Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.9e-144 515.8 251 100.0
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 6.8e-134 480.7 245 94.3
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.7e-124 449.5 251 88.8
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.1e-110 402.1 211 92.9
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.4e-109 398.7 209 91.9
Migut.I00236 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.1e-98 362.8 251 76.1
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 1.0e-97 360.5 245 71.8
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 1.3e-97 360.1 249 70.7
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 1.6e-90 336.7 241 66.8
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.9e-88 329.7 243 65.0
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 4.3e-88 328.6 244 64.8
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 5.6e-88 328.2 246 63.8
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 9.6e-88 327.4 246 63.8
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.3e-87 327.0 242 64.5
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.1e-87 326.2 237 65.4
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 2.8e-87 325.9 244 63.5
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 4.8e-87 325.1 243 64.2
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 1.8e-86 323.2 246 64.6
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 5.3e-86 321.6 244 66.0
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 9.0e-86 320.9 237 65.4
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 9.0e-86 320.9 243 63.4
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 1.2e-85 320.5 237 65.8
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 3.4e-85 318.9 250 62.0
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 4.5e-85 318.5 249 61.8
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 4.5e-85 318.5 237 64.6
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 4.5e-85 318.5 240 65.0
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 1.3e-84 317.0 238 60.9
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 1.7e-84 316.6 243 60.9
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 2.2e-84 316.2 243 60.1
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 4.9e-84 315.1 238 63.9
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 8.4e-84 314.3 241 63.9
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.4e-83 313.5 237 63.7
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 5.4e-83 311.6 238 62.6
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 5.4e-83 311.6 251 61.4
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 5.4e-83 311.6 251 61.4
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 1.2e-82 310.5 243 63.8
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 2.1e-82 309.7 237 62.9
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 2.1e-82 309.7 241 62.2
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 2.7e-82 309.3 237 62.4
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 3.5e-82 308.9 246 58.5
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 7.9e-82 307.8 241 59.3
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 1.8e-81 306.6 243 63.0
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 3.0e-81 305.8 243 60.1
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 3.9e-81 305.4 200 73.0
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 8.7e-81 304.3 243 62.6
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 1.5e-80 303.5 238 58.8
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 2.5e-80 302.8 237 63.3
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 2.5e-80 302.8 238 63.4
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 4.3e-80 302.0 240 58.8
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 9.6e-80 300.8 247 60.7
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 1.3e-79 300.4 239 62.8
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 2.1e-79 299.7 238 61.3
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 4.8e-79 298.5 238 58.0
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 6.2e-79 298.1 250 56.4
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 1.4e-78 297.0 239 60.7
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 6.9e-78 294.7 251 60.2
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 1.5e-77 293.5 246 56.9
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 2.0e-77 293.1 244 59.0
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 7.6e-77 291.2 247 58.7
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 1.0e-76 290.8 240 58.3
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 1.7e-76 290.0 246 58.9
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 1.7e-76 290.0 235 61.7
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 1.7e-76 290.0 244 57.4
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 4.9e-76 288.5 248 58.1
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 4.9e-76 288.5 251 59.4
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 8.4e-76 287.7 246 58.1
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 1.1e-75 287.3 246 57.3
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.1e-75 287.3 246 58.5
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.9e-75 286.6 246 58.5
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 2.5e-75 286.2 244 57.8
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 3.2e-75 285.8 246 58.5
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.2e-75 285.8 246 58.5
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 3.2e-75 285.8 250 59.2
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 5.5e-75 285.0 191 74.3
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 7.1e-75 284.6 246 58.5
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 7.1e-75 284.6 248 57.3
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 9.3e-75 284.3 240 59.6
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 2.7e-74 282.7 235 59.1
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 6.0e-74 281.6 242 58.3
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 7.9e-74 281.2 228 60.1
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 7.9e-74 281.2 244 58.2
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 2.3e-73 279.6 246 56.1
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 2.3e-73 279.6 254 55.1
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 3.9e-73 278.9 240 56.7
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 3.9e-73 278.9 240 56.7
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 5.1e-73 278.5 250 57.6
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 6.7e-73 278.1 244 57.8
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 6.7e-73 278.1 245 58.0
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 8.7e-73 277.7 245 55.5
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 3.3e-72 275.8 245 57.1
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 5.7e-72 275.0 245 55.9
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 7.4e-72 274.6 244 57.0
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 7.4e-72 274.6 242 56.6
