Gene: Nitab4.5_0000078g0240

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000078g0240
  • Transcript Identifier Nitab4.5_0000078g0240.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000078 : 1103397-1104877 : positive

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000078g0240.1
  • SR1-identifier Nta18g10400.1

Descriptions

  • Description Zinc finger, CCHC-type, Nucleotide-binding, alpha-beta plait, RNA recognition motif domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G26420
GO:0009631
ISO
PLAZA Integrative Orthologycold acclimation AT3G26420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0000166
ISO
PLAZA Integrative Orthologynucleotide binding AT3G26420
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G26420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G26420
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G26420
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G26420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036875 Zinc finger, CCHC-type superfamily
IPR001878 Zinc finger, CCHC-type
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated