Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004219.1 Olea europaea HOM05D001185 ORTHO05D024808 1.7e-27 125.2 60 100.0
Migut.H02459 Erythranthe guttata HOM05D001185 ORTHO05D003777 2.2e-14 81.6 57 66.7
Oeu015842.1 Olea europaea HOM05D001185 ORTHO05D003777 2.9e-14 81.3 53 73.6
MSTRG.23296 Avicennia marina HOM05D001185 ORTHO05D003777 3.7e-14 80.9 57 68.4
Actinidia12222 Actinidia chinensis HOM05D001185 ORTHO05D003777 6.4e-14 80.1 53 73.6
MD02G1223100 Malus domestica HOM05D001185 ORTHO05D003777 6.4e-14 80.1 55 69.1
DCAR_001393 Daucus carota HOM05D001185 ORTHO05D003777 1.4e-13 79.0 57 66.7
Lj2A569G64 Lonicera japonica HOM05D001185 ORTHO05D003777 1.4e-13 79.0 53 73.6
FAN23G1006 Fragaria x ananassa HOM05D001185 ORTHO05D003777 1.9e-13 78.6 57 63.2
SalBow6G6156 Salvia bowleyana HOM05D001185 ORTHO05D003777 1.9e-13 78.6 57 63.2
MSTRG.2518 Avicennia marina HOM05D001185 ORTHO05D003777 2.4e-13 78.2 53 69.8
CSS0027334 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 2.4e-13 78.2 53 69.8
Eucgr.C01328 Eucalyptus grandis HOM05D001185 ORTHO05D014142 2.4e-13 78.2 57 68.4
Eucgr.C01514 Eucalyptus grandis HOM05D001185 ORTHO05D003777 2.4e-13 78.2 57 68.4
FvH4_5g27840 Fragaria vesca HOM05D001185 ORTHO05D003777 2.4e-13 78.2 57 64.9
FAN08G1862 Fragaria x ananassa HOM05D001185 ORTHO05D003777 2.4e-13 78.2 57 64.9
Actinidia28437 Actinidia chinensis HOM05D001185 ORTHO05D003777 3.2e-13 77.8 53 69.8
CSS0026681 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 3.2e-13 77.8 53 69.8
CAN.G452.9 Capsicum annuum HOM05D001185 ORTHO05D024808 3.2e-13 77.8 52 73.1
Migut.L00054 Erythranthe guttata HOM05D001185 ORTHO05D003777 4.1e-13 77.4 57 66.7
MSTRG.23295 Avicennia marina HOM05D001185 ORTHO05D003777 5.4e-13 77.0 57 66.7
CiPaw.04G088700 Carya illinoinensis HOM05D001185 ORTHO05D003777 5.4e-13 77.0 53 71.7
FvH4_1g23340 Fragaria vesca HOM05D001185 ORTHO05D003777 5.4e-13 77.0 53 67.9
PGR119G0924 Punica granatum HOM05D001185 ORTHO05D003777 5.4e-13 77.0 53 71.7
Haze_25086 Corylus avellana HOM05D001185 ORTHO05D003777 7.1e-13 76.6 53 69.8
FAN26G1501 Fragaria x ananassa HOM05D001185 ORTHO05D003777 7.1e-13 76.6 53 67.9
Actinidia09839 Actinidia chinensis HOM05D001185 ORTHO05D003777 9.2e-13 76.3 53 67.9
RcHm_v2.0_Chr2g0118191 Rosa chinensis HOM05D001185 ORTHO05D003777 9.2e-13 76.3 53 67.9
FAN04G1893 Fragaria x ananassa HOM05D001185 ORTHO05D003777 1.2e-12 75.9 57 63.2
FAN18G0103 Fragaria x ananassa HOM05D001185 ORTHO05D003777 1.2e-12 75.9 57 63.2
