Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G060100 Manihot esculenta HOM05D004370 ORTHO05D005084 1.3e-115 420.2 291 100.0
Cpa.g.sc285.3 Carica papaya HOM05D004370 ORTHO05D005084 1.4e-90 337.0 292 79.1
ClCG01G025430 Citrullus lanatus HOM05D004370 ORTHO05D005084 3.0e-85 319.3 299 75.3
MELO3C007041.2 Cucumis melo HOM05D004370 ORTHO05D005084 3.0e-85 319.3 299 73.9
Ciclev10018122m.g Citrus clementina HOM05D004370 ORTHO05D005084 4.0e-85 318.9 194 86.6
Sed0020090 Sechium edule HOM05D004370 ORTHO05D005084 5.2e-85 318.5 289 80.6
Manes.14G127000 Manihot esculenta HOM05D004370 ORTHO05D005084 1.2e-84 317.4 293 82.3
CsaV3_6G052680 Cucumis sativus L. HOM05D004370 ORTHO05D005084 2.6e-84 316.2 299 75.6
Gohir.D10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 2.6e-84 316.2 298 72.1
Duzib160G0857 Durio zibethinus HOM05D004370 ORTHO05D005084 1.7e-83 313.5 294 75.2
MD06G1169400 Malus domestica HOM05D004370 ORTHO05D005084 4.8e-83 312.0 296 75.3
Gorai.011G006200 Gossypium raimondii HOM05D004370 ORTHO05D005084 1.2e-81 307.4 298 71.5
SHI20646 Sapria himalayana HOM05D004370 ORTHO05D005084 1.7e-80 303.5 248 67.3
Gohir.A10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 1.5e-79 300.4 294 70.7
MD14G1174700 Malus domestica HOM05D004370 ORTHO05D005084 5.5e-79 298.5 294 75.5
Potri.001G440100 Populus trichocarpa HOM05D004370 ORTHO05D005084 1.2e-78 297.4 290 74.5
TAR633G2348 Trochodendron aralioides HOM05D004370 ORTHO05D005084 3.0e-77 292.7 294 68.7
Psat2g015400 Pisum sativum HOM05D004370 ORTHO05D005084 4.0e-77 292.4 291 73.2
Sabra16G0297300 Salix brachista HOM05D004370 ORTHO05D005084 4.0e-77 292.4 290 74.5
CiPaw.13G141500 Carya illinoinensis HOM05D004370 ORTHO05D005084 8.8e-77 291.2 196 81.6
MBI05_g12101_MAGBIO Magnolia biondii HOM05D004370 ORTHO05D005084 1.2e-76 290.8 291 70.8
Potri.011G155700 Populus trichocarpa HOM05D004370 ORTHO05D005084 1.2e-76 290.8 195 82.1
TPR.G12528 Trifolium pratense HOM05D004370 ORTHO05D005084 1.2e-76 290.8 291 76.6
Dinv04119 Davidia involucrata HOM05D004370 ORTHO05D005084 2.0e-76 290.0 287 74.6
Nn1g09322 Nelumbo nucifera HOM05D004370 ORTHO05D005084 2.0e-76 290.0 163 92.0
Medtr5g092010 Medicago truncatula HOM05D004370 ORTHO05D005084 5.7e-76 288.5 291 69.8
CANSAT25G2913 Cannabis sativa HOM05D004370 ORTHO05D005084 9.8e-76 287.7 163 89.6
arahy.Tifrunner.gnm1.ann1.B8WTIA Arachis hypogaea HOM05D004370 ORTHO05D005084 2.8e-75 286.2 192 81.8
arahy.Tifrunner.gnm1.ann1.TBHV4Q Arachis hypogaea HOM05D004370 ORTHO05D005084 2.8e-75 286.2 192 81.8
Lalb_Chr10g0106891 Lupinus albus HOM05D004370 ORTHO05D005084 2.8e-75 286.2 192 80.2
Atru.chr10.664 Acer truncatum HOM05D004370 ORTHO05D005084 3.7e-75 285.8 171 88.9
Prupe.5G168200 Prunus persica HOM05D004370 ORTHO05D005084 3.7e-75 285.8 308 69.2
CSS0027232 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 6.3e-75 285.0 168 87.5
