Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002972g0050 Nicotiana tabacum HOM05D005037 ORTHO05D006274 6.9e-199 697.2 373 100.0
Nitab4.5_0000174g0240 Nicotiana tabacum HOM05D005037 ORTHO05D006274 3.5e-195 684.9 373 97.3
Peaxi162Scf00066g01930 Petunia axillaris HOM05D005037 ORTHO05D006274 9.0e-191 670.2 373 94.9
PGSC0003DMG400024852 Solanum tuberosum HOM05D005037 ORTHO05D006274 1.0e-186 656.8 373 92.0
CAN.G657.3 Capsicum annuum HOM05D005037 ORTHO05D006274 3.2e-180 635.2 373 90.9
Sopen04g026520 Solanum pennellii HOM05D005037 ORTHO05D006274 4.0e-175 618.2 373 87.9
Solyc04g064570.3 Solanum lycopersicum HOM05D005037 ORTHO05D006274 2.6e-174 615.5 373 87.4
Cc10_g13130 Coffea canephora HOM05D005037 ORTHO05D006274 5.5e-164 581.3 373 79.6
TAR381G0890 Trochodendron aralioides HOM05D005037 ORTHO05D006274 2.1e-163 579.3 373 77.5
MSTRG.1382 Avicennia marina HOM05D005037 ORTHO05D006274 1.8e-162 576.2 373 77.5
Oeu002392.1 Olea europaea HOM05D005037 ORTHO05D006274 3.0e-162 575.5 373 78.3
Ciclev10001639m.g Citrus clementina HOM05D005037 ORTHO05D006274 9.7e-161 570.5 373 77.5
SalBow7G3864 Salvia bowleyana HOM05D005037 ORTHO05D006274 6.3e-160 567.8 373 76.7
Atru.chr13.1666 Acer truncatum HOM05D005037 ORTHO05D006274 4.1e-159 565.1 373 76.4
TWI32G0322 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 4.5e-158 561.6 374 76.5
Actinidia16585 Actinidia chinensis HOM05D005037 ORTHO05D006274 1.3e-157 560.1 373 77.2
Nn5g28553 Nelumbo nucifera HOM05D005037 ORTHO05D006274 6.5e-157 557.8 373 76.7
Hund17388 Selenicereus undatus HOM05D005037 ORTHO05D006274 1.9e-156 556.2 375 75.5
Migut.C01102 Erythranthe guttata HOM05D005037 ORTHO05D006274 2.5e-156 555.8 376 74.7
Thecc.08G141200 Theobroma cacao HOM05D005037 ORTHO05D006274 4.6e-155 551.6 384 74.7
Duzib041G0013 Durio zibethinus HOM05D005037 ORTHO05D006274 6.1e-155 551.2 383 73.9
Gohir.D02G074100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 6.1e-155 551.2 385 74.8
Eucgr.G02653 Eucalyptus grandis HOM05D005037 ORTHO05D006274 2.3e-154 549.3 373 75.9
Sc02g0004500 Simmondsia chinensis HOM05D005037 ORTHO05D006274 5.1e-154 548.1 374 75.4
TWI60G0144 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 1.1e-153 547.0 379 74.4
Gohir.A02G068100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 2.0e-153 546.2 385 74.0
Gorai.005G083500 Gossypium raimondii HOM05D005037 ORTHO05D006274 2.0e-153 546.2 386 74.6
PGR142G4097 Punica granatum HOM05D005037 ORTHO05D006274 9.7e-153 543.9 374 75.1
GSVIVG01010010001 Vitis vinifera HOM05D005037 ORTHO05D006274 2.8e-152 542.3 374 75.4
DCAR_015244 Daucus carota HOM05D005037 ORTHO05D006274 1.1e-151 540.4 381 72.7
EL10Ac4g08872 Beta vulgaris HOM05D005037 ORTHO05D006274 4.1e-151 538.5 380 72.1
Duzib116G0940 Durio zibethinus HOM05D005037 ORTHO05D006274 6.9e-151 537.7 384 72.4
EL10Ac1g01450 Beta vulgaris HOM05D005037 ORTHO05D006274 1.2e-150 537.0 380 71.8
Potri.002G073200 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.2e-150 537.0 373 72.7
Manes.02G173400 Manihot esculenta HOM05D005037 ORTHO05D006274 2.0e-150 536.2 373 73.2
Sp1g33080 Schrenkiella parvula HOM05D005037 ORTHO05D006274 5.9e-150 534.6 379 71.2
DCAR_019815 Daucus carota HOM05D005037 ORTHO05D006274 2.2e-149 532.7 381 71.1
