Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003777g0050 Nicotiana tabacum HOM05D005600 ORTHO05D006682 0.0e+00 1736.5 861 100.0
Sopen10g001510 Solanum pennellii HOM05D005600 ORTHO05D006682 0.0e+00 1490.7 871 86.0
Solyc10g005530.3 Solanum lycopersicum HOM05D005600 ORTHO05D006682 0.0e+00 1487.2 871 85.9
CAN.G492.77 Capsicum annuum HOM05D005600 ORTHO05D006682 0.0e+00 1482.6 872 85.9
Peaxi162Scf00666g00008 Petunia axillaris HOM05D005600 ORTHO05D006682 0.0e+00 1343.6 872 79.2
Cc05_g16390 Coffea canephora HOM05D005600 ORTHO05D006682 0.0e+00 1303.9 871 73.4
CSS0000494 Camellia sinensis var. sinensis HOM05D005600 ORTHO05D006682 0.0e+00 1300.8 871 74.9
Hma1.2p1_0151F.1_g067170 Hydrangea macrophylla HOM05D005600 ORTHO05D006682 0.0e+00 1297.0 870 73.4
GSVIVG01037230001 Vitis vinifera HOM05D005600 ORTHO05D006682 0.0e+00 1282.7 874 73.7
Dinv19587 Davidia involucrata HOM05D005600 ORTHO05D006682 0.0e+00 1264.2 871 73.0
CSS0013631 Camellia sinensis var. sinensis HOM05D005600 ORTHO05D006682 0.0e+00 1262.7 871 73.2
Actinidia35417 Actinidia chinensis HOM05D005600 ORTHO05D006682 0.0e+00 1242.6 871 71.9
TAR626G1503 Trochodendron aralioides HOM05D005600 ORTHO05D006682 0.0e+00 1235.7 880 70.1
vmacro09771 Vaccinium macrocarpon HOM05D005600 ORTHO05D006682 0.0e+00 1222.2 936 66.9
Atru.chr10.6 Acer truncatum HOM05D005600 ORTHO05D006682 0.0e+00 1219.9 871 70.3
Prupe.4G257300 Prunus persica HOM05D005600 ORTHO05D006682 0.0e+00 1219.1 873 70.1
QL01p017999 Quercus lobata HOM05D005600 ORTHO05D006682 0.0e+00 1217.2 871 70.7
Thecc.09G241700 Theobroma cacao HOM05D005600 ORTHO05D006682 0.0e+00 1216.8 874 70.4
Atru.chr10.100 Acer truncatum HOM05D005600 ORTHO05D006682 0.0e+00 1215.7 871 69.9
Atru.chr10.118 Acer truncatum HOM05D005600 ORTHO05D006682 0.0e+00 1215.7 871 69.9
MD03G1169700 Malus domestica HOM05D005600 ORTHO05D006682 0.0e+00 1213.4 878 69.2
Rhsim04G0002900 Rhododendron simsii HOM05D005600 ORTHO05D006682 0.0e+00 1213.0 1005 63.2
Ciclev10014237m.g Citrus clementina HOM05D005600 ORTHO05D006682 0.0e+00 1212.6 874 69.2
FAN16G1158 Fragaria x ananassa HOM05D005600 ORTHO05D006682 0.0e+00 1212.2 882 67.8
RcHm_v2.0_Chr5g0051141 Rosa chinensis HOM05D005600 ORTHO05D006682 0.0e+00 1211.4 873 68.6
Manes.06G161000 Manihot esculenta HOM05D005600 ORTHO05D006682 0.0e+00 1209.9 875 69.4
MSTRG.23390 Avicennia marina HOM05D005600 ORTHO05D006682 0.0e+00 1204.5 872 70.3
Cpa.g.sc84.9 Carica papaya HOM05D005600 ORTHO05D006682 0.0e+00 1204.1 864 69.9
FAN11G1201 Fragaria x ananassa HOM05D005600 ORTHO05D006682 0.0e+00 1204.1 898 66.8
CiPaw.13G153300 Carya illinoinensis HOM05D005600 ORTHO05D006682 0.0e+00 1203.3 874 69.1
FvH4_3g28270 Fragaria vesca HOM05D005600 ORTHO05D006682 0.0e+00 1200.7 873 67.9
Gorai.013G252000 Gossypium raimondii HOM05D005600 ORTHO05D006682 0.0e+00 1191.4 875 68.7
Migut.M01525 Erythranthe guttata HOM05D005600 ORTHO05D006682 0.0e+00 1189.9 872 69.3
