Gene: Cc09_g05790

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc09_g05790
  • Transcript Identifier Cc09_g05790.1
  • Gene Type Coding gene
  • Location chr9 : 6200772-6203313 : positive

Gene Family Information

  • ID HOM05D004370
  • #Genes/#Species 164/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9PV94
  • UniProtKB P27048
  • UniProtKB Q9N1Q0
  • UniProtKB D7MM06
  • UniProtKB Q9FI15
  • UniProtKB B9SV79
  • id GSCOCG00033412001

Descriptions

  • Description Small nuclear ribonucleoprotein-associated protein B'
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT4G20440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT4G20440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G20440
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G44500
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT4G20440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
IPR017131 Small ribonucleoprotein associated, SmB/SmN
Mapman id Description
16.2.2.1 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-B