Gene: TPR.G30457
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G30457
- Transcript Identifier TPR.T31489
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_747 : 75810-79625 : negative
Gene Family Information
- ID HOM05D001185
- #Genes/#Species 526/100
- Phylogenetic origin
- ID ORTHO05D003777
- #Genes/#Species 205/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA31489.v2
- id Tp57577_TGAC_v2_gene30457.v2
- pacid 35982969
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007275 | ISO | PLAZA Integrative Orthology | multicellular organism development | AT5G09900 |
| GO:0030163 | ISO | PLAZA Integrative Orthology | protein catabolic process | AT5G64760 |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT5G09900 |
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D001185 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D001185 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G09900 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G09900 |
| GO:0000502 | ISO | PLAZA Integrative Orthology | proteasome complex | AT5G09900 |
| GO:0005840 | ISO | PLAZA Homology (enrichment) | ribosome | HOM05D001185 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040134 | 26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4 |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR000717 | Proteasome component (PCI) domain |
| IPR040896 | 26S proteasome regulatory subunit RPN5, C-terminal domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 19.2.5.2.2.4 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN5 |