Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00202 Erythranthe guttata HOM05D004370 ORTHO05D005084 3.7e-101 372.1 272 100.0
Oeu031694.1 Olea europaea HOM05D004370 ORTHO05D005084 3.8e-74 282.3 277 67.1
Migut.E01529 Erythranthe guttata HOM05D004370 ORTHO05D005084 7.2e-73 278.1 265 74.0
MSTRG.1661 Avicennia marina HOM05D004370 ORTHO05D005084 1.4e-71 273.9 260 78.1
SalBow1G7578 Salvia bowleyana HOM05D004370 ORTHO05D005084 4.4e-70 268.9 142 95.1
Oeu043883.1 Olea europaea HOM05D004370 ORTHO05D005084 6.3e-69 265.0 286 69.2
Solyc01g094540.4 Solanum lycopersicum HOM05D004370 ORTHO05D005084 5.4e-68 261.9 143 93.0
Solyc05g049950.3 Solanum lycopersicum HOM05D004370 ORTHO05D005084 1.6e-67 260.4 144 90.3
Sopen01g038350 Solanum pennellii HOM05D004370 ORTHO05D005084 1.6e-67 260.4 143 92.3
Sopen05g028310 Solanum pennellii HOM05D004370 ORTHO05D005084 1.6e-67 260.4 144 90.3
PGSC0003DMG400021647 Solanum tuberosum HOM05D004370 ORTHO05D005084 1.6e-67 260.4 144 90.3
SGA_v2.0_scaffold169G38655 Striga asiatica HOM05D004370 ORTHO05D005084 7.7e-67 258.1 263 69.6
SGA_v2.0_scaffold163G38072 Striga asiatica HOM05D004370 ORTHO05D005084 1.0e-66 257.7 247 71.3
CAN.G78.61 Capsicum annuum HOM05D004370 ORTHO05D005084 1.3e-66 257.3 244 64.3
PGSC0003DMG400000167 Solanum tuberosum HOM05D004370 ORTHO05D005084 1.7e-66 256.9 143 90.2
unitig_899.g14482 Utricularia gibba HOM05D004370 ORTHO05D005084 9.5e-65 251.1 140 90.0
Manes.06G060100 Manihot esculenta HOM05D004370 ORTHO05D005084 1.6e-64 250.4 144 87.5
Manes.14G127000 Manihot esculenta HOM05D004370 ORTHO05D005084 6.1e-64 248.4 144 86.1
Aa31LG9G8700 Aethionema arabicum HOM05D004370 ORTHO05D005084 1.0e-63 247.7 144 88.2
AL7G33430 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 1.0e-63 247.7 144 88.2
AT4G20440 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 1.0e-63 247.7 144 88.2
Thhalv10026002m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 1.0e-63 247.7 144 88.2
Sp7g18800 Schrenkiella parvula HOM05D004370 ORTHO05D005084 1.0e-63 247.7 144 88.2
CARHR227270 Cardamine hirsuta HOM05D004370 ORTHO05D005084 1.4e-63 247.3 144 87.5
Carub.0007s2072 Capsella rubella HOM05D004370 ORTHO05D005084 3.0e-63 246.1 144 87.5
TWI15G0591 Tripterygium wilfordii HOM05D004370 ORTHO05D005084 3.0e-63 246.1 144 86.1
Aqoxy1G00534 Aquilegia oxysepala HOM05D004370 ORTHO05D005084 5.2e-63 245.4 143 85.3
AL8G15320 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 5.2e-63 245.4 145 86.2
AT5G44500 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 5.2e-63 245.4 145 86.2
Aa31LG6G2820 Aethionema arabicum HOM05D004370 ORTHO05D005084 8.9e-63 244.6 144 87.5
Nn1g09322 Nelumbo nucifera HOM05D004370 ORTHO05D005084 1.2e-62 244.2 143 85.3
Cfa008716 Carpinus fangiana HOM05D004370 ORTHO05D005084 2.0e-62 243.4 145 85.5
