Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001556.2 Olea europaea HOM05D005037 ORTHO05D006274 1.5e-203 712.6 359 100.0
Oeu002392.1 Olea europaea HOM05D005037 ORTHO05D006274 1.3e-146 523.5 351 78.3
MSTRG.1382 Avicennia marina HOM05D005037 ORTHO05D006274 2.4e-132 476.1 351 71.2
Cc10_g13130 Coffea canephora HOM05D005037 ORTHO05D006274 1.4e-127 460.3 351 68.9
Ciclev10001639m.g Citrus clementina HOM05D005037 ORTHO05D006274 4.8e-125 451.8 351 66.4
SalBow7G3864 Salvia bowleyana HOM05D005037 ORTHO05D006274 2.4e-124 449.5 351 67.0
TAR381G0890 Trochodendron aralioides HOM05D005037 ORTHO05D006274 3.1e-124 449.1 351 65.2
Nitab4.5_0000174g0240 Nicotiana tabacum HOM05D005037 ORTHO05D006274 4.1e-124 448.7 366 64.8
CSS0001186 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.2e-123 447.2 349 67.9
TWI32G0322 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 2.6e-123 446.0 352 65.6
Migut.C01102 Erythranthe guttata HOM05D005037 ORTHO05D006274 3.5e-123 445.7 355 67.0
Actinidia16585 Actinidia chinensis HOM05D005037 ORTHO05D006274 1.0e-122 444.1 351 67.2
Nitab4.5_0002972g0050 Nicotiana tabacum HOM05D005037 ORTHO05D006274 1.3e-122 443.7 366 64.5
Peaxi162Scf00066g01930 Petunia axillaris HOM05D005037 ORTHO05D006274 1.7e-122 443.4 366 64.2
PGSC0003DMG400024852 Solanum tuberosum HOM05D005037 ORTHO05D006274 1.9e-121 439.9 366 63.4
TWI60G0144 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 2.1e-120 436.4 357 63.9
Atru.chr13.1666 Acer truncatum HOM05D005037 ORTHO05D006274 1.0e-119 434.1 351 65.0
CAN.G657.3 Capsicum annuum HOM05D005037 ORTHO05D006274 1.0e-119 434.1 366 63.1
Duzib041G0013 Durio zibethinus HOM05D005037 ORTHO05D006274 1.0e-119 434.1 361 63.2
Nn5g28553 Nelumbo nucifera HOM05D005037 ORTHO05D006274 1.0e-119 434.1 351 65.2
Sc02g0004500 Simmondsia chinensis HOM05D005037 ORTHO05D006274 1.8e-119 433.3 352 66.2
GSVIVG01010010001 Vitis vinifera HOM05D005037 ORTHO05D006274 4.0e-119 432.2 352 66.5
Cpa.g.sc13.102 Carica papaya HOM05D005037 ORTHO05D006274 8.8e-119 431.0 367 62.7
SGA_v2.0_scaffold25G11149 Striga asiatica HOM05D005037 ORTHO05D006274 1.2e-118 430.6 376 64.1
Gohir.D02G074100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 2.6e-118 429.5 363 63.9
Eucgr.G02653 Eucalyptus grandis HOM05D005037 ORTHO05D006274 3.3e-118 429.1 352 64.8
Hund17388 Selenicereus undatus HOM05D005037 ORTHO05D006274 4.4e-118 428.7 353 64.9
Potri.002G073200 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.3e-117 427.2 351 65.5
Thecc.08G141200 Theobroma cacao HOM05D005037 ORTHO05D006274 2.2e-117 426.4 362 62.4
Rhsim03G0093500 Rhododendron simsii HOM05D005037 ORTHO05D006274 2.8e-117 426.0 354 65.5
Gohir.A02G068100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 6.3e-117 424.9 363 63.4
Gorai.005G083500 Gossypium raimondii HOM05D005037 ORTHO05D006274 8.3e-117 424.5 364 63.7
Sopen04g026520 Solanum pennellii HOM05D005037 ORTHO05D006274 8.3e-117 424.5 366 61.2
Solyc04g064570.3 Solanum lycopersicum HOM05D005037 ORTHO05D006274 2.4e-116 422.9 366 60.9
DCAR_015244 Daucus carota HOM05D005037 ORTHO05D006274 3.1e-116 422.5 360 62.8
DCAR_019815 Daucus carota HOM05D005037 ORTHO05D006274 7.0e-116 421.4 360 63.1