Rhsim03G0093500 Rhododendron simsii HOM05D005037 ORTHO05D006274 2.2e-149 532.7 376 73.9
Aqoxy6G00356 Aquilegia oxysepala HOM05D005037 ORTHO05D006274 2.5e-148 529.3 373 72.7
Cpa.g.sc13.102 Carica papaya HOM05D005037 ORTHO05D006274 5.5e-148 528.1 389 69.9
CiPaw.16G018700 Carya illinoinensis HOM05D005037 ORTHO05D006274 5.5e-148 528.1 374 72.2
Sabra05G0142600 Salix brachista HOM05D005037 ORTHO05D006274 7.2e-148 527.7 374 72.5
BolC5t32377H Brassica oleracea HOM05D005037 ORTHO05D006274 1.0e-146 523.9 381 70.3
A05p21790 Brassica napus HOM05D005037 ORTHO05D006274 1.4e-146 523.5 381 70.1
BraA05t21100Z Brassica rapa HOM05D005037 ORTHO05D006274 1.4e-146 523.5 381 70.1
vmacro08710 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 1.4e-146 523.5 376 72.3
CANSAT54G1160 Cannabis sativa HOM05D005037 ORTHO05D006274 5.2e-146 521.5 380 70.5
BcaC05g27657 Brassica carinata HOM05D005037 ORTHO05D006274 6.7e-146 521.2 381 69.8
A10p07730 Brassica napus HOM05D005037 ORTHO05D006274 6.7e-146 521.2 379 70.4
BraSC36t46032Z Brassica rapa HOM05D005037 ORTHO05D006274 6.7e-146 521.2 379 70.4
AL1G51980 Arabidopsis lyrata HOM05D005037 ORTHO05D006274 8.8e-146 520.8 385 68.8
C05p36450 Brassica napus HOM05D005037 ORTHO05D006274 8.8e-146 520.8 381 69.8
MD05G1011400 Malus domestica HOM05D005037 ORTHO05D006274 2.0e-145 519.6 394 67.5
Carub.0001s3480 Capsella rubella HOM05D005037 ORTHO05D006274 2.6e-145 519.2 385 67.5
Thhalv10011594m.g Eutrema salsugineum HOM05D005037 ORTHO05D006274 2.6e-145 519.2 381 69.3
ATR1136G011 Amborella trichopoda HOM05D005037 ORTHO05D006274 3.3e-145 518.8 373 71.0
AUR62027497 Chenopodium quinoa HOM05D005037 ORTHO05D006274 3.3e-145 518.8 375 71.5
BcaB02g11416 Brassica carinata HOM05D005037 ORTHO05D006274 5.7e-145 518.1 379 69.1
BcaB07g33972 Brassica carinata HOM05D005037 ORTHO05D006274 5.7e-145 518.1 379 70.2
AT1G43860 Arabidopsis thaliana HOM05D005037 ORTHO05D006274 7.4e-145 517.7 385 67.5
Potri.005G186700 Populus trichocarpa HOM05D005037 ORTHO05D006274 7.4e-145 517.7 374 71.1
AUR62033983 Chenopodium quinoa HOM05D005037 ORTHO05D006274 1.7e-144 516.5 375 71.5
Haze_17689 Corylus avellana HOM05D005037 ORTHO05D006274 2.8e-144 515.8 377 71.6
CARHR035400 Cardamine hirsuta HOM05D005037 ORTHO05D006274 3.7e-144 515.4 383 67.6
SGA_v2.0_scaffold25G11149 Striga asiatica HOM05D005037 ORTHO05D006274 3.7e-144 515.4 401 70.6
Ah.10g032080 Amaranthus hybridus HOM05D005037 ORTHO05D006274 4.8e-144 515.0 375 70.7
THA.LOC104798858 Tarenaya hassleriana HOM05D005037 ORTHO05D006274 6.3e-144 514.6 392 68.9
ECA233G3664 Erigeron canadensis HOM05D005037 ORTHO05D006274 1.4e-143 513.5 360 72.5
HanXRQChr04g0109491 Helianthus annuus HOM05D005037 ORTHO05D006274 5.3e-143 511.5 373 71.3
Prupe.8G016400 Prunus persica HOM05D005037 ORTHO05D006274 1.0e-141 507.3 394 66.5
Aa31LG6G9500 Aethionema arabicum HOM05D005037 ORTHO05D006274 1.3e-141 506.9 397 67.5
Lsat_1_v5_gn_1_9740 Lactuca sativa HOM05D005037 ORTHO05D006274 3.8e-141 505.4 385 68.3
RcHm_v2.0_Chr6g0277561 Rosa chinensis HOM05D005037 ORTHO05D006274 3.2e-140 502.3 381 67.7
VMungo0540G1405 Vigna mungo HOM05D005037 ORTHO05D006274 3.2e-140 502.3 374 68.4
Phvul.006G102500 Phaseolus vulgaris HOM05D005037 ORTHO05D006274 9.4e-140 500.7 374 69.0