Nn5g28798 Nelumbo nucifera HOM05D001185 ORTHO05D003777 1.6e-12 75.5 53 69.8
FAN19G2345 Fragaria x ananassa HOM05D001185 ORTHO05D003777 2.1e-12 75.1 53 66.0
SalBow5G0567 Salvia bowleyana HOM05D001185 ORTHO05D003777 2.1e-12 75.1 57 64.9
PGSC0003DMG400019701 Solanum tuberosum HOM05D001185 ORTHO05D003777 2.1e-12 75.1 52 69.2
Dinv04462 Davidia involucrata HOM05D001185 ORTHO05D003777 2.7e-12 74.7 53 67.9
Lalb_Chr13g0296321 Lupinus albus HOM05D001185 ORTHO05D003777 3.5e-12 74.3 52 69.2
Prupe.2G117100 Prunus persica HOM05D001185 ORTHO05D003777 3.5e-12 74.3 53 66.0
MD07G1091700 Malus domestica HOM05D001185 ORTHO05D003777 4.6e-12 73.9 53 67.9
Nn1g06030 Nelumbo nucifera HOM05D001185 ORTHO05D003777 4.6e-12 73.9 53 66.0
RcHm_v2.0_Chr7g0219741 Rosa chinensis HOM05D001185 ORTHO05D003777 4.6e-12 73.9 53 64.2
Hund03402 Selenicereus undatus HOM05D001185 ORTHO05D003777 4.6e-12 73.9 51 70.6
Zm00001eb259300 Zea mays HOM05D001185 ORTHO05D003777 4.6e-12 73.9 57 63.2
CiPaw.03G131400 Carya illinoinensis HOM05D001185 ORTHO05D003777 6.0e-12 73.6 53 69.8
AUR62040966 Chenopodium quinoa HOM05D001185 ORTHO05D003777 6.0e-12 73.6 57 63.2
Sc01g0006190 Simmondsia chinensis HOM05D001185 ORTHO05D003777 6.0e-12 73.6 54 68.5
arahy.Tifrunner.gnm1.ann1.GJ501R Arachis hypogaea HOM05D001185 ORTHO05D003777 7.8e-12 73.2 52 67.3
arahy.Tifrunner.gnm1.ann1.ZE2GKX Arachis hypogaea HOM05D001185 ORTHO05D003777 7.8e-12 73.2 52 67.3
AUR62038363 Chenopodium quinoa HOM05D001185 ORTHO05D003777 7.8e-12 73.2 55 63.6
Lalb_Chr07g0184681 Lupinus albus HOM05D001185 ORTHO05D003777 7.8e-12 73.2 52 67.3
SGA_v2.0_scaffold2G01264 Striga asiatica HOM05D001185 ORTHO05D003777 7.8e-12 73.2 53 66.0
SGA_v2.0_scaffold51G18767 Striga asiatica HOM05D001185 ORTHO05D003777 7.8e-12 73.2 57 63.2
Ah.16g107210 Amaranthus hybridus HOM05D001185 ORTHO05D003777 1.0e-11 72.8 57 63.2
EL10Ac9g20711 Beta vulgaris HOM05D001185 ORTHO05D003777 1.0e-11 72.8 52 67.3
AUR62005056 Chenopodium quinoa HOM05D001185 ORTHO05D024808 1.0e-11 72.8 51 66.7
Glyma.05G186600 Glycine max HOM05D001185 ORTHO05D003777 1.0e-11 72.8 52 67.3
Glyma.08G145200 Glycine max HOM05D001185 ORTHO05D003777 1.0e-11 72.8 52 67.3
Dinv19452 Davidia involucrata HOM05D001185 ORTHO05D003777 1.3e-11 72.4 53 64.2
Nitab4.5_0001728g0070 Nicotiana tabacum HOM05D001185 ORTHO05D003777 1.3e-11 72.4 52 67.3
Solyc04g051370.4 Solanum lycopersicum HOM05D001185 ORTHO05D003777 1.3e-11 72.4 52 67.3
Sopen04g022780 Solanum pennellii HOM05D001185 ORTHO05D003777 1.3e-11 72.4 52 67.3
