Gene: ATR1089G042

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR1089G042
  • Transcript Identifier ATR1089G042.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00099 : 64832-79764 : negative

Gene Family Information

  • ID HOM05D001185
  • #Genes/#Species 526/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00099.5.v1.0
  • pacid 31570328

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development AT5G09900
GO:0030163
ISO
PLAZA Integrative Orthologyprotein catabolic process AT5G64760
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G09900
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D001185

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D001185

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G09900
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G09900
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT5G09900
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D001185

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040134 26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4
IPR000717 Proteasome component (PCI) domain
IPR040896 26S proteasome regulatory subunit RPN5, C-terminal domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
19.2.5.2.2.4 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN5