Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000174g0240 Nicotiana tabacum HOM05D005037 ORTHO05D006274 6.6e-202 707.2 373 100.0
Nitab4.5_0002972g0050 Nicotiana tabacum HOM05D005037 ORTHO05D006274 2.7e-195 685.3 373 97.3
Peaxi162Scf00066g01930 Petunia axillaris HOM05D005037 ORTHO05D006274 8.1e-192 673.7 373 94.9
PGSC0003DMG400024852 Solanum tuberosum HOM05D005037 ORTHO05D006274 9.9e-190 666.8 373 93.0
CAN.G657.3 Capsicum annuum HOM05D005037 ORTHO05D006274 1.3e-181 639.8 373 90.9
Sopen04g026520 Solanum pennellii HOM05D005037 ORTHO05D006274 2.5e-177 625.5 373 88.7
Solyc04g064570.3 Solanum lycopersicum HOM05D005037 ORTHO05D006274 1.6e-176 622.9 373 88.2
Cc10_g13130 Coffea canephora HOM05D005037 ORTHO05D006274 5.0e-165 584.7 373 79.6
TAR381G0890 Trochodendron aralioides HOM05D005037 ORTHO05D006274 9.3e-164 580.5 373 76.9
MSTRG.1382 Avicennia marina HOM05D005037 ORTHO05D006274 1.2e-163 580.1 373 77.2
Oeu002392.1 Olea europaea HOM05D005037 ORTHO05D006274 3.6e-163 578.6 373 78.0
Ciclev10001639m.g Citrus clementina HOM05D005037 ORTHO05D006274 4.3e-161 571.6 373 76.9
SalBow7G3864 Salvia bowleyana HOM05D005037 ORTHO05D006274 1.6e-160 569.7 373 76.1
Atru.chr13.1666 Acer truncatum HOM05D005037 ORTHO05D006274 1.1e-159 567.0 373 76.1
TWI32G0322 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 2.0e-158 562.8 374 75.9
Actinidia16585 Actinidia chinensis HOM05D005037 ORTHO05D006274 3.4e-158 562.0 373 76.9
Nn5g28553 Nelumbo nucifera HOM05D005037 ORTHO05D006274 1.7e-157 559.7 373 76.1
Migut.C01102 Erythranthe guttata HOM05D005037 ORTHO05D006274 2.2e-157 559.3 375 74.1
Hund17388 Selenicereus undatus HOM05D005037 ORTHO05D006274 3.8e-157 558.5 375 75.2
Gohir.D02G074100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 7.2e-156 554.3 385 74.5
Thecc.08G141200 Theobroma cacao HOM05D005037 ORTHO05D006274 2.1e-155 552.7 384 74.2
Duzib041G0013 Durio zibethinus HOM05D005037 ORTHO05D006274 2.7e-155 552.4 383 73.4
Eucgr.G02653 Eucalyptus grandis HOM05D005037 ORTHO05D006274 7.9e-155 550.8 373 75.3
Sc02g0004500 Simmondsia chinensis HOM05D005037 ORTHO05D006274 7.9e-155 550.8 374 75.1
Gohir.A02G068100 Gossypium hirsutum HOM05D005037 ORTHO05D006274 2.3e-154 549.3 385 73.8
Gorai.005G083500 Gossypium raimondii HOM05D005037 ORTHO05D006274 2.3e-154 549.3 386 74.4
PGR142G4097 Punica granatum HOM05D005037 ORTHO05D006274 2.3e-154 549.3 374 75.4
TWI60G0144 Tripterygium wilfordii HOM05D005037 ORTHO05D006274 6.7e-154 547.7 379 74.1
GSVIVG01010010001 Vitis vinifera HOM05D005037 ORTHO05D006274 1.3e-152 543.5 374 74.9
DCAR_015244 Daucus carota HOM05D005037 ORTHO05D006274 1.1e-151 540.4 381 72.2
Potri.002G073200 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.4e-151 540.0 373 72.4
EL10Ac4g08872 Beta vulgaris HOM05D005037 ORTHO05D006274 1.8e-151 539.7 380 71.6
Manes.02G173400 Manihot esculenta HOM05D005037 ORTHO05D006274 1.8e-151 539.7 373 72.9
Sp1g33080 Schrenkiella parvula HOM05D005037 ORTHO05D006274 2.4e-151 539.3 379 71.2
Duzib116G0940 Durio zibethinus HOM05D005037 ORTHO05D006274 3.1e-151 538.9 384 71.9
EL10Ac1g01450 Beta vulgaris HOM05D005037 ORTHO05D006274 5.3e-151 538.1 380 71.3
CiPaw.16G018700 Carya illinoinensis HOM05D005037 ORTHO05D006274 9.1e-151 537.3 374 72.5