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 9.6e-72 274.2 235 57.9
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 1.3e-71 273.9 237 59.1
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 1.6e-71 273.5 247 57.9
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 2.8e-71 272.7 250 57.2
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 3.7e-71 272.3 240 55.0
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 3.7e-71 272.3 250 56.8
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 8.2e-71 271.2 237 54.9
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 8.2e-71 271.2 252 56.0
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 8.2e-71 271.2 252 56.0
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 8.2e-71 271.2 238 54.6
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 1.1e-70 270.8 246 54.9
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 1.1e-70 270.8 244 56.6
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 1.4e-70 270.4 238 58.0
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 1.8e-70 270.0 204 62.7
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 2.4e-70 269.6 246 56.9
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 4.1e-70 268.9 247 55.5
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 5.3e-70 268.5 244 57.0
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.5e-69 266.9 240 54.6
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 2.0e-69 266.5 238 57.1
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 2.6e-69 266.2 249 55.0
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 3.4e-69 265.8 246 56.5
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 5.8e-69 265.0 238 55.9
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 5.8e-69 265.0 238 55.9
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 7.6e-69 264.6 244 54.5
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 7.6e-69 264.6 244 56.1
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 7.6e-69 264.6 246 55.3
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 7.6e-69 264.6 246 55.3
Oeu012677.3 Olea europaea HOM05D003786 ORTHO05D004375 7.6e-69 264.6 240 56.2
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 1.3e-68 263.8 248 56.5
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 1.7e-68 263.5 244 54.5
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 3.8e-68 262.3 227 59.9
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 5.0e-68 261.9 245 55.1
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 5.0e-68 261.9 246 54.5
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 1.1e-67 260.8 234 52.6
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 1.9e-67 260.0 244 54.9
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 1.9e-67 260.0 244 54.9
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 4.2e-67 258.8 240 54.2
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 5.5e-67 258.5 240 55.4
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 2.1e-66 256.5 244 55.3
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 2.7e-66 256.1 244 54.5
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 7.9e-66 254.6 235 53.2
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.0e-65 254.2 240 54.6
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.0e-65 254.2 240 55.0
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 6.7e-65 251.5 235 52.3
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 1.5e-64 250.4 240 54.2
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 1.5e-64 250.4 200 60.0
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 2.4e-62 243.0 237 54.0
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 7.7e-61 238.0 247 53.0
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 1.7e-60 236.9 214 54.2
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 1.1e-59 234.2 237 54.4
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 1.9e-59 233.4 239 51.9
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 2.3e-57 226.5 243 51.9
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 5.1e-57 225.3 259 48.3
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 8.8e-57 224.6 195 55.4
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.5e-56 223.0 162 65.4
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 9.7e-56 221.1 244 50.4
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 3.7e-55 219.2 238 48.7
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 6.3e-55 218.4 250 48.0
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 2.4e-54 216.5 226 50.0
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 1.5e-53 213.8 240 47.1
Nitab4.5_0021870g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 2.2e-52 209.9 159 62.3
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 6.5e-52 208.4 157 61.1
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 7.2e-51 204.9 162 61.1
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 3.6e-50 202.6 200 54.5
Migut.I00242 Erythranthe guttata HOM05D003786 ORTHO05D004375 4.7e-50 202.2 107 94.4
TAR623G0784 Trochodendron aralioides HOM05D003786 ORTHO05D004375 6.1e-50 201.8 174 54.6
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 2.0e-48 196.8 185 55.7
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 5.3e-46 188.7 270 41.1
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 1.6e-45 187.2 258 42.6
VMungo0563G0001 Vigna mungo HOM05D003786 ORTHO05D004375 7.2e-43 178.3 208 47.6
Pp3c27_2720 Physcomitrium patens HOM05D003786 ORTHO05D004375 4.7e-42 175.6 270 39.6
ECA246G5003 Erigeron canadensis HOM05D003786 ORTHO05D004375 2.5e-35 153.3 135 54.8
Potri.014G083401 Populus trichocarpa HOM05D003786 ORTHO05D004375 3.4e-32 142.9 95 70.5
CARHR150050 Cardamine hirsuta HOM05D003786 ORTHO05D004375 4.5e-29 132.5 122 54.9
Glyma.19G143800 Glycine max HOM05D003786 ORTHO05D004375 2.9e-28 129.8 120 53.3
Lj1g0020830 Lotus japonicus HOM05D003786 ORTHO05D004375 8.5e-28 128.3 136 50.0
Peaxi162Scf00389g00065 Petunia axillaris HOM05D003786 ORTHO05D004375 6.1e-26 122.1 118 53.4
TAR376G1065 Trochodendron aralioides HOM05D000267 ORTHO05D004375 2.4e-22 110.2 158 39.9
SGA_v2.0_scaffold146G36226 Striga asiatica HOM05D003786 ORTHO05D004375 7.0e-22 108.6 88 54.5
Gohir.A13G220600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 2.0e-21 107.1 93 57.0
CBR_g44920 Chara braunii HOM05D003786 ORTHO05D004375 4.5e-21 105.9 166 38.0
Lsat_1_v5_gn_2_25281 Lactuca sativa HOM05D003786 ORTHO05D004375 4.3e-19 99.4 74 63.5
BcaC04g19667 Brassica carinata HOM05D000666 ORTHO05D001727 1.2e-16 91.3 85 57.6
AT3G45577 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.5e-16 90.9 96 51.0
CARHR273910 Cardamine hirsuta HOM05D003786 ORTHO05D004375 9.2e-14 81.6 80 55.0
Medtr5g031400 Medicago truncatula HOM05D003786 ORTHO05D004375 1.5e-11 74.3 136 35.3
MCO01G070 Micromonas commoda HOM05D003786 ORTHO05D004375 2.5e-11 73.6 266 24.4
PRCOL_00003701 Prasinoderma coloniale HOM05D003786 ORTHO05D004375 7.3e-11 72.0 163 27.6
RcHm_v2.0_Chr5g0025331 Rosa chinensis HOM05D003786 ORTHO05D004375 3.6e-10 69.7 54 61.1


User provided reference genes

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