Duzib116G0940 Durio zibethinus HOM05D005037 ORTHO05D006274 7.0e-116 421.4 363 62.5
Sp1g33080 Schrenkiella parvula HOM05D005037 ORTHO05D006274 9.1e-116 421.0 357 61.1
vmacro08710 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 1.6e-115 420.2 354 64.1
Manes.02G173400 Manihot esculenta HOM05D005037 ORTHO05D006274 2.0e-115 419.9 351 63.0
Sabra05G0142600 Salix brachista HOM05D005037 ORTHO05D006274 2.7e-115 419.5 352 63.9
Aqoxy6G00356 Aquilegia oxysepala HOM05D005037 ORTHO05D006274 7.7e-115 417.9 351 63.5
EL10Ac4g08872 Beta vulgaris HOM05D005037 ORTHO05D006274 1.3e-114 417.2 358 60.9
PGR142G4097 Punica granatum HOM05D005037 ORTHO05D006274 1.7e-114 416.8 352 62.2
EL10Ac1g01450 Beta vulgaris HOM05D005037 ORTHO05D006274 3.8e-114 415.6 358 60.6
CiPaw.16G018700 Carya illinoinensis HOM05D005037 ORTHO05D006274 3.8e-114 415.6 352 62.2
BcaB07g33972 Brassica carinata HOM05D005037 ORTHO05D006274 8.5e-114 414.5 357 61.6
Thhalv10011594m.g Eutrema salsugineum HOM05D005037 ORTHO05D006274 8.5e-114 414.5 359 60.7
A05p21790 Brassica napus HOM05D005037 ORTHO05D006274 2.5e-113 412.9 359 60.2
BraA05t21100Z Brassica rapa HOM05D005037 ORTHO05D006274 2.5e-113 412.9 359 60.2
BcaB02g11416 Brassica carinata HOM05D005037 ORTHO05D006274 4.2e-113 412.1 360 60.0
BolC5t32377H Brassica oleracea HOM05D005037 ORTHO05D006274 4.2e-113 412.1 359 60.2
A10p07730 Brassica napus HOM05D005037 ORTHO05D006274 5.5e-113 411.8 357 59.9
BraSC36t46032Z Brassica rapa HOM05D005037 ORTHO05D006274 5.5e-113 411.8 357 59.9
Ah.10g032080 Amaranthus hybridus HOM05D005037 ORTHO05D006274 7.2e-113 411.4 353 61.8
BcaC05g27657 Brassica carinata HOM05D005037 ORTHO05D006274 7.2e-113 411.4 359 59.9
THA.LOC104798858 Tarenaya hassleriana HOM05D005037 ORTHO05D006274 9.4e-113 411.0 370 59.2
Potri.005G186700 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.6e-112 410.2 352 61.9
AL1G51980 Arabidopsis lyrata HOM05D005037 ORTHO05D006274 2.7e-112 409.5 364 59.3
C05p36450 Brassica napus HOM05D005037 ORTHO05D006274 3.6e-112 409.1 359 59.6
Carub.0001s3480 Capsella rubella HOM05D005037 ORTHO05D006274 3.6e-112 409.1 365 58.6
AT1G43860 Arabidopsis thaliana HOM05D005037 ORTHO05D006274 4.7e-112 408.7 364 58.8
MD05G1011400 Malus domestica HOM05D005037 ORTHO05D006274 1.0e-111 407.5 372 59.4
CARHR035400 Cardamine hirsuta HOM05D005037 ORTHO05D006274 1.4e-111 407.1 365 58.9
Lsat_1_v5_gn_1_9740 Lactuca sativa HOM05D005037 ORTHO05D006274 1.4e-111 407.1 361 61.5
CANSAT54G1160 Cannabis sativa HOM05D005037 ORTHO05D006274 1.8e-111 406.8 357 61.1
ATR1136G011 Amborella trichopoda HOM05D005037 ORTHO05D006274 4.0e-111 405.6 354 60.7
AUR62027497 Chenopodium quinoa HOM05D005037 ORTHO05D006274 6.8e-111 404.8 353 61.8
PSO673G0037 Papaver somniferum HOM05D005037 ORTHO05D006274 1.2e-110 404.1 365 58.9
Haze_17689 Corylus avellana HOM05D005037 ORTHO05D006274 2.6e-110 402.9 355 61.7
AUR62033983 Chenopodium quinoa HOM05D005037 ORTHO05D006274 2.8e-109 399.4 353 60.6
Aa31LG6G9500 Aethionema arabicum HOM05D005037 ORTHO05D006274 8.3e-109 397.9 365 58.6
CDE02G2089 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 1.8e-108 396.7 356 59.6
