Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.0e-94 350.1 181 100.0
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 1.6e-60 236.5 305 50.5
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 3.6e-60 235.3 303 51.8
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.0e-59 233.8 303 51.5
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 3.0e-59 232.3 310 49.7
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.2e-59 231.5 303 51.2
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.2e-59 231.5 303 51.2
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.2e-59 231.5 303 51.2
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.2e-59 231.5 303 51.2
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 1.5e-58 229.9 303 50.2
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.6e-58 229.2 303 50.8
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 3.3e-58 228.8 226 61.1
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 9.7e-58 227.3 240 57.9
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 9.7e-58 227.3 303 49.5
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 1.3e-57 226.9 303 51.2
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.3e-57 226.9 233 59.2
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.7e-57 226.5 305 50.2
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.7e-57 226.5 233 58.8
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.8e-57 225.7 233 59.2
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 2.8e-57 225.7 233 58.8
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.8e-57 225.7 233 59.2
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 2.8e-57 225.7 233 58.4
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 3.7e-57 225.3 303 48.2
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-56 223.4 233 58.8
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 5.3e-56 221.5 233 57.5
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.3e-56 221.5 233 57.5
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.3e-56 221.5 233 57.5
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.3e-56 221.5 233 57.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.0e-55 219.5 233 57.1
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.0e-55 219.5 240 56.2
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-55 219.5 240 56.2
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 4.5e-55 218.4 240 55.8
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.3e-54 216.9 233 56.7
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 8.5e-54 214.2 233 55.8
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 4.2e-53 211.8 233 55.8
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 5.5e-53 211.5 233 55.8
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 7.2e-53 211.1 239 54.8
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 240 53.8
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 240 53.8
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-52 209.5 251 52.6
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 3.6e-52 208.8 233 55.4
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.1e-52 208.0 249 52.2
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 8.0e-52 207.6 224 57.1
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 8.0e-52 207.6 223 57.0
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-51 207.2 233 54.9
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.8e-51 206.5 240 52.9
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 6.8e-51 204.5 233 52.4
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 6.8e-51 204.5 233 52.4
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 6.8e-51 204.5 233 52.4
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 6.8e-51 204.5 233 52.4
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 6.8e-51 204.5 233 52.4
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.2e-50 203.8 238 52.5
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 5.7e-50 201.4 244 52.5
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 7.5e-50 201.1 233 52.8
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 6.3e-49 198.0 274 48.5
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 1.2e-47 193.7 218 54.6
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 2.7e-47 192.6 175 63.4
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.0e-46 190.7 218 53.7
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.0e-46 190.7 175 62.3
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.8e-46 188.7 174 62.6
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 5.0e-46 188.3 152 69.1
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.6e-46 187.6 220 53.2
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 5.5e-45 184.9 175 61.7
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 5.5e-45 184.9 145 71.0
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.1e-44 183.0 310 43.2
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 2.8e-44 182.6 222 52.7
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 1.8e-43 179.9 215 51.2
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.3e-43 179.5 160 63.8
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 4.0e-43 178.7 146 66.4
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 6.8e-43 177.9 175 58.3
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 2.8e-41 172.6 136 70.6
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.9e-41 171.8 160 61.2
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.1e-40 169.1 149 63.1
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 4.5e-39 165.2 191 53.9
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 2.5e-37 159.5 128 69.5
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 5.6e-37 158.3 157 58.0
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-36 156.4 157 58.0
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.8e-36 156.0 157 58.0
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 3.6e-36 155.6 134 64.9
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 6.1e-36 154.8 87 89.7
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 3.1e-35 152.5 148 62.2
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 8.9e-35 151.0 182 52.7
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 2.0e-34 149.8 221 45.2
Glyma.02G221400 Glycine max HOM05D000216 ORTHO05D000634 2.6e-34 149.4 138 59.4
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-32 144.1 281 40.2
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.0e-32 141.4 131 59.5
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.7e-30 136.7 310 36.8
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.0e-30 135.2 145 57.2
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 1.1e-29 134.0 156 51.9
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.5e-29 133.7 203 46.3
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 5.6e-29 131.7 187 46.5
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 9.5e-29 131.0 120 62.5
