Gene: CSS0000494

General Information

Structural Information

Species Camellia sinensis var. sinensis
Gene Identifier CSS0000494
Transcript Identifier CSS0000494.1
Gene Type Coding gene
Location Chr6 : 103429914-103453903 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005600
#Genes/#Species 137/97
Phylogenetic origin

ID ORTHO05D006682
#Genes/#Species 139/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid CSS0000494.1

Descriptions

Short descriptions
Ortholog descriptions

Description PREDICTED: nuclear cap-binding protein subunit 1 [Vitis vinifera]

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	IEA	InterPro	RNA metabolic process
GO:0045292	IEA	InterPro	mRNA cis splicing, via spliceosome
GO:0051028	IEA	InterPro	mRNA transport
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT2G13540
GO:0000394	ISO	PLAZA Integrative Orthology	RNA splicing, via endonucleolytic cleavage and ligation	AT2G13540
GO:0031053	ISO	PLAZA Integrative Orthology	primary miRNA processing	AT2G13540
GO:0048574	ISO	PLAZA Integrative Orthology	long-day photoperiodism, flowering	AT2G13540
GO:0051607	ISO	PLAZA Integrative Orthology	defense response to virus	AT2G13540

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000339	IEA	InterPro	RNA cap binding
GO:0003723	IEA	InterPro	RNA binding
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005846	IEA	InterPro	nuclear cap binding complex
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G13540

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR015172	MIF4G-like, type 1
IPR027159	Nuclear cap-binding protein subunit 1
IPR015174	MIF4G-like, type 2
IPR016021	MIF4G-like domain superfamily
IPR003890	MIF4G-like, type 3
IPR016024	Armadillo-type fold

Mapman id	Description
16.1.3.1	RNA processing.RNA 5'-end capping.CBP80-CBP20 mRNA Cap-Binding complex (CBC).component CBP80