Haze_11726 Corylus avellana HOM05D004370 ORTHO05D005084 2.0e-62 243.4 145 85.5
Atru.chr10.664 Acer truncatum HOM05D004370 ORTHO05D005084 2.6e-62 243.0 145 85.5
BcaC09g51319 Brassica carinata HOM05D004370 ORTHO05D005084 2.6e-62 243.0 144 84.7
BcaNung04159 Brassica carinata HOM05D004370 ORTHO05D005084 2.6e-62 243.0 144 85.4
C01p14450 Brassica napus HOM05D004370 ORTHO05D005084 2.6e-62 243.0 144 84.7
BolC1t01401H Brassica oleracea HOM05D004370 ORTHO05D005084 2.6e-62 243.0 144 84.7
CiPaw.13G141500 Carya illinoinensis HOM05D004370 ORTHO05D005084 2.6e-62 243.0 142 84.5
Ciclev10018122m.g Citrus clementina HOM05D004370 ORTHO05D005084 2.6e-62 243.0 146 84.9
BcaB03g11674 Brassica carinata HOM05D004370 ORTHO05D005084 3.4e-62 242.7 144 85.4
A08p14890 Brassica napus HOM05D004370 ORTHO05D005084 3.4e-62 242.7 144 85.4
A01p12130 Brassica napus HOM05D004370 ORTHO05D005084 4.4e-62 242.3 144 84.7
BraA01t01156Z Brassica rapa HOM05D004370 ORTHO05D005084 4.4e-62 242.3 144 84.7
Lj5C81T13 Lonicera japonica HOM05D004370 ORTHO05D005084 4.4e-62 242.3 143 85.3
Peaxi162Scf00020g00025 Petunia axillaris HOM05D004370 ORTHO05D005084 4.4e-62 242.3 135 90.4
Sc10g0006890 Simmondsia chinensis HOM05D004370 ORTHO05D005084 4.4e-62 242.3 142 83.8
Dinv04119 Davidia involucrata HOM05D004370 ORTHO05D005084 5.7e-62 241.9 143 85.3
BcaNung05680 Brassica carinata HOM05D004370 ORTHO05D005084 7.5e-62 241.5 145 86.9
Cpa.g.sc285.3 Carica papaya HOM05D004370 ORTHO05D005084 7.5e-62 241.5 144 84.0
SHI20646 Sapria himalayana HOM05D004370 ORTHO05D005084 7.5e-62 241.5 245 57.1
CDE10G0801 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 9.8e-62 241.1 143 83.2
Lj9P663T35 Lonicera japonica HOM05D004370 ORTHO05D005084 9.8e-62 241.1 143 86.0
BcaC01g00671 Brassica carinata HOM05D004370 ORTHO05D005084 1.3e-61 240.7 144 84.7
C03p82950 Brassica napus HOM05D004370 ORTHO05D005084 1.3e-61 240.7 144 84.7
CANSAT25G2913 Cannabis sativa HOM05D004370 ORTHO05D005084 1.3e-61 240.7 144 85.4
Carub.0008s0400 Capsella rubella HOM05D004370 ORTHO05D005084 1.7e-61 240.4 145 85.5
CDE10G0749 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 1.7e-61 240.4 143 82.5
AUR62000301 Chenopodium quinoa HOM05D004370 ORTHO05D005084 1.7e-61 240.4 149 81.2
AUR62009174 Chenopodium quinoa HOM05D004370 ORTHO05D005084 1.7e-61 240.4 149 81.2
HanXRQChr08g0218671 Helianthus annuus HOM05D004370 ORTHO05D005084 2.2e-61 240.0 144 81.9
HanXRQChr10g0304281 Helianthus annuus HOM05D004370 ORTHO05D005084 2.2e-61 240.0 144 81.9
Prupe.6G342400 Prunus persica HOM05D004370 ORTHO05D005084 2.2e-61 240.0 143 83.9
BolC3t20578H Brassica oleracea HOM05D004370 ORTHO05D005084 2.9e-61 239.6 144 84.0
MBI05_g12101_MAGBIO Magnolia biondii HOM05D004370 ORTHO05D005084 3.7e-61 239.2 144 82.6
Prupe.5G168200 Prunus persica HOM05D004370 ORTHO05D005084 3.7e-61 239.2 144 84.0