HPP92_020501 Vanilla planifolia HOM05D005037 ORTHO05D006274 1.6e-139 500.0 373 69.4
CDE02G2089 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 2.1e-139 499.6 375 68.5
PSO541G3185 Papaver somniferum HOM05D005037 ORTHO05D006274 4.7e-139 498.4 382 68.3
arahy.Tifrunner.gnm1.ann1.HCD3KF Arachis hypogaea HOM05D005037 ORTHO05D006274 8.0e-139 497.7 377 68.4
PSO675G6067 Papaver somniferum HOM05D005037 ORTHO05D006274 8.0e-139 497.7 383 68.4
arahy.Tifrunner.gnm1.ann1.E7XDIB Arachis hypogaea HOM05D005037 ORTHO05D006274 1.4e-138 496.9 377 68.2
FAN24G2486 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.8e-138 496.5 391 66.0
FvH4_2g15010 Fragaria vesca HOM05D005037 ORTHO05D006274 2.3e-138 496.1 391 66.2
arahy.Tifrunner.gnm1.ann1.RY8QGI Arachis hypogaea HOM05D005037 ORTHO05D006274 8.8e-138 494.2 376 67.8
Lalb_Chr21g0311851 Lupinus albus HOM05D005037 ORTHO05D006274 4.4e-137 491.9 374 67.9
QL09p029039 Quercus lobata HOM05D005037 ORTHO05D006274 7.5e-137 491.1 376 67.8
Lj4g0018852 Lotus japonicus HOM05D005037 ORTHO05D006274 1.3e-136 490.3 374 69.3
Lj1g0018953 Lotus japonicus HOM05D005037 ORTHO05D006274 4.8e-136 488.4 374 69.3
Lalb_Chr02g0149921 Lupinus albus HOM05D005037 ORTHO05D006274 1.1e-135 487.3 375 66.9
Lj4A690T47 Lonicera japonica HOM05D005037 ORTHO05D006274 2.4e-135 486.1 300 82.3
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 5.3e-135 485.0 365 67.1
MELO3C010584.2 Cucumis melo HOM05D005037 ORTHO05D006274 7.0e-135 484.6 377 67.6
Sed0001170 Sechium edule HOM05D005037 ORTHO05D006274 7.0e-135 484.6 375 66.9
PSO421G0325 Papaver somniferum HOM05D005037 ORTHO05D006274 9.1e-135 484.2 380 65.3
FAN27G1276 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.6e-134 483.4 391 64.7
PSO673G0007 Papaver somniferum HOM05D005037 ORTHO05D006274 1.6e-134 483.4 380 65.5
CSS0001186 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.0e-134 483.0 327 74.9
Ca_30116_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 4.5e-134 481.9 375 66.1
ClCG08G002740 Citrullus lanatus HOM05D005037 ORTHO05D006274 1.0e-133 480.7 377 66.3
CsaV3_6G035600 Cucumis sativus L. HOM05D005037 ORTHO05D006274 1.0e-133 480.7 377 67.1
Glyma.14G119400 Glycine max HOM05D005037 ORTHO05D006274 1.3e-133 480.3 374 66.8
Medtr6g085170 Medicago truncatula HOM05D005037 ORTHO05D006274 2.1e-131 473.0 374 65.0
Psat1g039480 Pisum sativum HOM05D005037 ORTHO05D006274 4.7e-131 471.9 375 64.3
TPR.G31447 Trifolium pratense HOM05D005037 ORTHO05D006274 2.3e-130 469.5 375 64.5
ECA234G0804 Erigeron canadensis HOM05D005037 ORTHO05D006274 6.3e-128 461.5 369 65.6
Glyma.11G142700 Glycine max HOM05D005037 ORTHO05D006274 2.4e-127 459.5 374 64.4
Dinv41137 Davidia involucrata HOM05D005037 ORTHO05D006274 5.0e-125 451.8 360 68.6
unitig_747.g21501 Utricularia gibba HOM05D005037 ORTHO05D006274 7.2e-124 448.0 291 79.7
Oeu001556.2 Olea europaea HOM05D005037 ORTHO05D006274 2.1e-123 446.4 366 64.5
Os08g0107500 Oryza sativa ssp. japonica HOM05D005037 ORTHO05D006274 1.8e-122 443.4 374 59.9
SHI09275 Sapria himalayana HOM05D005037 ORTHO05D006274 2.3e-122 443.0 376 63.3
SEGI_36163 Sequoiadendron giganteum HOM05D005037 ORTHO05D006274 4.0e-122 442.2 381 62.5