VMungo0251G0756 Vigna mungo HOM05D001185 ORTHO05D003777 1.3e-11 72.4 51 68.6
ClCG02G000890 Citrullus lanatus HOM05D001185 ORTHO05D003777 1.7e-11 72.0 51 68.6
TAR628G0368 Trochodendron aralioides HOM05D001185 ORTHO05D003777 1.7e-11 72.0 53 66.0
HanXRQChr03g0066271 Helianthus annuus HOM05D001185 ORTHO05D003777 2.3e-11 71.6 54 63.0
QL06p031307 Quercus lobata HOM05D001185 ORTHO05D003777 2.3e-11 71.6 53 64.2
Thecc.05G196500 Theobroma cacao HOM05D001185 ORTHO05D003777 2.3e-11 71.6 56 62.5
Zm00001eb210720 Zea mays HOM05D001185 ORTHO05D003777 2.3e-11 71.6 57 61.4
AUR62000951 Chenopodium quinoa HOM05D001185 ORTHO05D003777 3.0e-11 71.2 51 66.7
Peaxi162Scf00025g10312 Petunia axillaris HOM05D001185 ORTHO05D003777 3.0e-11 71.2 52 63.5
Rhsim10G0145000 Rhododendron simsii HOM05D001185 ORTHO05D003777 3.0e-11 71.2 52 65.4
vmacro12869 Vaccinium macrocarpon HOM05D001185 ORTHO05D003777 3.0e-11 71.2 53 62.3
Phvul.002G267700 Phaseolus vulgaris HOM05D001185 ORTHO05D003777 3.9e-11 70.9 51 66.7
MELO3C020972.2 Cucumis melo HOM05D001185 ORTHO05D003777 5.1e-11 70.5 51 66.7
CANSAT01G1300 Cannabis sativa HOM05D001185 ORTHO05D003777 6.6e-11 70.1 53 62.3
Lj4g0024278 Lotus japonicus HOM05D001185 ORTHO05D003777 6.6e-11 70.1 51 64.7
Sed0021912 Sechium edule HOM05D001185 ORTHO05D003777 6.6e-11 70.1 51 66.7
AUR62005017 Chenopodium quinoa HOM05D001185 ORTHO05D003777 8.6e-11 69.7 51 64.7
COL.COLO4_05183 Corchorus olitorius HOM05D001185 ORTHO05D003777 8.6e-11 69.7 56 60.7
Glyma.04G217500 Glycine max HOM05D001185 ORTHO05D003777 1.1e-10 69.3 54 61.1
Os03g0851300 Oryza sativa ssp. japonica HOM05D001185 ORTHO05D003777 1.1e-10 69.3 57 57.9
Peaxi162Scf00569g00535 Petunia axillaris HOM05D001185 ORTHO05D003777 1.1e-10 69.3 52 61.5
TAR376G1223 Trochodendron aralioides HOM05D001185 ORTHO05D003777 1.1e-10 69.3 53 64.2
arahy.Tifrunner.gnm1.ann1.6XFQ3U Arachis hypogaea HOM05D001185 ORTHO05D003777 1.5e-10 68.9 55 61.8
CAN.G787.28 Capsicum annuum HOM05D001185 ORTHO05D003777 1.5e-10 68.9 52 63.5
Atru.chr4.692 Acer truncatum HOM05D001185 ORTHO05D003777 1.9e-10 68.6 51 64.7
Ca_17672_v3 Cicer arietinum L. HOM05D001185 ORTHO05D003777 1.9e-10 68.6 54 59.3
Phvul.009G138000 Phaseolus vulgaris HOM05D001185 ORTHO05D003777 1.9e-10 68.6 55 58.2
Sed0017410 Sechium edule HOM05D001185 ORTHO05D003777 1.9e-10 68.6 51 64.7
ATR1089G042 Amborella trichopoda HOM05D001185 ORTHO05D003777 3.3e-10 67.8 51 62.7
CsaV3_2G017820 Cucumis sativus L. HOM05D001185 ORTHO05D003777 4.3e-10 67.4 51 62.7