PSO421G0325 Papaver somniferum HOM05D005037 ORTHO05D006274 5.4e-108 395.2 364 56.9
Prupe.8G016400 Prunus persica HOM05D005037 ORTHO05D006274 7.0e-108 394.8 372 56.7
ECA233G3664 Erigeron canadensis HOM05D005037 ORTHO05D006274 9.1e-108 394.4 338 60.9
RcHm_v2.0_Chr6g0277561 Rosa chinensis HOM05D005037 ORTHO05D006274 1.2e-107 394.0 365 57.5
PSO541G3185 Papaver somniferum HOM05D005037 ORTHO05D006274 2.7e-107 392.9 376 58.8
PSO675G6067 Papaver somniferum HOM05D005037 ORTHO05D006274 2.7e-107 392.9 376 58.8
HPP92_020501 Vanilla planifolia HOM05D005037 ORTHO05D006274 2.7e-107 392.9 351 59.8
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 3.5e-107 392.5 356 58.7
PSO673G0007 Papaver somniferum HOM05D005037 ORTHO05D006274 7.7e-107 391.3 365 57.3
HanXRQChr04g0109491 Helianthus annuus HOM05D005037 ORTHO05D006274 2.3e-106 389.8 351 60.4
FvH4_2g15010 Fragaria vesca HOM05D005037 ORTHO05D006274 1.5e-105 387.1 373 56.0
FAN24G2486 Fragaria x ananassa HOM05D005037 ORTHO05D006274 4.2e-105 385.6 375 55.7
CSS0023189 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 7.2e-105 384.8 349 61.0
Lalb_Chr21g0311851 Lupinus albus HOM05D005037 ORTHO05D006274 4.7e-104 382.1 353 58.1
QL09p029039 Quercus lobata HOM05D005037 ORTHO05D006274 4.7e-104 382.1 354 58.5
arahy.Tifrunner.gnm1.ann1.HCD3KF Arachis hypogaea HOM05D005037 ORTHO05D006274 1.8e-103 380.2 355 58.0
VMungo0540G1405 Vigna mungo HOM05D005037 ORTHO05D006274 2.3e-103 379.8 352 56.2
arahy.Tifrunner.gnm1.ann1.E7XDIB Arachis hypogaea HOM05D005037 ORTHO05D006274 6.8e-103 378.3 355 57.7
Lalb_Chr02g0149921 Lupinus albus HOM05D005037 ORTHO05D006274 8.9e-103 377.9 354 57.3
Sed0001170 Sechium edule HOM05D005037 ORTHO05D006274 3.4e-102 375.9 354 56.8
arahy.Tifrunner.gnm1.ann1.RY8QGI Arachis hypogaea HOM05D005037 ORTHO05D006274 4.4e-102 375.6 354 57.3
FAN27G1276 Fragaria x ananassa HOM05D005037 ORTHO05D006274 9.8e-102 374.4 375 54.4
Glyma.14G119400 Glycine max HOM05D005037 ORTHO05D006274 3.7e-101 372.5 352 56.2
Phvul.006G102500 Phaseolus vulgaris HOM05D005037 ORTHO05D006274 1.8e-100 370.2 352 55.7
ECA234G0804 Erigeron canadensis HOM05D005037 ORTHO05D006274 4.1e-100 369.0 351 56.1
Ca_30116_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 3.5e-99 365.9 353 55.8
ClCG08G002740 Citrullus lanatus HOM05D005037 ORTHO05D006274 5.0e-98 362.1 354 54.8
Lj1g0018953 Lotus japonicus HOM05D005037 ORTHO05D006274 8.6e-98 361.3 353 55.2
MELO3C010584.2 Cucumis melo HOM05D005037 ORTHO05D006274 1.1e-97 360.9 354 55.1
CsaV3_6G035600 Cucumis sativus L. HOM05D005037 ORTHO05D006274 3.3e-97 359.4 354 54.0
Lj4g0018852 Lotus japonicus HOM05D005037 ORTHO05D006274 3.3e-97 359.4 353 55.0
Glyma.11G142700 Glycine max HOM05D005037 ORTHO05D006274 4.7e-96 355.5 352 54.3
TPR.G31447 Trifolium pratense HOM05D005037 ORTHO05D006274 1.4e-95 354.0 353 54.7
Lj4A690T47 Lonicera japonica HOM05D005037 ORTHO05D006274 5.2e-95 352.1 299 62.9
Medtr6g085170 Medicago truncatula HOM05D005037 ORTHO05D006274 5.2e-95 352.1 353 54.7
SEGI_36163 Sequoiadendron giganteum HOM05D005037 ORTHO05D006274 4.4e-94 349.0 373 51.5
vmacro21120 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 1.7e-93 347.1 307 59.3
