Gene: Pp3c3_24910

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_24910
  • Transcript Identifier Pp3c3_24910V3.2
  • Gene Type Coding gene
  • Location Chr03 : 17055452-17056375 : positive

Gene Family Information

  • ID HOM05D004370
  • #Genes/#Species 164/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_24910V3.2
  • pacid 32941355
  • alias Pp1s333_58V6
  • alias Phpat.003G098100
  • alias Phypa_53669
  • uniprot A0A2K1KVY0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0071004
IBA
GOA DatabaseU2-type prespliceosome
GO:0046540
IBA
GOA DatabaseU4/U6 x U5 tri-snRNP complex
GO:0005687
IBA
GOA DatabaseU4 snRNP
GO:0005686
IBA
GOA DatabaseU2 snRNP
GO:0005685
IBA
GOA DatabaseU1 snRNP
GO:0005682
IBA
GOA DatabaseU5 snRNP
GO:0005737
IBA
GOA Databasecytoplasm
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT4G20440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G20440
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G44500
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT4G20440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
Mapman id Description
16.2.2.1 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-B