Gene: AL2G15940

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL2G15940
  • Transcript Identifier AL2G15940.t1
  • Gene Type Coding gene
  • Location scaffold_2 : 3003637-3005720 : negative

Gene Family Information

  • ID HOM05D003978
  • #Genes/#Species 176/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL2G15940.v2.1
  • synonym 315285
  • synonym fgenesh1_pm.C_scaffold_2000318
  • pacid 35945398

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G60650
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G60650
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G60650
GO:0048026
ISO
PLAZA Integrative Orthologypositive regulation of mRNA splicing, via spliceosome AT1G60650
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G60650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G60650

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G60650
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G60650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR000504 RNA recognition motif domain
IPR001878 Zinc finger, CCHC-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR036875 Zinc finger, CCHC-type superfamily
Mapman id Description
16.7.2 RNA processing.RNA chaperone activities.RNA chaperone (RZ1)