Lalb_Chr22g0359901 Lupinus albus HOM05D005600 ORTHO05D006682 0.0e+00 1189.9 873 67.7
Cfa009829 Carpinus fangiana HOM05D005600 ORTHO05D006682 0.0e+00 1189.5 869 68.9
Gohir.A13G217400 Gossypium hirsutum HOM05D005600 ORTHO05D006682 0.0e+00 1189.1 875 68.3
PGR102G0248 Punica granatum HOM05D005600 ORTHO05D006682 0.0e+00 1188.7 875 68.3
Gohir.D13G221000 Gossypium hirsutum HOM05D005600 ORTHO05D006682 0.0e+00 1182.9 875 68.1
DCAR_009654 Daucus carota HOM05D005600 ORTHO05D006682 0.0e+00 1181.8 887 68.1
FAN21G1558 Fragaria x ananassa HOM05D005600 ORTHO05D006682 0.0e+00 1180.6 873 67.2
Potri.009G049200 Populus trichocarpa HOM05D005600 ORTHO05D006682 0.0e+00 1176.0 874 67.5
Oeu027716.3 Olea europaea HOM05D005600 ORTHO05D006682 0.0e+00 1174.8 928 66.2
HanXRQChr11g0335621 Helianthus annuus HOM05D005600 ORTHO05D006682 0.0e+00 1174.5 871 67.2
Haze_23192 Corylus avellana HOM05D005600 ORTHO05D006682 0.0e+00 1172.5 895 66.6
PSO210G6637 Papaver somniferum HOM05D005600 ORTHO05D006682 0.0e+00 1169.1 871 67.6
Aqoxy5G00694 Aquilegia oxysepala HOM05D005600 ORTHO05D006682 0.0e+00 1167.9 874 67.3
Sed0013981 Sechium edule HOM05D005600 ORTHO05D006682 0.0e+00 1163.7 874 66.5
TWI39G0768 Tripterygium wilfordii HOM05D005600 ORTHO05D006682 0.0e+00 1163.3 870 67.7
PSO832G1901 Papaver somniferum HOM05D005600 ORTHO05D006682 0.0e+00 1162.5 869 67.5
MELO3C015158.2 Cucumis melo HOM05D005600 ORTHO05D006682 0.0e+00 1161.4 873 66.4
Glyma.16G049600 Glycine max HOM05D005600 ORTHO05D006682 0.0e+00 1159.8 872 66.3
CANSAT54G1315 Cannabis sativa HOM05D005600 ORTHO05D006682 0.0e+00 1158.3 839 68.8
Lj1g0020466 Lotus japonicus HOM05D005600 ORTHO05D006682 0.0e+00 1154.8 873 66.7
Medtr7g083840 Medicago truncatula HOM05D005600 ORTHO05D006682 0.0e+00 1154.8 874 66.2
CsaV3_1G043080 Cucumis sativus L. HOM05D005600 ORTHO05D006682 0.0e+00 1154.4 873 66.4
TPR.G17475 Trifolium pratense HOM05D005600 ORTHO05D006682 0.0e+00 1154.4 873 66.0
THA.LOC104800443 Tarenaya hassleriana HOM05D005600 ORTHO05D006682 0.0e+00 1153.3 870 65.2
Nn3g21398 Nelumbo nucifera HOM05D005600 ORTHO05D006682 0.0e+00 1152.9 874 66.7
Phvul.001G086100 Phaseolus vulgaris HOM05D005600 ORTHO05D006682 0.0e+00 1152.5 871 65.4
FAN25G1678 Fragaria x ananassa HOM05D005600 ORTHO05D006682 0.0e+00 1148.7 869 66.2
ECA236G4915 Erigeron canadensis HOM05D005600 ORTHO05D006682 0.0e+00 1147.1 871 65.9
Lsat_1_v5_gn_7_110720 Lactuca sativa HOM05D005600 ORTHO05D006682 0.0e+00 1132.1 871 65.4
Lalb_Chr14g0364031 Lupinus albus HOM05D005600 ORTHO05D006682 0.0e+00 1132.1 847 66.8
Ah.14g082360 Amaranthus hybridus HOM05D005600 ORTHO05D006682 0.0e+00 1131.3 875 65.4
CSS0009005 Camellia sinensis var. sinensis HOM05D005600 ORTHO05D006682 0.0e+00 1129.8 892 66.5
Glyma.19G101600 Glycine max HOM05D005600 ORTHO05D006682 0.0e+00 1125.5 872 64.4
SGA_v2.0_scaffold7G03609 Striga asiatica HOM05D005600 ORTHO05D006682 0.0e+00 1125.2 949 62.3
Psat3g093920 Pisum sativum HOM05D005600 ORTHO05D006682 0.0e+00 1124.4 873 65.2
