Gene: BraA08t33472Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA08t33472Z
- Transcript Identifier BraA08t33472Z
- Gene Type Coding gene
- Location A08 : 14197202-14212094 : negative
Gene Family Information
- ID HOM05D000106
- #Genes/#Species 3090/97
- Phylogenetic origin
- ID ORTHO05D005084
- #Genes/#Species 164/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- uniprot A0A3P6BE29
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006468 | IEA | GOA Database | protein phosphorylation | |
| GO:0006468 | IEA | InterPro | protein phosphorylation | |
| GO:0000398 | ISO | PLAZA Integrative Orthology | mRNA splicing, via spliceosome | AT4G20440 |
| GO:0016310 | IEA | GOA Database | phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004672 | IEA | GOA Database | protein kinase activity | |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016301 | IEA | GOA Database | kinase activity | |
| GO:0004674 | IEA | GOA Database | protein serine/threonine kinase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT4G20440 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G44500 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G20440 |
| GO:0015030 | ISO | PLAZA Integrative Orthology | Cajal body | AT4G20440 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001163 | LSM domain, eukaryotic/archaea-type |
| IPR024788 | Malectin-like domain |
| IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR025875 | Leucine rich repeat 4 |
| IPR010920 | LSM domain superfamily |
| IPR000719 | Protein kinase domain |
| Mapman id | Description |
|---|---|
| 16.2.2.1 | RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-B |