Gene: Lsat_1_v5_gn_1_6760

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_6760
  • Transcript Identifier Lsat_1_v5_gn_1_6760.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 9953697-9970338 : negative

Gene Family Information

  • ID HOM05D003214
  • #Genes/#Species 213/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_6760.v5
  • pacid 38947232

Descriptions

  • Description K18752 - transportin-1 (TNPO1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0006606
IEA
InterProprotein import into nucleus
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0051170
ISO
PLAZA Integrative Orthologyimport into nucleus AT2G16950
GO:0035280
ISO
PLAZA Integrative OrthologymiRNA loading onto RISC involved in gene silencing by miRNA AT2G16950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031267
IEA
InterProsmall GTPase binding
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G16950
GO:0140142
ISO
PLAZA Integrative Orthologynucleocytoplasmic carrier activity AT2G16950

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G16950
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G16950
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G16950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001494 Importin-beta, N-terminal domain
IPR040122 Importin beta family
IPR011989 Armadillo-like helical
IPR007081 RNA polymerase Rpb1, domain 5
IPR016024 Armadillo-type fold
Mapman id Description
15.6.1.2.1.4 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC2
23.5.1.2.3 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB2)