AUR62010954 Chenopodium quinoa HOM05D005600 ORTHO05D006682 0.0e+00 1124.0 874 64.3
EL10Ac2g02904 Beta vulgaris HOM05D005600 ORTHO05D006682 0.0e+00 1121.7 871 63.8
AUR62021465 Chenopodium quinoa HOM05D005600 ORTHO05D006682 0.0e+00 1121.3 874 64.1
unitig_37.g12201 Utricularia gibba HOM05D005600 ORTHO05D006682 0.0e+00 1119.0 884 64.3
Thhalv10022549m.g Eutrema salsugineum HOM05D005600 ORTHO05D006682 0.0e+00 1105.1 872 64.1
arahy.Tifrunner.gnm1.ann1.ZCX2T9 Arachis hypogaea HOM05D005600 ORTHO05D006682 0.0e+00 1102.4 873 64.0
BcaB08g34531 Brassica carinata HOM05D005600 ORTHO05D006682 0.0e+00 1102.0 871 63.7
CARHR104840 Cardamine hirsuta HOM05D005600 ORTHO05D006682 0.0e+00 1100.9 871 63.9
BraA03t13632Z Brassica rapa HOM05D005600 ORTHO05D006682 0.0e+00 1099.0 871 63.5
arahy.Tifrunner.gnm1.ann1.VD4ZCS Arachis hypogaea HOM05D005600 ORTHO05D006682 0.0e+00 1098.6 873 63.9
Hma1.2p1_0151F.1_g067180 Hydrangea macrophylla HOM05D005600 ORTHO05D006682 0.0e+00 1098.2 702 76.6
C03p55830 Brassica napus HOM05D005600 ORTHO05D006682 0.0e+00 1094.3 871 63.3
AL3G45350 Arabidopsis lyrata HOM05D005600 ORTHO05D006682 0.0e+00 1093.6 911 61.6
BolC3t17864H Brassica oleracea HOM05D005600 ORTHO05D006682 0.0e+00 1092.8 871 63.1
A03p44950 Brassica napus HOM05D005600 ORTHO05D006682 0.0e+00 1092.0 868 63.6
BcaC01g03123 Brassica carinata HOM05D005600 ORTHO05D006682 0.0e+00 1091.3 871 63.1
AT2G13540 Arabidopsis thaliana HOM05D005600 ORTHO05D006682 0.0e+00 1090.9 873 63.6
Carub.0003s2803 Capsella rubella HOM05D005600 ORTHO05D006682 0.0e+00 1085.1 871 62.9
ATR0618G105 Amborella trichopoda HOM05D005600 ORTHO05D006682 0.0e+00 1083.6 869 63.2
Duzib168G1213 Durio zibethinus HOM05D005600 ORTHO05D006682 1.3e-309 1066.2 870 62.6
Aa31sc869G10 Aethionema arabicum HOM05D005600 ORTHO05D006682 1.7e-309 1065.8 879 61.2
Sp3g26950 Schrenkiella parvula HOM05D005600 ORTHO05D006682 5.1e-306 1054.3 871 61.4
SalBow8G4663 Salvia bowleyana HOM05D005600 ORTHO05D006682 4.0e-303 1044.6 893 61.8
Sc24g0002960 Simmondsia chinensis HOM05D005600 ORTHO05D006682 1.0e-298 1030.0 793 65.8
Os03g0347200 Oryza sativa ssp. japonica HOM05D005600 ORTHO05D006682 6.2e-296 1020.8 875 58.5
Sabra09G0035700 Salix brachista HOM05D005600 ORTHO05D006682 2.5e-284 982.2 899 58.8
COL.COLO4_36487 Corchorus olitorius HOM05D005600 ORTHO05D006682 1.4e-282 976.5 736 68.2
Ca_08130_v3 Cicer arietinum L. HOM05D005600 ORTHO05D006682 6.7e-282 974.2 780 64.4
MD11G1186900 Malus domestica HOM05D005600 ORTHO05D006682 3.1e-279 965.3 658 72.6
Nitab4.5_0008957g0040 Nicotiana tabacum HOM05D005600 ORTHO05D006682 1.4e-268 929.9 484 97.9
ClCG03G012970 Citrullus lanatus HOM05D005600 ORTHO05D006682 2.0e-249 866.3 637 68.9
Pp3c6_18600 Physcomitrium patens HOM05D005600 ORTHO05D006682 5.0e-245 851.7 886 49.1
Pp3c5_6600 Physcomitrium patens HOM05D005600 ORTHO05D006682 6.3e-240 834.7 889 48.7
Mapoly0005s0051 Marchantia polymorpha HOM05D005600 ORTHO05D006682 8.3e-240 834.3 881 47.9
