Gene: Sopen10g001510

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g001510
  • Transcript Identifier Sopen10g001510.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 470784-487797 : negative

Gene Family Information

  • ID HOM05D005600
  • #Genes/#Species 137/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g001510.1

Descriptions

  • Description Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007 | Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 . | ABA HYPERSENSITIVE 1 (ABH1) | CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 , MIF4G-like, type 1 , Armadillo-type fold , MIF4G-like, type 3 , MIF4-like, type 1/2/3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
IEA
InterProRNA metabolic process
GO:0045292
IEA
InterPromRNA cis splicing, via spliceosome
GO:0051028
IEA
InterPromRNA transport
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G13540
GO:0000394
ISO
PLAZA Integrative OrthologyRNA splicing, via endonucleolytic cleavage and ligation AT2G13540
GO:0031053
ISO
PLAZA Integrative Orthologyprimary miRNA processing AT2G13540
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT2G13540
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT2G13540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000339
IEA
InterProRNA cap binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005846
IEA
InterPronuclear cap binding complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G13540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016021 MIF4G-like domain superfamily
IPR016024 Armadillo-type fold
IPR015172 MIF4G-like, type 1
IPR015174 MIF4G-like, type 2
IPR027159 Nuclear cap-binding protein subunit 1
IPR003890 MIF4G-like, type 3
Mapman id Description
16.1.3.1 RNA processing.RNA 5'-end capping.CBP80-CBP20 mRNA Cap-Binding complex (CBC).component CBP80