Duzib106G0188 Durio zibethinus HOM05D001185 ORTHO05D003777 5.6e-10 67.0 54 59.3
ECA240G1489 Erigeron canadensis HOM05D001185 ORTHO05D003777 5.6e-10 67.0 57 56.1
HanXRQChr10g0284121 Helianthus annuus HOM05D001185 ORTHO05D003777 5.6e-10 67.0 57 61.4
TAR625G1099 Trochodendron aralioides HOM05D001185 ORTHO05D003777 5.6e-10 67.0 53 62.3
arahy.Tifrunner.gnm1.ann1.R73VTB Arachis hypogaea HOM05D001185 ORTHO05D003777 7.3e-10 66.6 55 60.0
Gohir.A05G392400 Gossypium hirsutum HOM05D001185 ORTHO05D003777 7.3e-10 66.6 51 62.7
Gorai.012G027200 Gossypium raimondii HOM05D001185 ORTHO05D003777 7.3e-10 66.6 51 62.7
Sopen04g006160 Solanum pennellii HOM05D001185 ORTHO05D003777 7.3e-10 66.6 51 60.8
TPR.G30457 Trifolium pratense HOM05D001185 ORTHO05D003777 7.3e-10 66.6 51 60.8
Ciclev10025611m.g Citrus clementina HOM05D001185 ORTHO05D003777 9.5e-10 66.2 51 58.8
Duzib128G1392 Durio zibethinus HOM05D001185 ORTHO05D003777 9.5e-10 66.2 56 57.1
PGSC0003DMG401023644 Solanum tuberosum HOM05D001185 ORTHO05D003777 9.5e-10 66.2 51 60.8
HPP92_024316 Vanilla planifolia HOM05D001185 ORTHO05D003777 9.5e-10 66.2 50 60.0
Cpa.g.sc72.48 Carica papaya HOM05D001185 ORTHO05D003777 1.2e-09 65.9 54 57.4
HanXRQChr05g0138241 Helianthus annuus HOM05D001185 ORTHO05D003777 1.2e-09 65.9 52 59.6
Lsat_1_v5_gn_7_53021 Lactuca sativa HOM05D001185 ORTHO05D003777 1.2e-09 65.9 53 56.6
Ca_15772_v3 Cicer arietinum L. HOM05D001185 ORTHO05D003777 1.6e-09 65.5 51 58.8
Ca_30456_v3 Cicer arietinum L. HOM05D001185 ORTHO05D003777 1.6e-09 65.5 51 58.8
Gohir.D04G024700 Gossypium hirsutum HOM05D001185 ORTHO05D003777 1.6e-09 65.5 51 62.7
Medtr8g092450 Medicago truncatula HOM05D001185 ORTHO05D003777 1.6e-09 65.5 51 58.8
Psat7g049320 Pisum sativum HOM05D001185 ORTHO05D003777 1.6e-09 65.5 51 58.8
Potri.005G087100 Populus trichocarpa HOM05D001185 ORTHO05D003777 1.6e-09 65.5 51 62.7
HPP92_006177 Vanilla planifolia HOM05D001185 ORTHO05D003777 1.6e-09 65.5 51 58.8
Duzib177G1116 Durio zibethinus HOM05D001185 ORTHO05D003777 2.1e-09 65.1 56 55.4
Glyma.06G148300 Glycine max HOM05D001185 ORTHO05D003777 2.1e-09 65.1 52 59.6
Manes.12G145900 Manihot esculenta HOM05D001185 ORTHO05D003777 2.1e-09 65.1 51 62.7
Manes.13G081000 Manihot esculenta HOM05D001185 ORTHO05D003777 2.1e-09 65.1 51 60.8
Solyc04g012040.3 Solanum lycopersicum HOM05D001185 ORTHO05D003777 2.1e-09 65.1 51 58.8
unitig_736.g22631 Utricularia gibba HOM05D001185 ORTHO05D003777 2.1e-09 65.1 57 54.4