CDE01G0031 Ceratophyllum demersum HOM05D005600 ORTHO05D006682 1.5e-220 770.4 871 48.7
Lj2A14G43 Lonicera japonica HOM05D005600 ORTHO05D006682 9.2e-215 751.1 582 67.4
SMO236G0107 Selaginella moellendorffii HOM05D005600 ORTHO05D006682 5.6e-212 741.9 883 42.8
HPP92_006936 Vanilla planifolia HOM05D005600 ORTHO05D006682 5.1e-205 718.8 568 64.4
Eucgr.B03713 Eucalyptus grandis HOM05D005600 ORTHO05D006682 1.5e-201 707.2 495 71.5
CBR_g4015 Chara braunii HOM05D005600 ORTHO05D006682 1.6e-187 660.6 972 39.3
Zm00001eb016670 Zea mays HOM05D005600 ORTHO05D006682 3.7e-171 606.3 504 59.9
VMungo1383G0719 Vigna mungo HOM05D005600 ORTHO05D006682 3.4e-161 573.2 443 63.4
C09p12340 Brassica napus HOM05D005600 ORTHO05D006682 1.4e-159 567.8 856 41.1
SHI27472 Sapria himalayana HOM05D005600 ORTHO05D006682 2.5e-151 540.4 490 54.9
MD11G1196400 Malus domestica HOM05D005600 ORTHO05D006682 1.7e-147 527.7 390 65.9
SEGI_34765 Sequoiadendron giganteum HOM05D005600 ORTHO05D006682 3.0e-133 480.3 375 64.5
BcaC04g23081 Brassica carinata HOM05D005600 ORTHO05D006682 2.6e-124 450.7 601 44.4
Eucgr.B03714 Eucalyptus grandis HOM05D005600 ORTHO05D006682 7.0e-122 442.6 328 66.5
BolC9t54127H Brassica oleracea HOM05D005600 ORTHO05D006682 9.0e-85 319.3 389 48.8
CDE10G0769 Ceratophyllum demersum HOM05D005600 ORTHO05D006682 1.3e-78 298.9 171 82.5
ClCG03G012990 Citrullus lanatus HOM05D005600 ORTHO05D006682 1.3e-67 262.3 236 54.7
PRCOL_00004432 Prasinoderma coloniale HOM05D005600 ORTHO05D006682 5.5e-66 256.9 713 26.2
Lj2A14T50 Lonicera japonica HOM05D005600 ORTHO05D006682 6.5e-59 233.4 216 57.9
MCO11G503 Micromonas commoda HOM05D005600 ORTHO05D006682 2.7e-57 228.0 628 27.5
Sabra09G0035600 Salix brachista HOM05D005600 ORTHO05D006682 8.2e-30 136.7 120 55.0
Cfa024653 Carpinus fangiana HOM05D005600 ORTHO05D006682 1.1e-29 136.3 640 23.3
SEGI_12823 Sequoiadendron giganteum HOM05D005600 ORTHO05D006682 2.4e-29 135.2 99 61.6
VMungo1383G3426 Vigna mungo HOM05D000002 ORTHO05D000001 1.0e-27 129.8 92 60.9
Cre12.g524100 Chlamydomonas reinhardtii HOM05D005600 ORTHO05D006682 3.8e-27 127.9 369 27.4
SEGI_17739 Sequoiadendron giganteum HOM05D005600 ORTHO05D006682 1.5e-26 125.9 102 56.9
Atru.chr3.1844 Acer truncatum HOM05D005600 ORTHO05D006682 2.8e-22 111.7 71 69.0
MBI19_g44409_MAGBIO Magnolia biondii HOM05D005600 ORTHO05D006682 3.8e-19 101.3 100 50.0
SEGI_14354 Sequoiadendron giganteum HOM05D005600 ORTHO05D006682 1.0e-16 93.2 133 41.4
VMungo1383G0187 Vigna mungo HOM05D005600 ORTHO05D006682 1.4e-16 92.8 42 92.9
A09p10400 Brassica napus HOM05D005600 ORTHO05D006682 1.3e-14 86.3 90 51.1
SEGI_02402 Sequoiadendron giganteum HOM05D005600 ORTHO05D006682 6.8e-08 63.9 88 39.8
Hund17892 Selenicereus undatus HOM05D026955 ORTHO05D006682 8.9e-08 63.5 43 72.1
QL10p024418 Quercus lobata HOM05D005600 ORTHO05D006682 1.2e-07 63.2 52 57.7


User provided reference genes

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