ECA238G0265 Erigeron canadensis HOM05D004370 ORTHO05D005084 1.4e-74 283.9 294 71.1
PGR142G3562 Punica granatum HOM05D004370 ORTHO05D005084 1.4e-74 283.9 293 74.4
Sc10g0006890 Simmondsia chinensis HOM05D004370 ORTHO05D005084 1.8e-74 283.5 294 71.4
CARHR227270 Cardamine hirsuta HOM05D004370 ORTHO05D005084 3.1e-74 282.7 170 87.6
A08p14890 Brassica napus HOM05D004370 ORTHO05D005084 7.0e-74 281.6 197 76.6
Solyc01g094540.4 Solanum lycopersicum HOM05D004370 ORTHO05D005084 9.1e-74 281.2 291 72.2
HanXRQChr10g0304281 Helianthus annuus HOM05D004370 ORTHO05D005084 2.0e-73 280.0 192 77.6
Sopen01g038350 Solanum pennellii HOM05D004370 ORTHO05D005084 2.0e-73 280.0 291 72.2
Aqoxy1G00534 Aquilegia oxysepala HOM05D004370 ORTHO05D005084 2.7e-73 279.6 157 90.4
AL7G33430 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 2.7e-73 279.6 197 81.2
AT4G20440 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 2.7e-73 279.6 196 81.6
BolC3t20578H Brassica oleracea HOM05D004370 ORTHO05D005084 2.7e-73 279.6 197 76.1
HanXRQChr08g0218671 Helianthus annuus HOM05D004370 ORTHO05D005084 2.7e-73 279.6 192 77.6
LjContig00310g0017486 Lotus japonicus HOM05D004370 ORTHO05D005084 5.9e-73 278.5 189 79.9
Ca_06302_v3 Cicer arietinum L. HOM05D004370 ORTHO05D005084 7.7e-73 278.1 299 69.9
Hma1.2p1_0892F.1_g233360 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 7.7e-73 278.1 191 81.2
BcaNung04159 Brassica carinata HOM05D004370 ORTHO05D005084 1.0e-72 277.7 197 77.2
Sp7g18800 Schrenkiella parvula HOM05D004370 ORTHO05D005084 1.7e-72 276.9 151 94.0
Lsat_1_v5_gn_2_112821 Lactuca sativa HOM05D004370 ORTHO05D005084 2.3e-72 276.6 153 90.2
Lalb_Chr04g0248641 Lupinus albus HOM05D004370 ORTHO05D005084 2.3e-72 276.6 166 86.1
Phvul.008G264900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 2.3e-72 276.6 197 78.7
BcaB03g11674 Brassica carinata HOM05D004370 ORTHO05D005084 2.9e-72 276.2 194 76.3
BcaC09g51319 Brassica carinata HOM05D004370 ORTHO05D005084 2.9e-72 276.2 187 80.2
C01p14450 Brassica napus HOM05D004370 ORTHO05D005084 2.9e-72 276.2 187 80.2
BolC1t01401H Brassica oleracea HOM05D004370 ORTHO05D005084 2.9e-72 276.2 187 80.2
Lsat_1_v5_gn_8_20501 Lactuca sativa HOM05D004370 ORTHO05D005084 2.9e-72 276.2 153 89.5
Aa31LG6G2820 Aethionema arabicum HOM05D004370 ORTHO05D005084 5.0e-72 275.4 151 92.7
Aa31LG9G8700 Aethionema arabicum HOM05D004370 ORTHO05D005084 6.6e-72 275.0 151 92.7
TWI15G0591 Tripterygium wilfordii HOM05D004370 ORTHO05D005084 8.6e-72 274.6 145 95.9
Actinidia35547 Actinidia chinensis HOM05D004370 ORTHO05D005084 1.1e-71 274.2 288 67.4
A01p12130 Brassica napus HOM05D004370 ORTHO05D005084 1.1e-71 274.2 187 80.2
BraA01t01156Z Brassica rapa HOM05D004370 ORTHO05D005084 1.1e-71 274.2 187 80.2
CSS0048817 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 1.1e-71 274.2 168 85.1