Lsat_1_v5_gn_2_112821 Lactuca sativa HOM05D004370 ORTHO05D005084 4.9e-61 238.8 144 81.9
MD14G1174700 Malus domestica HOM05D004370 ORTHO05D005084 4.9e-61 238.8 144 83.3
arahy.Tifrunner.gnm1.ann1.B8WTIA Arachis hypogaea HOM05D004370 ORTHO05D005084 6.4e-61 238.4 146 82.2
arahy.Tifrunner.gnm1.ann1.TBHV4Q Arachis hypogaea HOM05D004370 ORTHO05D005084 6.4e-61 238.4 146 82.2
Hma1.2p1_0892F.1_g233360 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 6.4e-61 238.4 144 84.7
Lsat_1_v5_gn_8_20501 Lactuca sativa HOM05D004370 ORTHO05D005084 6.4e-61 238.4 144 81.2
Ca_06302_v3 Cicer arietinum L. HOM05D004370 ORTHO05D005084 8.3e-61 238.0 145 83.4
CsaV3_6G052680 Cucumis sativus L. HOM05D004370 ORTHO05D005084 8.3e-61 238.0 144 83.3
Potri.011G155700 Populus trichocarpa HOM05D004370 ORTHO05D005084 8.3e-61 238.0 144 84.0
Sed0027177 Sechium edule HOM05D004370 ORTHO05D005084 8.3e-61 238.0 144 83.3
Duzib160G0857 Durio zibethinus HOM05D004370 ORTHO05D005084 1.1e-60 237.7 268 55.6
ECA238G0265 Erigeron canadensis HOM05D004370 ORTHO05D005084 1.4e-60 237.3 303 57.8
CSS0027232 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 1.8e-60 236.9 145 84.1
ClCG01G025430 Citrullus lanatus HOM05D004370 ORTHO05D005084 1.8e-60 236.9 260 62.7
MELO3C007041.2 Cucumis melo HOM05D004370 ORTHO05D005084 1.8e-60 236.9 260 62.3
MD06G1169400 Malus domestica HOM05D004370 ORTHO05D005084 1.8e-60 236.9 144 82.6
THA.LOC104806243 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 1.8e-60 236.9 144 83.3
VMungo0647G0361 Vigna mungo HOM05D004370 ORTHO05D005084 1.8e-60 236.9 146 82.2
Hma1.2p1_0258F.1_g104020 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 2.4e-60 236.5 144 84.0
Lalb_Chr10g0106891 Lupinus albus HOM05D004370 ORTHO05D005084 2.4e-60 236.5 144 81.9
Phvul.008G264900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 2.4e-60 236.5 146 82.2
Psat2g015400 Pisum sativum HOM05D004370 ORTHO05D005084 2.4e-60 236.5 145 82.8
PGR142G3562 Punica granatum HOM05D004370 ORTHO05D005084 2.4e-60 236.5 252 70.2
Rhsim07G0192400 Rhododendron simsii HOM05D004370 ORTHO05D005084 2.4e-60 236.5 144 84.0
Rhsim07G0192600 Rhododendron simsii HOM05D004370 ORTHO05D005084 2.4e-60 236.5 144 84.0
Sed0020090 Sechium edule HOM05D004370 ORTHO05D005084 2.4e-60 236.5 144 83.3
TPR.G12528 Trifolium pratense HOM05D004370 ORTHO05D005084 2.4e-60 236.5 145 82.1
Lalb_Chr04g0248641 Lupinus albus HOM05D004370 ORTHO05D005084 3.2e-60 236.1 144 81.9
Thecc.06G007600 Theobroma cacao HOM05D004370 ORTHO05D005084 3.2e-60 236.1 147 82.3
LjContig00310g0017486 Lotus japonicus HOM05D004370 ORTHO05D005084 4.1e-60 235.7 145 81.4
TAR633G2348 Trochodendron aralioides HOM05D004370 ORTHO05D005084 4.1e-60 235.7 242 64.9
unitig_736.g22531 Utricularia gibba HOM05D004370 ORTHO05D005084 4.1e-60 235.7 134 87.3
