Gene: HPP92_018640

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_018640
  • Transcript Identifier Vpl09Ag18640.1
  • Gene Type Coding gene
  • Location CM028158.1 : 21673802-21674662 : negative

Gene Family Information

  • ID HOM05D004370
  • #Genes/#Species 164/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl09Ag18640.1
  • pid KAG0467060.1

Descriptions

  • Description Small nuclear ribonucleoprotein family protein *-*
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT4G20440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT4G20440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G20440
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G44500
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT4G20440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001163 LSM domain, eukaryotic/archaea-type
IPR017131 Small ribonucleoprotein associated, SmB/SmN
IPR010920 LSM domain superfamily
Mapman id Description
16.2.2.1 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-B