Zm00001eb260230 Zea mays HOM05D005037 ORTHO05D006274 6.3e-120 434.9 374 59.6
PSO673G0037 Papaver somniferum HOM05D005037 ORTHO05D006274 7.8e-118 427.9 356 63.2
CSS0023189 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.1e-116 424.1 327 68.2
HPP92_020498 Vanilla planifolia HOM05D005037 ORTHO05D006274 1.6e-115 420.2 327 67.9
Pp3c4_180 Physcomitrium patens HOM05D005037 ORTHO05D006274 7.8e-110 401.4 386 54.1
SMO348G0060 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 1.7e-109 400.2 371 56.3
COL.COLO4_33811 Corchorus olitorius HOM05D005037 ORTHO05D006274 5.2e-106 388.7 385 57.1
AagrBONN_evm.TU.Sc2ySwM_117.3544 Anthoceros agrestis HOM05D005037 ORTHO05D006274 6.0e-102 375.2 371 52.6
Ca_25512_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 5.6e-100 368.6 317 60.6
vmacro21120 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 2.0e-97 360.1 287 64.1
Cfa018383 Carpinus fangiana HOM05D005037 ORTHO05D006274 5.8e-97 358.6 308 62.0
FAN20G2613 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.8e-82 310.5 189 84.1
FAN15G0656 Fragaria x ananassa HOM05D005037 ORTHO05D006274 1.9e-71 273.9 150 90.7
SMO272G0010 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 3.0e-69 266.5 161 82.6
PSO729G0215 Papaver somniferum HOM05D005037 ORTHO05D006274 4.3e-68 262.7 258 57.0
Cre01.g017500 Chlamydomonas reinhardtii HOM05D005037 ORTHO05D006274 7.4e-68 261.9 251 52.2
PRCOL_00006527 Prasinoderma coloniale HOM05D005037 ORTHO05D006274 8.1e-67 258.5 381 41.2
PSO017G3306 Papaver somniferum HOM05D005037 ORTHO05D006274 7.9e-62 241.9 214 60.7
CSS0016864 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 4.2e-55 219.5 159 71.7
MD05G1011500 Malus domestica HOM05D005037 ORTHO05D006274 9.3e-55 218.4 249 49.4
CBR_g48721 Chara braunii HOM05D005037 ORTHO05D006274 3.3e-52 209.9 326 39.9
CSS0012113 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.2e-51 207.2 174 64.4
MCO07G375 Micromonas commoda HOM05D005037 ORTHO05D006274 6.3e-51 205.7 181 55.2
CSS0029081 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 7.7e-49 198.7 174 62.6
Mapoly0003s0227 Marchantia polymorpha HOM05D005037 ORTHO05D006274 2.5e-39 167.2 228 39.5
C06p00420 Brassica napus HOM05D005037 ORTHO05D006274 3.6e-38 163.3 133 67.7
C06p00390 Brassica napus HOM05D005037 ORTHO05D006274 7.9e-38 162.2 133 66.9
Aa31LG6G9600 Aethionema arabicum HOM05D005037 ORTHO05D006274 7.4e-36 155.6 172 49.4
vmacro21119 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 7.0e-34 149.1 121 67.8
RcHm_v2.0_Chr2g0145391 Rosa chinensis HOM05D005037 ORTHO05D006274 8.5e-32 142.1 81 87.7
Actinidia15170 Actinidia chinensis HOM05D005037 ORTHO05D006274 1.7e-27 127.9 96 61.5
Actinidia15171 Actinidia chinensis HOM05D005037 ORTHO05D006274 6.5e-24 115.9 84 70.2
PSO729G0072 Papaver somniferum HOM05D005037 ORTHO05D006274 1.3e-19 101.7 178 41.6
BraA06t27783Z Brassica rapa HOM05D005037 ORTHO05D013118 2.2e-19 100.9 128 46.9
CSS0019617 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 2.9e-16 90.5 51 84.3
CSS0038364 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 2.9e-16 90.5 51 84.3
BraA01t00001Z Brassica rapa HOM05D005037 ORTHO05D013118 2.7e-09 67.4 87 46.0


User provided reference genes

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