Rhsim03G0093500 Rhododendron simsii HOM05D005037 ORTHO05D006274 1.0e-149 533.9 376 73.7
BolC5t32377H Brassica oleracea HOM05D005037 ORTHO05D006274 1.7e-149 533.1 379 70.7
DCAR_019815 Daucus carota HOM05D005037 ORTHO05D006274 2.2e-149 532.7 381 70.6
A05p21790 Brassica napus HOM05D005037 ORTHO05D006274 8.5e-149 530.8 381 70.3
BraA05t21100Z Brassica rapa HOM05D005037 ORTHO05D006274 8.5e-149 530.8 381 70.3
Aqoxy6G00356 Aquilegia oxysepala HOM05D005037 ORTHO05D006274 1.1e-148 530.4 373 72.1
BcaC05g27657 Brassica carinata HOM05D005037 ORTHO05D006274 1.1e-148 530.4 379 70.2
A10p07730 Brassica napus HOM05D005037 ORTHO05D006274 1.1e-148 530.4 379 71.0
BraSC36t46032Z Brassica rapa HOM05D005037 ORTHO05D006274 1.1e-148 530.4 379 71.0
C05p36450 Brassica napus HOM05D005037 ORTHO05D006274 1.4e-148 530.0 379 70.2
Sabra05G0142600 Salix brachista HOM05D005037 ORTHO05D006274 1.4e-148 530.0 374 72.2
Cpa.g.sc13.102 Carica papaya HOM05D005037 ORTHO05D006274 1.9e-148 529.6 379 71.0
AL1G51980 Arabidopsis lyrata HOM05D005037 ORTHO05D006274 2.5e-148 529.3 385 69.4
CANSAT54G1160 Cannabis sativa HOM05D005037 ORTHO05D006274 7.2e-148 527.7 380 70.5
Carub.0001s3480 Capsella rubella HOM05D005037 ORTHO05D006274 7.2e-148 527.7 385 68.1
BcaB02g11416 Brassica carinata HOM05D005037 ORTHO05D006274 9.4e-148 527.3 379 69.7
vmacro08710 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 9.4e-148 527.3 376 72.1
Thhalv10011594m.g Eutrema salsugineum HOM05D005037 ORTHO05D006274 1.6e-147 526.6 381 69.6
AT1G43860 Arabidopsis thaliana HOM05D005037 ORTHO05D006274 2.1e-147 526.2 385 68.1
BcaB07g33972 Brassica carinata HOM05D005037 ORTHO05D006274 2.1e-147 526.2 381 69.8
CARHR035400 Cardamine hirsuta HOM05D005037 ORTHO05D006274 3.6e-147 525.4 386 68.4
ATR1136G011 Amborella trichopoda HOM05D005037 ORTHO05D006274 1.4e-146 523.5 373 71.0
MD05G1011400 Malus domestica HOM05D005037 ORTHO05D006274 1.4e-146 523.5 394 67.3
SGA_v2.0_scaffold25G11149 Striga asiatica HOM05D005037 ORTHO05D006274 6.7e-146 521.2 401 70.8
Potri.005G186700 Populus trichocarpa HOM05D005037 ORTHO05D006274 1.1e-145 520.4 374 70.9
AUR62027497 Chenopodium quinoa HOM05D005037 ORTHO05D006274 1.5e-145 520.0 375 70.9
Haze_17689 Corylus avellana HOM05D005037 ORTHO05D006274 2.0e-145 519.6 377 71.4
THA.LOC104798858 Tarenaya hassleriana HOM05D005037 ORTHO05D006274 2.6e-145 519.2 392 68.6
AUR62033983 Chenopodium quinoa HOM05D005037 ORTHO05D006274 7.4e-145 517.7 375 70.9
Ah.10g032080 Amaranthus hybridus HOM05D005037 ORTHO05D006274 1.3e-144 516.9 375 70.1
HanXRQChr04g0109491 Helianthus annuus HOM05D005037 ORTHO05D006274 1.3e-144 516.9 373 70.8
Aa31LG6G9500 Aethionema arabicum HOM05D005037 ORTHO05D006274 6.3e-144 514.6 397 67.8
CDE02G2089 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 6.3e-144 514.6 375 69.6
ECA233G3664 Erigeron canadensis HOM05D005037 ORTHO05D006274 6.3e-144 514.6 360 71.9
Prupe.8G016400 Prunus persica HOM05D005037 ORTHO05D006274 1.8e-143 513.1 394 66.5
VMungo0540G1405 Vigna mungo HOM05D005037 ORTHO05D006274 2.0e-142 509.6 374 68.4
Lsat_1_v5_gn_1_9740 Lactuca sativa HOM05D005037 ORTHO05D006274 4.5e-142 508.4 385 68.1
Phvul.006G102500 Phaseolus vulgaris HOM05D005037 ORTHO05D006274 1.0e-141 507.3 374 69.0
