Gene: Pp3c7_4990
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c7_4990
- Transcript Identifier Pp3c7_4990V3.1
- Gene Type Coding gene
- Location Chr07 : 3189124-3189750 : positive
Gene Family Information
- ID HOM05D000216
- #Genes/#Species 1874/88
- Phylogenetic origin
- ID ORTHO05D000634
- #Genes/#Species 723/78
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c7_4990V3.1
- pacid 32926006
- uniprot A0A7I3Z5P1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | GOA Database | transcription, DNA-templated | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0006354 | ISO | PLAZA Integrative Orthology | DNA-templated transcription, elongation | ATCG00170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG00170 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00170 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | ATCG00170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007081 | RNA polymerase Rpb1, domain 5 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |