Gene: Lalb_Chr03g0036261

General Information

Structural Information

  • Species Lupinus albus
  • Gene Identifier Lalb_Chr03g0036261
  • Transcript Identifier Lalb_Chr03g0036261
  • Gene Type Coding gene
  • Location Lalb_Chr03 : 7335884-7342209 : positive

Gene Family Information

  • ID HOM05D003978
  • #Genes/#Species 176/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lalb_Chr03g0036261.v1
  • pacid 44569898
  • uniprot A0A6A5PJT4

Descriptions

  • Description KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G04280
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G04280
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G04280
GO:0048026
ISO
PLAZA Integrative Orthologypositive regulation of mRNA splicing, via spliceosome AT5G04280
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G04280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0031490
ISO
PLAZA Integrative Orthologychromatin DNA binding AT5G04280
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G04280
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT5G04280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G04280
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G60650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001878 Zinc finger, CCHC-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR036875 Zinc finger, CCHC-type superfamily
Mapman id Description
16.7.2 RNA processing.RNA chaperone activities.RNA chaperone (RZ1)