RcHm_v2.0_Chr6g0277561 Rosa chinensis HOM05D005037 ORTHO05D006274 2.2e-141 506.1 381 67.5
arahy.Tifrunner.gnm1.ann1.HCD3KF Arachis hypogaea HOM05D005037 ORTHO05D006274 8.5e-141 504.2 377 68.4
arahy.Tifrunner.gnm1.ann1.E7XDIB Arachis hypogaea HOM05D005037 ORTHO05D006274 1.5e-140 503.4 377 68.2
PSO541G3185 Papaver somniferum HOM05D005037 ORTHO05D006274 3.2e-140 502.3 385 67.8
HPP92_020501 Vanilla planifolia HOM05D005037 ORTHO05D006274 4.2e-140 501.9 373 69.2
FvH4_2g15010 Fragaria vesca HOM05D005037 ORTHO05D006274 5.5e-140 501.5 391 66.2
FAN24G2486 Fragaria x ananassa HOM05D005037 ORTHO05D006274 5.5e-140 501.5 391 66.0
arahy.Tifrunner.gnm1.ann1.RY8QGI Arachis hypogaea HOM05D005037 ORTHO05D006274 9.4e-140 500.7 376 67.8
PSO675G6067 Papaver somniferum HOM05D005037 ORTHO05D006274 9.4e-140 500.7 385 67.5
Lalb_Chr21g0311851 Lupinus albus HOM05D005037 ORTHO05D006274 4.7e-139 498.4 375 68.5
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 1.8e-138 496.5 365 67.7
QL09p029039 Quercus lobata HOM05D005037 ORTHO05D006274 5.2e-138 495.0 376 67.6
Lalb_Chr02g0149921 Lupinus albus HOM05D005037 ORTHO05D006274 1.2e-137 493.8 376 67.3
MELO3C010584.2 Cucumis melo HOM05D005037 ORTHO05D006274 3.3e-137 492.3 377 67.9
Sed0001170 Sechium edule HOM05D005037 ORTHO05D006274 3.3e-137 492.3 375 67.2
Ca_30116_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 2.2e-136 489.6 375 66.4
PSO421G0325 Papaver somniferum HOM05D005037 ORTHO05D006274 2.2e-136 489.6 372 66.1
ClCG08G002740 Citrullus lanatus HOM05D005037 ORTHO05D006274 4.8e-136 488.4 377 66.6
CsaV3_6G035600 Cucumis sativus L. HOM05D005037 ORTHO05D006274 4.8e-136 488.4 377 67.4
Lj4g0018852 Lotus japonicus HOM05D005037 ORTHO05D006274 4.8e-136 488.4 374 67.6
PSO673G0007 Papaver somniferum HOM05D005037 ORTHO05D006274 4.8e-136 488.4 372 66.1
FAN27G1276 Fragaria x ananassa HOM05D005037 ORTHO05D006274 8.2e-136 487.6 391 64.5
Lj1g0018953 Lotus japonicus HOM05D005037 ORTHO05D006274 1.8e-135 486.5 374 67.6
CSS0001186 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.4e-135 486.1 327 74.6
Glyma.14G119400 Glycine max HOM05D005037 ORTHO05D006274 4.1e-135 485.3 374 66.8
Lj4A690T47 Lonicera japonica HOM05D005037 ORTHO05D006274 2.7e-134 482.6 321 77.3
Medtr6g085170 Medicago truncatula HOM05D005037 ORTHO05D006274 1.7e-133 479.9 375 65.6
Psat1g039480 Pisum sativum HOM05D005037 ORTHO05D006274 5.0e-133 478.4 375 64.3
TPR.G31447 Trifolium pratense HOM05D005037 ORTHO05D006274 1.1e-132 477.2 375 64.8
ECA234G0804 Erigeron canadensis HOM05D005037 ORTHO05D006274 5.2e-130 468.4 369 65.6
Glyma.11G142700 Glycine max HOM05D005037 ORTHO05D006274 3.4e-129 465.7 374 64.4
Dinv41137 Davidia involucrata HOM05D005037 ORTHO05D006274 2.3e-125 453.0 360 68.1
Oeu001556.2 Olea europaea HOM05D005037 ORTHO05D006274 5.0e-125 451.8 366 64.8
SEGI_36163 Sequoiadendron giganteum HOM05D005037 ORTHO05D006274 4.2e-124 448.7 381 63.0
SHI09275 Sapria himalayana HOM05D005037 ORTHO05D006274 7.2e-124 448.0 376 63.3
Os08g0107500 Oryza sativa ssp. japonica HOM05D005037 ORTHO05D006274 1.6e-123 446.8 374 60.2
unitig_747.g21501 Utricularia gibba HOM05D005037 ORTHO05D006274 2.8e-123 446.0 291 79.4