CDE10G0749 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 1.1e-71 274.2 192 78.1
Lj5C81T13 Lonicera japonica HOM05D004370 ORTHO05D005084 1.1e-71 274.2 165 86.7
Glyma.14G025900 Glycine max HOM05D004370 ORTHO05D005084 1.5e-71 273.9 170 85.3
VMungo0647G0361 Vigna mungo HOM05D004370 ORTHO05D005084 1.5e-71 273.9 171 86.5
BcaNung05680 Brassica carinata HOM05D004370 ORTHO05D005084 1.9e-71 273.5 166 86.7
Carub.0007s2072 Capsella rubella HOM05D004370 ORTHO05D005084 1.9e-71 273.5 150 93.3
Rhsim07G0192400 Rhododendron simsii HOM05D004370 ORTHO05D005084 1.9e-71 273.5 189 78.3
Rhsim07G0192600 Rhododendron simsii HOM05D004370 ORTHO05D005084 1.9e-71 273.5 189 78.3
COL.COLO4_26893 Corchorus olitorius HOM05D004370 ORTHO05D005084 5.5e-71 271.9 295 71.2
Thhalv10026002m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 7.2e-71 271.6 192 80.7
BraA08t33472Z Brassica rapa HOM05D000106 ORTHO05D005084 1.6e-70 270.4 191 75.4
THA.LOC104806243 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 1.6e-70 270.4 151 90.7
AT5G44500 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 2.8e-70 269.6 192 76.0
Phvul.008G234900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 2.8e-70 269.6 185 80.0
Hma1.2p1_0258F.1_g104020 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 3.6e-70 269.2 165 87.9
FAN04G0169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 4.7e-70 268.9 292 65.4
Lj9P663T35 Lonicera japonica HOM05D004370 ORTHO05D005084 6.1e-70 268.5 165 85.5
PGSC0003DMG400000167 Solanum tuberosum HOM05D004370 ORTHO05D005084 8.0e-70 268.1 193 79.8
BcaC01g00671 Brassica carinata HOM05D004370 ORTHO05D005084 1.4e-69 267.3 195 74.9
C03p82950 Brassica napus HOM05D004370 ORTHO05D005084 1.4e-69 267.3 195 74.9
Migut.E01529 Erythranthe guttata HOM05D004370 ORTHO05D005084 1.8e-69 266.9 163 84.0
Glyma.02G288900 Glycine max HOM05D004370 ORTHO05D005084 3.0e-69 266.2 152 91.4
SalBow1G7578 Salvia bowleyana HOM05D004370 ORTHO05D005084 3.0e-69 266.2 163 84.7
Sed0027177 Sechium edule HOM05D004370 ORTHO05D005084 3.0e-69 266.2 291 72.2
AL8G15320 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 6.8e-69 265.0 152 88.8
Carub.0008s0400 Capsella rubella HOM05D004370 ORTHO05D005084 6.8e-69 265.0 193 75.1
CDE10G0801 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 8.9e-69 264.6 148 91.2
Oeu031694.1 Olea europaea HOM05D004370 ORTHO05D005084 1.2e-68 264.2 299 61.2
CAN.G78.61 Capsicum annuum HOM05D004370 ORTHO05D005084 1.5e-68 263.8 186 76.9
MSTRG.1661 Avicennia marina HOM05D004370 ORTHO05D005084 2.0e-68 263.5 163 83.4
FAN13G1169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 2.0e-68 263.5 190 75.8
Prupe.6G342400 Prunus persica HOM05D004370 ORTHO05D005084 2.0e-68 263.5 291 72.2
RcHm_v2.0_Chr3g0451231 Rosa chinensis HOM05D004370 ORTHO05D005084 2.0e-68 263.5 171 84.2