Potri.007G076900 Populus trichocarpa HOM05D001185 ORTHO05D003777 2.8e-09 64.7 51 60.8
Sabra05G0071900 Salix brachista HOM05D001185 ORTHO05D003777 2.8e-09 64.7 51 62.7
TWI79G1157 Tripterygium wilfordii HOM05D001185 ORTHO05D003777 3.6e-09 64.3 50 62.0
AUR62038358 Chenopodium quinoa HOM05D001185 ORTHO05D000043 4.7e-09 63.9 46 67.4
Gohir.D08G246000 Gossypium hirsutum HOM05D001185 ORTHO05D003777 4.7e-09 63.9 56 55.4
Gorai.004G262500 Gossypium raimondii HOM05D001185 ORTHO05D003777 4.7e-09 63.9 56 55.4
PSO170G5175 Papaver somniferum HOM05D001185 ORTHO05D003777 4.7e-09 63.9 53 52.8
PSO700G0370 Papaver somniferum HOM05D001185 ORTHO05D003777 4.7e-09 63.9 53 52.8
Gohir.A08G225600 Gossypium hirsutum HOM05D001185 ORTHO05D003777 6.2e-09 63.5 56 55.4
TPR.G2195 Trifolium pratense HOM05D001185 ORTHO05D003777 6.2e-09 63.5 51 56.9
TWI31G0616 Tripterygium wilfordii HOM05D001185 ORTHO05D003777 6.2e-09 63.5 52 57.7
MBI18_g36189_MAGBIO Magnolia biondii HOM05D001185 ORTHO05D003777 8.1e-09 63.2 52 55.8
MBI18_g36191_MAGBIO Magnolia biondii HOM05D001185 ORTHO05D003777 8.1e-09 63.2 52 55.8
Medtr8g092390 Medicago truncatula HOM05D001185 ORTHO05D003777 8.1e-09 63.2 51 56.9
GSVIVG01030351001 Vitis vinifera HOM05D001185 ORTHO05D024808 8.1e-09 63.2 53 56.6
VMungo1309G1478 Vigna mungo HOM05D001185 ORTHO05D003777 1.1e-08 62.8 51 56.9
CDE06G2150 Ceratophyllum demersum HOM05D001185 ORTHO05D003777 1.8e-08 62.0 52 55.8
Sabra07G0064800 Salix brachista HOM05D001185 ORTHO05D003777 1.8e-08 62.0 51 60.8
Aqoxy6G00403 Aquilegia oxysepala HOM05D001185 ORTHO05D003777 2.3e-08 61.6 51 56.9
Pp3c10_9730 Physcomitrium patens HOM05D001185 ORTHO05D003777 2.3e-08 61.6 52 53.8
AT5G09900 Arabidopsis thaliana HOM05D001185 ORTHO05D003777 3.1e-08 61.2 54 55.6
CDE02G4573 Ceratophyllum demersum HOM05D001185 ORTHO05D003777 3.1e-08 61.2 52 53.8
BcaC03g13283 Brassica carinata HOM05D001185 ORTHO05D003777 4.0e-08 60.8 54 53.7
A10p27570 Brassica napus HOM05D001185 ORTHO05D003777 4.0e-08 60.8 54 53.7
C02p04140 Brassica napus HOM05D001185 ORTHO05D003777 4.0e-08 60.8 54 53.7
C09p67640 Brassica napus HOM05D001185 ORTHO05D003777 4.0e-08 60.8 54 53.7
BolC2t06376H Brassica oleracea HOM05D001185 ORTHO05D003777 4.0e-08 60.8 54 53.7
BraA10t44809Z Brassica rapa HOM05D001185 ORTHO05D003777 4.0e-08 60.8 54 53.7
A03p04320 Brassica napus HOM05D001185 ORTHO05D003777 5.2e-08 60.5 54 51.9
C03p04770 Brassica napus HOM05D001185 ORTHO05D003777 5.2e-08 60.5 54 51.9
THA.LOC104799360 Tarenaya hassleriana HOM05D001185 ORTHO05D003777 5.2e-08 60.5 51 56.9