Zm00001eb260230 Zea mays HOM05D005037 ORTHO05D006274 1.8e-122 443.4 374 60.2
PSO673G0037 Papaver somniferum HOM05D005037 ORTHO05D006274 3.1e-119 432.6 352 63.1
CSS0023189 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 1.3e-117 427.2 327 67.9
HPP92_020498 Vanilla planifolia HOM05D005037 ORTHO05D006274 4.3e-116 422.2 327 67.6
Pp3c4_180 Physcomitrium patens HOM05D005037 ORTHO05D006274 5.4e-111 405.2 398 53.8
SMO348G0060 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 7.0e-111 404.8 371 56.3
COL.COLO4_33811 Corchorus olitorius HOM05D005037 ORTHO05D006274 1.1e-106 391.0 385 56.9
Ca_25512_v3 Cicer arietinum L. HOM05D005037 ORTHO05D006274 2.7e-102 376.3 317 60.9
AagrBONN_evm.TU.Sc2ySwM_117.3544 Anthoceros agrestis HOM05D005037 ORTHO05D006274 1.7e-101 373.6 371 52.8
Cfa018383 Carpinus fangiana HOM05D005037 ORTHO05D006274 4.0e-98 362.5 308 61.7
vmacro21120 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 6.8e-98 361.7 287 63.8
FAN20G2613 Fragaria x ananassa HOM05D005037 ORTHO05D006274 6.9e-82 308.5 189 83.6
FAN15G0656 Fragaria x ananassa HOM05D005037 ORTHO05D006274 7.1e-71 271.9 150 90.0
SMO272G0010 Selaginella moellendorffii HOM05D005037 ORTHO05D006274 8.7e-69 265.0 161 82.0
PRCOL_00006527 Prasinoderma coloniale HOM05D005037 ORTHO05D006274 4.3e-68 262.7 381 40.7
Cre01.g017500 Chlamydomonas reinhardtii HOM05D005037 ORTHO05D006274 3.7e-67 259.6 251 51.8
PSO729G0215 Papaver somniferum HOM05D005037 ORTHO05D006274 4.8e-67 259.2 258 56.2
PSO017G3306 Papaver somniferum HOM05D005037 ORTHO05D006274 7.9e-62 241.9 329 45.0
MD05G1011500 Malus domestica HOM05D005037 ORTHO05D006274 4.5e-57 226.1 245 48.6
CBR_g48721 Chara braunii HOM05D005037 ORTHO05D006274 1.6e-54 217.6 326 40.5
CSS0016864 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 4.6e-54 216.1 159 70.4
CSS0012113 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 6.3e-51 205.7 174 63.8
MCO07G375 Micromonas commoda HOM05D005037 ORTHO05D006274 8.2e-51 205.3 181 55.2
CSS0029081 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.2e-48 197.2 174 62.1
Mapoly0003s0227 Marchantia polymorpha HOM05D005037 ORTHO05D006274 1.2e-41 174.9 228 39.5
Aa31LG6G9600 Aethionema arabicum HOM05D005037 ORTHO05D006274 7.2e-39 165.6 172 51.2
C06p00390 Brassica napus HOM05D005037 ORTHO05D006274 1.0e-37 161.8 133 66.9
C06p00420 Brassica napus HOM05D005037 ORTHO05D006274 1.4e-37 161.4 133 66.9
vmacro21119 Vaccinium macrocarpon HOM05D005037 ORTHO05D006274 7.0e-34 149.1 121 67.8
RcHm_v2.0_Chr2g0145391 Rosa chinensis HOM05D005037 ORTHO05D006274 3.2e-31 140.2 81 86.4
Actinidia15170 Actinidia chinensis HOM05D005037 ORTHO05D006274 4.8e-27 126.3 96 60.4
Actinidia15171 Actinidia chinensis HOM05D005037 ORTHO05D006274 6.5e-24 115.9 84 70.2
BraA06t27783Z Brassica rapa HOM05D005037 ORTHO05D013118 3.2e-23 113.6 128 50.0
PSO729G0072 Papaver somniferum HOM05D005037 ORTHO05D006274 1.3e-19 101.7 178 41.6
CSS0019617 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 2.9e-16 90.5 51 84.3
CSS0038364 Camellia sinensis var. sinensis HOM05D010284 ORTHO05D010737 2.9e-16 90.5 51 84.3
BraA01t00001Z Brassica rapa HOM05D005037 ORTHO05D013118 4.0e-13 80.1 87 50.6


User provided reference genes

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