FAN08G0371 Fragaria x ananassa HOM05D004370 ORTHO05D005084 9.8e-68 261.2 292 60.6
Thhalv10001000m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 2.8e-67 259.6 191 76.4
Solyc05g049950.3 Solanum lycopersicum HOM05D004370 ORTHO05D005084 3.7e-67 259.2 154 85.7
Sopen05g028310 Solanum pennellii HOM05D004370 ORTHO05D005084 3.7e-67 259.2 154 85.7
PGSC0003DMG400021647 Solanum tuberosum HOM05D004370 ORTHO05D005084 3.7e-67 259.2 154 85.7
Cfa008716 Carpinus fangiana HOM05D004370 ORTHO05D005084 4.9e-67 258.8 296 68.2
FvH4_5g05920 Fragaria vesca HOM05D004370 ORTHO05D005084 4.9e-67 258.8 297 63.3
FAN18G1507 Fragaria x ananassa HOM05D004370 ORTHO05D005084 4.9e-67 258.8 297 63.3
Oeu043883.1 Olea europaea HOM05D004370 ORTHO05D005084 6.3e-67 258.5 196 75.0
QL03p043504 Quercus lobata HOM05D004370 ORTHO05D005084 8.3e-67 258.1 192 76.0
AUR62000301 Chenopodium quinoa HOM05D004370 ORTHO05D005084 5.4e-66 255.4 153 86.3
AUR62009174 Chenopodium quinoa HOM05D004370 ORTHO05D005084 5.4e-66 255.4 153 86.3
Haze_11726 Corylus avellana HOM05D004370 ORTHO05D005084 5.4e-66 255.4 298 65.8
Medtr8g080090 Medicago truncatula HOM05D004370 ORTHO05D005084 7.0e-66 255.0 287 69.7
SGA_v2.0_scaffold169G38655 Striga asiatica HOM05D004370 ORTHO05D005084 9.2e-66 254.6 163 81.6
Ah.16g102810 Amaranthus hybridus HOM05D004370 ORTHO05D005084 2.0e-65 253.4 151 86.8
FAN13G1413 Fragaria x ananassa HOM05D004370 ORTHO05D005084 2.7e-65 253.1 288 62.2
QL06p021586 Quercus lobata HOM05D004370 ORTHO05D005084 4.5e-65 252.3 253 69.6
SGA_v2.0_scaffold163G38072 Striga asiatica HOM05D004370 ORTHO05D005084 4.5e-65 252.3 258 69.8
Thecc.06G007600 Theobroma cacao HOM05D004370 ORTHO05D005084 7.8e-65 251.5 149 88.6
DCAR_006631 Daucus carota HOM05D004370 ORTHO05D005084 1.7e-64 250.4 195 71.3
THA.LOC104812077 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 3.9e-64 249.2 157 84.1
Migut.A00202 Erythranthe guttata HOM05D004370 ORTHO05D005084 1.9e-63 246.9 144 87.5
Ah.10g036820 Amaranthus hybridus HOM05D004370 ORTHO05D005084 3.3e-63 246.1 153 82.4
HPP92_018640 Vanilla planifolia HOM05D004370 ORTHO05D005084 5.6e-63 245.4 256 63.7
Cc09_g05790 Coffea canephora HOM05D004370 ORTHO05D005084 7.3e-63 245.0 151 84.1
RcHm_v2.0_Chr7g0192911 Rosa chinensis HOM05D004370 ORTHO05D005084 1.2e-62 244.2 299 61.2
Eucgr.L00005 Eucalyptus grandis HOM05D004370 ORTHO05D005084 3.6e-62 242.7 300 67.3
Mapoly0023s0062 Marchantia polymorpha HOM05D004370 ORTHO05D005084 6.1e-62 241.9 169 77.5
Zm00001eb117150 Zea mays HOM05D004370 ORTHO05D005084 2.3e-61 240.0 195 66.7
Peaxi162Scf00020g00025 Petunia axillaris HOM05D004370 ORTHO05D005084 3.1e-61 239.6 141 87.2
Sabra11G0144100 Salix brachista HOM05D004370 ORTHO05D005084 5.2e-61 238.8 153 85.6
unitig_899.g14482 Utricularia gibba HOM05D004370 ORTHO05D005084 1.1e-58 231.1 142 84.5
