Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.2e-94 349.7 164 100.0
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.1e-76 290.0 191 75.4
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 7.2e-76 287.3 191 74.3
Migut.I00236 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.6e-70 268.9 155 85.2
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 4.0e-66 255.0 171 74.3
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.3e-61 240.0 173 70.5
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.5e-60 236.5 191 65.4
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 1.2e-49 200.3 191 56.0
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 1.7e-48 196.4 191 53.9
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 6.6e-45 184.5 189 51.3
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 1.1e-44 183.7 164 56.7
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 1.5e-44 183.3 193 52.3
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 5.6e-44 181.4 192 50.5
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 4.7e-43 178.3 191 48.2
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 8.0e-43 177.6 192 50.0
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 1.4e-42 176.8 191 49.7
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 2.3e-42 176.0 191 46.6
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.3e-42 176.0 191 47.6
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 3.0e-42 175.6 200 47.5
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 5.2e-42 174.9 191 49.7
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 5.2e-42 174.9 191 47.1
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 6.8e-42 174.5 191 46.1
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 8.9e-42 174.1 191 47.6
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 8.9e-42 174.1 191 49.2
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 1.5e-41 173.3 191 49.2
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 2.6e-41 172.6 191 49.2
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 3.4e-41 172.2 191 47.1
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 4.4e-41 171.8 191 48.2
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 9.8e-41 170.6 192 48.4
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 1.3e-40 170.2 191 47.6
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.7e-40 169.9 188 50.5
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 1.7e-40 169.9 191 49.2
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 2.2e-40 169.5 188 47.9
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 2.2e-40 169.5 192 49.5
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 3.7e-40 168.7 192 46.9
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 4.9e-40 168.3 191 47.6
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 4.9e-40 168.3 191 46.1
Oeu012677.3 Olea europaea HOM05D003786 ORTHO05D004375 4.9e-40 168.3 165 52.7
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 8.3e-40 167.5 189 46.6
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 8.3e-40 167.5 191 46.6
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 1.1e-39 167.2 165 51.5
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.1e-39 167.2 162 54.3
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 1.1e-39 167.2 191 46.1
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 1.1e-39 167.2 191 46.1
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 1.8e-39 166.4 187 46.0
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 1.8e-39 166.4 191 46.6
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 2.4e-39 166.0 207 45.4
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 3.2e-39 165.6 187 45.5
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 3.2e-39 165.6 198 45.5
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 4.1e-39 165.2 191 46.1
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 5.4e-39 164.9 191 46.1
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 1.2e-38 163.7 191 45.0
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 1.6e-38 163.3 189 46.0
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 1.6e-38 163.3 188 46.8
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 1.6e-38 163.3 187 46.0
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 3.5e-38 162.2 187 44.9
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 3.5e-38 162.2 191 44.0
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 3.5e-38 162.2 187 45.5
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 3.5e-38 162.2 191 42.9
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 4.6e-38 161.8 191 46.1
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 6.0e-38 161.4 191 45.0
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 7.8e-38 161.0 191 42.9
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.0e-37 160.6 191 43.5
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 1.0e-37 160.6 191 43.5
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 1.7e-37 159.8 187 43.9
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 1.7e-37 159.8 198 44.4
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 2.3e-37 159.5 187 43.3
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 5.0e-37 158.3 187 44.9
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 5.0e-37 158.3 191 42.9
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 6.6e-37 157.9 191 42.9
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 8.6e-37 157.5 187 43.9
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 8.6e-37 157.5 187 43.9
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 8.6e-37 157.5 210 41.9
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 1.9e-36 156.4 192 44.8
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 2.5e-36 156.0 199 41.7
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 3.3e-36 155.6 187 43.9
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 3.3e-36 155.6 195 45.6
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 4.3e-36 155.2 191 45.5
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 4.3e-36 155.2 192 45.3
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 4.3e-36 155.2 192 45.3
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 4.3e-36 155.2 192 45.3
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 5.6e-36 154.8 192 45.3
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 5.6e-36 154.8 191 45.0
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 5.6e-36 154.8 191 41.9
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.6e-35 153.3 191 45.5
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 2.8e-35 152.5 190 43.2
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 3.6e-35 152.1 187 42.8
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 3.6e-35 152.1 193 43.0
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 4.7e-35 151.8 191 44.0