Psat1g039480 Pisum sativum HOM05D005037 ORTHO05D006274 3.7e-93 345.9 353 52.7
SHI09275 Sapria himalayana HOM05D005037 ORTHO05D006274 3.2e-92 342.8 354 55.1
Dinv41137 Davidia involucrata HOM05D005037 ORTHO05D006274 1.5e-89 334.0 338 56.8
Zm00001eb260230 Zea mays HOM05D005037 ORTHO05D006274 7.3e-89 331.6 351 51.0
Os08g0107500 Oryza sativa ssp. japonica HOM05D005037 ORTHO05D006274 1.6e-88 330.5 356 50.0
unitig_747.g21501 Utricularia gibba HOM05D005037 ORTHO05D006274 4.7e-88 328.9 293 63.1
Ca_25512_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 1.1e-87 327.8 340 52.6
Cfa018383 Carpinus fangiana HOM05D005037 ORTHO05D006274 3.4e-86 322.8 312 57.4
Pp3c4_180 Physcomitrium patens HOM05D005037 ORTHO05D006274 2.1e-83 313.5 381 45.4
HPP92_020498 Vanilla planifolia HOM05D005037 ORTHO05D006274 1.0e-82 311.2 305 56.7
SMO348G0060 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 5.1e-82 308.9 356 48.0
AagrBONN_evm.TU.Sc2ySwM_117.3544 Anthoceros agrestis HOM05D005037 ORTHO05D006274 6.6e-74 282.0 349 44.7
COL.COLO4_33811 Corchorus olitorius HOM05D005037 ORTHO05D006274 4.7e-72 275.8 363 46.3
FAN20G2613 Fragaria x ananassa HOM05D005037 ORTHO05D006274 2.4e-60 236.9 150 81.3
SMO272G0010 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 4.2e-52 209.5 127 80.3
PSO017G3306 Papaver somniferum HOM05D005037 ORTHO05D006274 2.1e-51 207.2 366 40.2
CSS0016864 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.5e-49 200.3 131 79.4
MD05G1011500 Malus domestica HOM05D005037 ORTHO05D006274 8.1e-48 195.3 272 44.1
FAN15G0656 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.8e-47 194.1 111 87.4
PSO729G0215 Papaver somniferum HOM05D005037 ORTHO05D006274 6.9e-47 192.2 253 47.4
CSS0012113 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 5.8e-46 189.1 151 66.9
CBR_g48721 Chara braunii HOM05D005037 ORTHO05D006274 6.5e-45 185.7 367 33.0
PRCOL_00006527 Prasinoderma coloniale HOM05D005037 ORTHO05D006274 9.3e-44 181.8 354 35.6
CSS0029081 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.6e-43 181.0 157 63.1
Cre01.g017500 Chlamydomonas reinhardtii HOM05D005037 ORTHO05D006274 9.0e-39 165.2 143 56.6
C06p00420 Brassica napus HOM05D005037 ORTHO05D006274 5.0e-37 159.5 133 66.2
C06p00390 Brassica napus HOM05D005037 ORTHO05D006274 1.1e-36 158.3 133 65.4
Aa31LG6G9600 Aethionema arabicum HOM05D005037 ORTHO05D006274 2.5e-36 157.1 157 51.6
Mapoly0003s0227 Marchantia polymorpha HOM05D005037 ORTHO05D006274 2.5e-36 157.1 266 36.1
MCO07G375 Micromonas commoda HOM05D005037 ORTHO05D006274 5.7e-33 146.0 136 52.2
RcHm_v2.0_Chr2g0145391 Rosa chinensis HOM05D005037 ORTHO05D006274 1.0e-29 135.2 80 86.2
BraA06t27783Z Brassica rapa HOM05D005037 ORTHO05D013118 2.0e-25 120.9 113 54.9
Actinidia15170 Actinidia chinensis HOM05D005037 ORTHO05D006274 1.7e-16 91.3 130 41.5
BraA01t00001Z Brassica rapa HOM05D005037 ORTHO05D013118 1.7e-16 91.3 96 52.1
PSO729G0072 Papaver somniferum HOM05D005037 ORTHO05D006274 4.1e-15 86.7 234 32.1
vmacro21119 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 4.5e-14 83.2 45 88.9


User provided reference genes

Program Settings