THA.LOC104807989 Tarenaya hassleriana HOM05D001185 ORTHO05D003777 5.2e-08 60.5 49 59.2
THA.LOC104818471 Tarenaya hassleriana HOM05D001185 ORTHO05D003777 5.2e-08 60.5 49 59.2
THA.LOC104818472 Tarenaya hassleriana HOM05D001185 ORTHO05D003777 5.2e-08 60.5 49 59.2
BcaB05g21522 Brassica carinata HOM05D001185 ORTHO05D003777 6.8e-08 60.1 54 53.7
BolC3t13011H Brassica oleracea HOM05D001185 ORTHO05D003777 6.8e-08 60.1 54 51.9
BolC9t59526H Brassica oleracea HOM05D001185 ORTHO05D003777 6.8e-08 60.1 54 53.7
Thhalv10013557m.g Eutrema salsugineum HOM05D001185 ORTHO05D003777 6.8e-08 60.1 54 53.7
A02p00220 Brassica napus HOM05D001185 ORTHO05D003777 8.9e-08 59.7 54 51.9
BraA02t05006Z Brassica rapa HOM05D001185 ORTHO05D003777 8.9e-08 59.7 54 51.9
CARHR203440 Cardamine hirsuta HOM05D001185 ORTHO05D003777 8.9e-08 59.7 54 51.9
Thhalv10004227m.g Eutrema salsugineum HOM05D001185 ORTHO05D003777 8.9e-08 59.7 51 54.9
Sp6g33510 Schrenkiella parvula HOM05D001185 ORTHO05D003777 8.9e-08 59.7 54 51.9
AL6G20320 Arabidopsis lyrata HOM05D001185 ORTHO05D003777 1.2e-07 59.3 54 51.9
Sp2g27830 Schrenkiella parvula HOM05D001185 ORTHO05D003777 1.2e-07 59.3 51 56.9
Lsat_1_v5_gn_4_17980 Lactuca sativa HOM05D001185 ORTHO05D024808 1.5e-07 58.9 54 50.0
Pp3c1_21660 Physcomitrium patens HOM05D001185 ORTHO05D003777 1.5e-07 58.9 50 54.0
HPP92_024282 Vanilla planifolia HOM05D001185 ORTHO05D003777 2.0e-07 58.5 50 56.0
BcaB01g05557 Brassica carinata HOM05D001185 ORTHO05D003777 2.6e-07 58.2 54 50.0
BcaB08g37173 Brassica carinata HOM05D001185 ORTHO05D003777 2.6e-07 58.2 54 51.9
CARHR278750 Cardamine hirsuta HOM05D001185 ORTHO05D003777 3.4e-07 57.8 51 54.9
AL8G42220 Arabidopsis lyrata HOM05D001185 ORTHO05D003777 5.8e-07 57.0 49 55.1
AT5G64760 Arabidopsis thaliana HOM05D001185 ORTHO05D003777 5.8e-07 57.0 49 55.1
Mapoly0173s0007 Marchantia polymorpha HOM05D001185 ORTHO05D003777 5.8e-07 57.0 52 48.1
Nitab4.5_0010260g0020 Nicotiana tabacum HOM05D001185 ORTHO05D003777 5.8e-07 57.0 40 70.0
PSO339G0818 Papaver somniferum HOM05D001185 ORTHO05D003777 5.8e-07 57.0 52 48.1
Carub.0008s2557 Capsella rubella HOM05D001185 ORTHO05D003777 1.7e-06 55.5 49 53.1
Lj4A859T54 Lonicera japonica HOM05D001185 ORTHO05D003777 2.9e-06 54.7 32 78.1
SMO358G0708 Selaginella moellendorffii HOM05D001185 ORTHO05D003777 6.4e-06 53.5 52 48.1
Cc07_g16710 Coffea canephora HOM05D001185 ORTHO05D003777 8.4e-06 53.1 32 75.0


User provided reference genes

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