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 6.2e-35 151.4 187 42.8
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 6.2e-35 151.4 187 42.8
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.4e-34 150.2 187 42.8
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 1.4e-34 150.2 191 45.0
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 1.8e-34 149.8 193 47.2
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 4.0e-34 148.7 190 41.1
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 4.0e-34 148.7 191 40.8
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 5.2e-34 148.3 188 41.0
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 5.2e-34 148.3 190 41.6
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 6.8e-34 147.9 193 40.9
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 8.9e-34 147.5 187 42.2
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 1.5e-33 146.7 189 41.3
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 1.5e-33 146.7 190 41.1
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 2.0e-33 146.4 193 44.6
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 2.6e-33 146.0 187 40.6
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.6e-33 146.0 128 54.7
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 3.4e-33 145.6 192 40.6
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 4.4e-33 145.2 189 40.2
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 4.4e-33 145.2 189 40.2
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 4.4e-33 145.2 190 41.6
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 4.4e-33 145.2 192 42.2
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 7.5e-33 144.4 193 42.0
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 9.8e-33 144.1 196 43.4
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 9.8e-33 144.1 195 40.5
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 9.8e-33 144.1 166 45.2
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 9.8e-33 144.1 194 42.8
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 1.7e-32 143.3 191 43.5
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.7e-32 143.3 190 39.5
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.7e-32 143.3 191 43.5
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 2.2e-32 142.9 193 42.5
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 2.2e-32 142.9 193 42.0
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.9e-32 142.5 190 40.5
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 2.9e-32 142.5 194 42.3
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 3.7e-32 142.1 194 42.3
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 3.7e-32 142.1 194 42.3
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 6.4e-32 141.4 189 40.7
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 6.4e-32 141.4 125 53.6
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 8.3e-32 141.0 189 39.2
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 8.3e-32 141.0 179 43.0
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 1.9e-31 139.8 193 41.5
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 2.4e-31 139.4 189 39.2
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 2.4e-31 139.4 189 39.2
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 2.4e-31 139.4 195 41.5
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 2.4e-31 139.4 135 47.4
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 3.2e-31 139.0 188 39.4
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.2e-31 139.0 190 39.5
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 3.2e-31 139.0 135 51.1
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 5.4e-31 138.3 171 44.4
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 5.4e-31 138.3 194 41.8
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 7.0e-31 137.9 190 39.5
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 1.6e-30 136.7 192 41.7
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.7e-29 133.3 160 42.5
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 8.6e-29 131.0 189 41.8
Migut.I00242 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.1e-28 130.6 69 89.9
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 2.5e-28 129.4 189 42.3
VMungo0563G0001 Vigna mungo HOM05D003786 ORTHO05D004375 7.3e-28 127.9 135 50.4
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 3.6e-27 125.6 188 39.9
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 3.6e-27 125.6 187 40.1
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 6.2e-27 124.8 132 46.2
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 6.2e-27 124.8 187 40.1
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 2.3e-26 122.9 191 39.3
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 5.2e-26 121.7 191 39.3
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 1.7e-24 116.7 191 36.6
Nitab4.5_0021870g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.9e-24 115.9 150 43.3
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 2.9e-24 115.9 193 36.8
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 6.4e-24 114.8 136 49.3
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 1.4e-23 113.6 191 37.7
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 4.1e-23 112.1 213 35.7
TAR623G0784 Trochodendron aralioides HOM05D003786 ORTHO05D004375 7.1e-23 111.3 161 39.8
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 1.0e-21 107.5 142 41.5
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 1.2e-19 100.5 159 37.1
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 1.8e-18 96.7 198 33.8
AT3G45577 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.5e-17 93.6 82 52.4
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.0e-17 93.2 103 49.5
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 4.4e-17 92.0 186 32.8
Pp3c27_2720 Physcomitrium patens HOM05D003786 ORTHO05D004375 4.2e-15 85.5 184 33.2
TAR376G1065 Trochodendron aralioides HOM05D000267 ORTHO05D004375 2.1e-14 83.2 106 43.4
Lj1g0020830 Lotus japonicus HOM05D003786 ORTHO05D004375 6.0e-14 81.6 92 46.7
ECA246G5003 Erigeron canadensis HOM05D003786 ORTHO05D004375 8.7e-13 77.8 119 39.5
CARHR150050 Cardamine hirsuta HOM05D003786 ORTHO05D004375 1.9e-12 76.6 116 38.8
Peaxi162Scf00389g00065 Petunia axillaris HOM05D003786 ORTHO05D004375 2.5e-12 76.3 72 50.0
Potri.014G083401 Populus trichocarpa HOM05D003786 ORTHO05D004375 9.6e-12 74.3 92 42.4
SGA_v2.0_scaffold146G36226 Striga asiatica HOM05D003786 ORTHO05D004375 1.2e-11 73.9 77 44.2
Glyma.19G143800 Glycine max HOM05D003786 ORTHO05D004375 1.1e-10 70.9 121 36.4
CBR_g44920 Chara braunii HOM05D003786 ORTHO05D004375 9.3e-07 57.8 73 41.1
Gohir.A13G220600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.2e-06 57.4 55 49.1
Lsat_1_v5_gn_2_25281 Lactuca sativa HOM05D003786 ORTHO05D004375 1.2e-06 57.4 40 65.0


User provided reference genes

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