Gene: Zm00001eb016670

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb016670
  • Transcript Identifier Zm00001eb016670_T003
  • Gene Type Coding gene
  • Location 1 : 59162255-59169639 : positive

Gene Family Information

  • ID HOM05D005600
  • #Genes/#Species 137/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb016670_T003
  • pid Zm00001eb016670_P003
  • uniprot A0A1D6K2V7
  • uniprot A0A1D6K2V6
  • uniprot A0A1D6K2X8
  • uniprot A0A1D6K2V8
  • uniprot A0A1D6K2X5
  • uniprot A0A1D6K2V5
  • uniprot A0A1D6K2X7
  • uniprot A0A1D6K2W6
  • uniprot A0A1D6K2V4
  • uniprot A0A1D6K2X1
  • uniprot A0A1D6K2X0
  • uniprot A0A1D6K2W2
  • uniprot A0A1D6K2W1
  • uniprot A0A1D6K2X2
  • uniprot A0A317Y7U3
  • uniprot A0A317Y5U3
  • uniprot A0A097PNQ2
  • V4_identifier Zm00001d029133

Descriptions

  • Description Zm00001e001643
  • Description Nuclear cap-binding protein subunit 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0051028
IEA
InterPromRNA transport
GO:0045292
IEA
GOA DatabasemRNA cis splicing, via spliceosome
GO:0045292
IEA
InterPromRNA cis splicing, via spliceosome
GO:0016070
IEA
GOA DatabaseRNA metabolic process
GO:0016070
IEA
InterProRNA metabolic process
GO:0000184
IBA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0000394
IEA
GOA DatabaseRNA splicing, via endonucleolytic cleavage and ligation
GO:0031053
IEA
GOA Databaseprimary miRNA processing
GO:0009737
IEA
GOA Databaseresponse to abscisic acid
GO:0051607
IEA
GOA Databasedefense response to virus
GO:0048574
IEA
GOA Databaselong-day photoperiodism, flowering

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G13540
GO:0000339
IBA
IEA
GOA DatabaseRNA cap binding
GO:0000339
IEA
InterProRNA cap binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005846
IBA
IEA
GOA Databasenuclear cap binding complex
GO:0005846
IEA
InterPronuclear cap binding complex
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005845
IBA
GOA DatabasemRNA cap binding complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016021 MIF4G-like domain superfamily
IPR016024 Armadillo-type fold
IPR015172 MIF4G-like, type 1
IPR015174 MIF4G-like, type 2
IPR027159 Nuclear cap-binding protein subunit 1
Mapman id Description
16.1.3.1 RNA processing.RNA 5'-end capping.CBP80-CBP20 mRNA Cap-Binding complex (CBC).component CBP80