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.6e-28 130.2 112 63.4
Gorai.011G135800 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.8e-28 129.4 105 67.6
EL10Ac3g05558 Beta vulgaris HOM05D000216 ORTHO05D000634 6.2e-28 128.3 128 58.6
Lsat_1_v5_gn_3_118000 Lactuca sativa HOM05D000216 ORTHO05D000634 6.8e-27 124.8 109 64.2
AUR62041877 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.5e-26 123.6 67 91.0
Gohir.D03G089666 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.2e-25 119.8 117 58.1
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 3.7e-25 119.0 63 93.7
HanXRQChr00c0988g0578131 Helianthus annuus HOM05D000216 ORTHO05D000634 6.4e-25 118.2 102 64.7
Gohir.D10G123250 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.3e-22 110.5 99 61.6
Gorai.003G071700 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.3e-22 110.5 109 56.9
Lj1g0027665 Lotus japonicus HOM05D000216 ORTHO05D000634 9.5e-21 104.4 114 53.5
Gohir.D01G206650 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.1e-20 103.2 115 58.3
Migut.D01414 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.0e-19 99.0 50 100.0
CAN.G511.9 Capsicum annuum HOM05D000216 ORTHO05D000634 8.9e-19 97.8 92 63.0
Hund04025 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.5e-18 94.7 122 48.4
HanXRQChr14g0454991 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-17 94.0 205 37.6
Oeu010681.1 Olea europaea HOM05D000216 ORTHO05D000634 1.7e-17 93.6 97 57.7
Solyc07g021290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-17 93.6 55 81.8
Nitab4.5_0016036g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.2e-17 93.2 188 41.0
Pp3c7_4990 Physcomitrium patens HOM05D000216 ORTHO05D000634 3.7e-17 92.4 145 37.9
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 4.1e-16 89.0 85 63.5
Atru.chr6.1615 Acer truncatum HOM05D000216 ORTHO05D000634 9.2e-16 87.8 90 56.7
MELO3C001268.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.7e-14 83.6 115 47.8
MELO3C028015.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.7e-14 83.6 115 47.8
SEGI_15522 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.3e-14 83.2 87 52.9
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.5e-13 80.5 87 56.3
Solyc12g062650.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.3e-13 79.3 69 62.3
MELO3C028016.2 Cucumis melo HOM05D000216 ORTHO05D000634 4.3e-13 79.0 115 46.1
HPP92_016025 Vanilla planifolia HOM05D000216 ORTHO05D000634 2.8e-12 76.3 49 73.5
Migut.K00966 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.4e-11 73.9 74 62.2
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 2.4e-11 73.2 236 27.1
Nn092s42879 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.6e-10 69.7 102 45.1
TPR.G26480 Trifolium pratense HOM05D000216 ORTHO05D000634 4.4e-10 68.9 79 50.6
SGA_v2.0_scaffold69G23193 Striga asiatica HOM05D000216 ORTHO05D000634 1.3e-09 67.4 57 63.2
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.2e-09 66.6 85 50.6
HanXRQChr00c0823g0577631 Helianthus annuus HOM05D000216 ORTHO05D000634 3.8e-09 65.9 37 86.5
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-08 64.3 85 49.4
HanXRQChr07g0188321 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-08 64.3 75 53.3
Nn3g18459 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.4e-08 63.9 48 70.8
Lalb_Chr13g0292901 Lupinus albus HOM05D000216 ORTHO05D000634 2.4e-08 63.2 78 48.7
CSS0009554 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 3.2e-08 62.8 32 93.8
CAN.G939.12 Capsicum annuum HOM05D000216 ORTHO05D000634 3.2e-08 62.8 32 93.8
HPP92_007917 Vanilla planifolia HOM05D000216 ORTHO05D000634 3.2e-08 62.8 32 93.8
Gohir.A09G103316 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.2e-08 62.4 43 76.7
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 4.2e-08 62.4 33 90.9
Hma1.2p1_3151F.1_g333240 Hydrangea macrophylla HOM05D000175 ORTHO05D000481 7.1e-08 61.6 34 85.3
Nitab4.5_0004184g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.3e-08 61.2 62 54.8
CAN.G100.42 Capsicum annuum HOM05D000216 ORTHO05D000634 1.2e-07 60.8 106 41.5
HanXRQChr00c0125g0571741 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-07 60.1 32 90.6
HanXRQChr07g0188311 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-07 60.1 32 90.6
HanXRQChr10g0282521 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-07 60.1 32 90.6
Lsat_1_v5_gn_3_118020 Lactuca sativa HOM05D000216 ORTHO05D000634 2.1e-07 60.1 32 90.6
SEGI_00070 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.7e-07 59.7 32 84.4
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.7e-07 59.7 32 84.4
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.7e-07 59.7 32 84.4
SEGI_05928 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 2.7e-07 59.7 32 84.4
SEGI_07796 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.7e-07 59.7 32 84.4
SEGI_17366 Sequoiadendron giganteum HOM05D000216 ORTHO05D004227 2.7e-07 59.7 32 84.4
SEGI_21477 Sequoiadendron giganteum HOM05D000216 ORTHO05D004227 2.7e-07 59.7 32 84.4
SEGI_22490 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.7e-07 59.7 32 84.4
SEGI_22758 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.7e-07 59.7 32 84.4
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.7e-07 59.7 32 84.4
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.7e-07 59.7 32 84.4
SEGI_35543 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.7e-07 59.7 32 84.4
SEGI_38828 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.7e-07 59.7 32 84.4
SEGI_39307 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.7e-07 59.7 32 84.4
MELO3C032363.2 Cucumis melo HOM05D000216 ORTHO05D000634 3.5e-07 59.3 32 87.5
SEGI_24942 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.5e-07 59.3 30 90.0
CAN.G219.16 Capsicum annuum HOM05D000743 ORTHO05D000580 4.6e-07 58.9 32 87.5
Lalb_Chr06g0173101 Lupinus albus HOM05D000216 ORTHO05D000634 4.6e-07 58.9 84 46.4
SGA_v2.0_scaffold61G21222 Striga asiatica HOM05D000540 ORTHO05D000681 7.8e-07 58.2 32 87.5
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 1.0e-06 57.8 75 42.7
SEGI_03649 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.0e-06 57.8 30 86.7
SEGI_23567 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.0e-06 57.8 32 81.2
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.0e-06 57.8 73 52.1
PGSC0003DMG400020297 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.0e-06 57.8 32 84.4
SEGI_02904 Sequoiadendron giganteum HOM05D000743 ORTHO05D000580 1.3e-06 57.4 32 81.2
QL08p049862 Quercus lobata HOM05D000216 ORTHO05D000634 1.7e-06 57.0 29 93.1
SEGI_21589 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 2.3e-06 56.6 32 81.2
HanXRQChr11g0322741 Helianthus annuus HOM05D000216 ORTHO05D000634 3.9e-06 55.8 29 93.1
SEGI_01764 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.9e-06 55.8 31 80.6
Solyc08g028900.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.1e-06 55.5 32 84.4


User provided reference genes

Program Settings