Glyma.02G288900 Glycine max HOM05D004370 ORTHO05D005084 5.4e-60 235.3 146 81.5
Glyma.14G025900 Glycine max HOM05D004370 ORTHO05D005084 1.2e-59 234.2 146 80.8
Gohir.D10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 1.2e-59 234.2 272 54.0
QL03p043504 Quercus lobata HOM05D004370 ORTHO05D005084 1.2e-59 234.2 146 82.2
COL.COLO4_26893 Corchorus olitorius HOM05D004370 ORTHO05D005084 2.0e-59 233.4 147 81.6
Thhalv10001000m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 2.0e-59 233.4 145 81.4
CSS0048817 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 2.7e-59 233.0 145 83.4
Medtr5g092010 Medicago truncatula HOM05D004370 ORTHO05D005084 3.5e-59 232.6 145 80.7
RcHm_v2.0_Chr3g0451231 Rosa chinensis HOM05D004370 ORTHO05D005084 3.5e-59 232.6 150 79.3
FAN04G0169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 4.6e-59 232.3 252 64.7
Ah.16g102810 Amaranthus hybridus HOM05D004370 ORTHO05D005084 5.9e-59 231.9 146 80.1
Potri.001G440100 Populus trichocarpa HOM05D004370 ORTHO05D005084 5.9e-59 231.9 144 82.6
BraA08t33472Z Brassica rapa HOM05D000106 ORTHO05D005084 7.8e-59 231.5 138 84.1
Gohir.A10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 7.8e-59 231.5 258 57.4
Phvul.008G234900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 1.3e-58 230.7 146 80.8
QL06p021586 Quercus lobata HOM05D004370 ORTHO05D005084 1.7e-58 230.3 251 62.9
Gorai.011G006200 Gossypium raimondii HOM05D004370 ORTHO05D005084 3.0e-58 229.6 258 57.4
Cc09_g05790 Coffea canephora HOM05D004370 ORTHO05D005084 3.9e-58 229.2 145 82.8
FAN13G1169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 5.0e-58 228.8 144 81.2
FvH4_5g05920 Fragaria vesca HOM05D004370 ORTHO05D005084 1.5e-57 227.3 252 63.9
FAN18G1507 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.5e-57 227.3 252 63.9
Ah.10g036820 Amaranthus hybridus HOM05D004370 ORTHO05D005084 1.9e-57 226.9 149 75.8
FAN08G0371 Fragaria x ananassa HOM05D004370 ORTHO05D005084 3.3e-57 226.1 250 62.8
RcHm_v2.0_Chr7g0192911 Rosa chinensis HOM05D004370 ORTHO05D005084 5.6e-57 225.3 144 80.6
DCAR_006631 Daucus carota HOM05D004370 ORTHO05D005084 7.3e-57 224.9 145 79.3
Medtr8g080090 Medicago truncatula HOM05D004370 ORTHO05D005084 7.3e-57 224.9 146 78.8
THA.LOC104812077 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 4.7e-56 222.2 144 80.6
FAN13G1413 Fragaria x ananassa HOM05D004370 ORTHO05D005084 8.0e-56 221.5 140 80.0
Sabra16G0297300 Salix brachista HOM05D004370 ORTHO05D005084 8.0e-56 221.5 144 79.2
HPP92_018640 Vanilla planifolia HOM05D004370 ORTHO05D005084 8.0e-56 221.5 149 77.2
Actinidia35547 Actinidia chinensis HOM05D004370 ORTHO05D005084 1.8e-55 220.3 239 56.5
ATR0697G198 Amborella trichopoda HOM05D004370 ORTHO05D005084 1.2e-54 217.6 144 77.8
Mapoly0023s0062 Marchantia polymorpha HOM05D004370 ORTHO05D005084 6.4e-53 211.8 143 76.9