PSO339G5217 Papaver somniferum HOM05D004370 ORTHO05D005084 1.9e-58 230.3 289 63.3
PSO384G4426 Papaver somniferum HOM05D004370 ORTHO05D005084 1.9e-58 230.3 289 63.3
ATR0697G198 Amborella trichopoda HOM05D004370 ORTHO05D005084 1.3e-56 224.2 200 65.5
unitig_736.g22531 Utricularia gibba HOM05D004370 ORTHO05D005084 4.3e-55 219.2 136 83.8
CBR_g48393 Chara braunii HOM05D004370 ORTHO05D005084 7.3e-55 218.4 185 66.5
Lsat_1_v5_gn_8_16800 Lactuca sativa HOM05D004370 ORTHO05D005084 8.0e-54 214.9 122 87.7
C07p50900 Brassica napus HOM05D000106 ORTHO05D000160 1.4e-53 214.2 167 70.7
AUR62022051 Chenopodium quinoa HOM05D004370 ORTHO05D005084 8.9e-53 211.5 173 68.2
SEGI_35791 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 1.1e-50 204.5 169 68.6
A03p52450 Brassica napus HOM05D004370 ORTHO05D005084 3.2e-50 203.0 165 70.9
BcaNung05058 Brassica carinata HOM05D004370 ORTHO05D005084 7.1e-50 201.8 139 78.4
Zm00001eb300870 Zea mays HOM05D004370 ORTHO05D005084 6.6e-48 195.3 195 57.4
Cre14.g611150 Chlamydomonas reinhardtii HOM05D004370 ORTHO05D005084 1.5e-47 194.1 160 65.0
arahy.Tifrunner.gnm1.ann1.IZ2YN8 Arachis hypogaea HOM05D004370 ORTHO05D005084 6.2e-46 188.7 109 89.9
Dinv23904 Davidia involucrata HOM05D004370 ORTHO05D005084 5.8e-44 182.2 164 63.4
MCO12G128 Micromonas commoda HOM05D004370 ORTHO05D005084 9.9e-44 181.4 152 65.1
MD04G1223300 Malus domestica HOM05D004370 ORTHO05D005084 5.4e-42 175.6 124 75.0
arahy.Tifrunner.gnm1.ann1.1VG4JJ Arachis hypogaea HOM05D004370 ORTHO05D005084 3.1e-37 159.8 94 88.3
SMO367G1222 Selaginella moellendorffii HOM05D004370 ORTHO05D005084 7.6e-36 155.2 94 83.0
MD04G1002600 Malus domestica HOM05D004370 ORTHO05D005084 4.9e-35 152.5 103 76.7
Pp3c3_24850 Physcomitrium patens HOM05D004370 ORTHO05D005084 9.3e-34 148.3 190 51.1
Pp3c3_24900 Physcomitrium patens HOM05D004370 ORTHO05D005084 9.3e-34 148.3 190 51.1
Pp3c10_22940 Physcomitrium patens HOM05D004370 ORTHO05D005084 6.0e-33 145.6 187 49.7
Pp3c3_24910 Physcomitrium patens HOM05D004370 ORTHO05D005084 1.3e-32 144.4 168 52.4
PRCOL_00001809 Prasinoderma coloniale HOM05D004370 ORTHO05D005084 5.8e-28 129.0 138 53.6
AUR62009175 Chenopodium quinoa HOM05D004370 ORTHO05D005084 3.3e-23 113.2 200 44.5
Oeu011279.1 Olea europaea HOM05D004370 ORTHO05D005084 1.1e-18 98.2 53 88.7
BcaNung05387 Brassica carinata HOM05D004370 ORTHO05D005084 2.1e-14 84.0 85 56.5
SEGI_08107 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 1.1e-13 81.6 50 78.0
GSVIVG01034611001 Vitis vinifera HOM05D004370 ORTHO05D005084 1.1e-13 81.6 40 100.0
BraA03t14323Z Brassica rapa HOM05D004370 ORTHO05D005084 3.1e-13 80.1 109 51.4
EL10Ac1g00433 Beta vulgaris HOM05D004370 ORTHO05D005084 1.6e-06 57.8 67 50.7
CSS0022278 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 8.2e-06 55.5 65 53.8


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