitab4.5_0000078g0240 Nicotiana tabacum HOM05D000142 ORTHO05D000124 4.9e-07 59.3 81 43.2
TPR.G19739 Trifolium pratense HOM05D000142 ORTHO05D000124 4.9e-07 59.3 75 45.3
RcHm_v2.0_Chr5g0012371 Rosa chinensis HOM05D010406 ORTHO05D020627 6.4e-07 58.9 39 71.8
CBR_g26188 Chara braunii HOM05D000142 ORTHO05D000124 8.3e-07 58.5 78 44.9
Gohir.D13G092200 Gossypium hirsutum HOM05D000142 ORTHO05D000124 8.3e-07 58.5 91 41.8
MBI19_g03289_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 1.1e-06 58.2 76 44.7
C07p35460 Brassica napus HOM05D000142 ORTHO05D000124 1.4e-06 57.8 78 44.9
HPP92_005746 Vanilla planifolia HOM05D000142 ORTHO05D000124 1.4e-06 57.8 75 46.7
Zm00001eb063770 Zea mays HOM05D000142 ORTHO05D000124 1.4e-06 57.8 86 44.2
Dinv25837 Davidia involucrata HOM05D000142 ORTHO05D000124 1.9e-06 57.4 76 46.1
Psat1g218600 Pisum sativum HOM05D000142 ORTHO05D000124 1.9e-06 57.4 76 46.1
Thecc.03G088100 Theobroma cacao HOM05D000142 ORTHO05D000124 1.9e-06 57.4 88 43.2
arahy.Tifrunner.gnm1.ann1.DM5MZC Arachis hypogaea HOM05D000142 ORTHO05D000124 3.2e-06 56.6 81 45.7
arahy.Tifrunner.gnm1.ann1.L2NQSV Arachis hypogaea HOM05D000142 ORTHO05D000124 3.2e-06 56.6 81 45.7
CDE07G1036 Ceratophyllum demersum HOM05D000142 ORTHO05D000124 3.2e-06 56.6 88 38.6
FAN21G3431 Fragaria x ananassa HOM05D010406 ORTHO05D020627 3.2e-06 56.6 70 45.7
FAN21G3583 Fragaria x ananassa HOM05D010406 ORTHO05D020627 3.2e-06 56.6 70 45.7
Gohir.A07G066300 Gossypium hirsutum HOM05D000142 ORTHO05D000124 4.1e-06 56.2 85 43.5
COL.COLO4_07595 Corchorus olitorius HOM05D000142 ORTHO05D000124 5.4e-06 55.8 92 41.3
Lalb_Chr07g0189381 Lupinus albus HOM05D000142 ORTHO05D000124 5.4e-06 55.8 179 33.5
Rhsim03G0115000 Rhododendron simsii HOM05D003978 ORTHO05D006033 7.1e-06 55.5 250 34.4
FAN25G0760 Fragaria x ananassa HOM05D010406 ORTHO05D020627 9.2e-06 55.1 71 43.7


User provided reference genes

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