Sabra11G0144100 Salix brachista HOM05D004370 ORTHO05D005084 4.1e-52 209.1 128 82.0
Eucgr.L00005 Eucalyptus grandis HOM05D004370 ORTHO05D005084 2.0e-51 206.8 282 59.6
CBR_g48393 Chara braunii HOM05D004370 ORTHO05D005084 8.6e-50 201.4 142 72.5
Zm00001eb117150 Zea mays HOM05D004370 ORTHO05D005084 1.5e-49 200.7 145 73.1
Cre14.g611150 Chlamydomonas reinhardtii HOM05D004370 ORTHO05D005084 1.7e-45 187.2 143 67.8
C07p50900 Brassica napus HOM05D000106 ORTHO05D000160 3.7e-45 186.0 119 81.5
AUR62022051 Chenopodium quinoa HOM05D004370 ORTHO05D005084 1.1e-44 184.5 150 66.7
SEGI_35791 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 1.0e-42 177.9 144 67.4
Lsat_1_v5_gn_8_16800 Lactuca sativa HOM05D004370 ORTHO05D005084 1.3e-42 177.6 113 77.9
BcaNung05058 Brassica carinata HOM05D004370 ORTHO05D005084 3.0e-42 176.4 114 80.7
A03p52450 Brassica napus HOM05D004370 ORTHO05D005084 8.6e-42 174.9 114 79.8
PSO339G5217 Papaver somniferum HOM05D004370 ORTHO05D005084 3.3e-41 172.9 304 48.4
PSO384G4426 Papaver somniferum HOM05D004370 ORTHO05D005084 3.3e-41 172.9 304 48.4
MCO12G128 Micromonas commoda HOM05D004370 ORTHO05D005084 4.7e-40 169.1 143 61.5
arahy.Tifrunner.gnm1.ann1.IZ2YN8 Arachis hypogaea HOM05D004370 ORTHO05D005084 6.2e-40 168.7 109 77.1
MD04G1223300 Malus domestica HOM05D004370 ORTHO05D005084 1.4e-39 167.5 123 69.9
Zm00001eb300870 Zea mays HOM05D004370 ORTHO05D005084 2.4e-36 156.8 145 60.0
SMO367G1222 Selaginella moellendorffii HOM05D004370 ORTHO05D005084 1.0e-34 151.4 94 79.8
Dinv23904 Davidia involucrata HOM05D004370 ORTHO05D005084 1.3e-34 151.0 143 60.8
MD04G1002600 Malus domestica HOM05D004370 ORTHO05D005084 1.4e-31 141.0 103 70.9
arahy.Tifrunner.gnm1.ann1.1VG4JJ Arachis hypogaea HOM05D004370 ORTHO05D005084 2.4e-31 140.2 94 74.5
PRCOL_00001809 Prasinoderma coloniale HOM05D004370 ORTHO05D005084 2.6e-30 136.7 106 65.1
Pp3c3_24850 Physcomitrium patens HOM05D004370 ORTHO05D005084 7.6e-30 135.2 142 51.4
Pp3c3_24900 Physcomitrium patens HOM05D004370 ORTHO05D005084 7.6e-30 135.2 142 51.4
Pp3c3_24910 Physcomitrium patens HOM05D004370 ORTHO05D005084 7.6e-30 135.2 142 51.4
Pp3c10_22940 Physcomitrium patens HOM05D004370 ORTHO05D005084 6.4e-29 132.1 142 50.7
AUR62009175 Chenopodium quinoa HOM05D004370 ORTHO05D005084 2.4e-23 113.6 144 50.7
Oeu011279.1 Olea europaea HOM05D004370 ORTHO05D005084 6.0e-19 99.0 53 90.6
GSVIVG01034611001 Vitis vinifera HOM05D004370 ORTHO05D005084 7.6e-14 82.0 69 65.2
SEGI_08107 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 1.7e-13 80.9 52 71.2
BraA03t14323Z Brassica rapa HOM05D004370 ORTHO05D005084 7.4e-09 65.5 36 86.1
BcaNung05387 Brassica carinata HOM05D004370 ORTHO05D005084 9.6e-09 65.1 37 83.8


User provided reference genes

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