Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1125600 Malus domestica HOM05D000228 ORTHO05D036620 1.1e-65 253.1 125 100.0
MD02G1125700 Malus domestica HOM05D000228 ORTHO05D036620 4.9e-24 114.8 69 76.8
Dinv40146 Davidia involucrata HOM05D000228 ORTHO05D001545 2.3e-10 69.3 76 46.1
Lalb_Chr17g0338771 Lupinus albus HOM05D000228 ORTHO05D001545 3.1e-10 68.9 76 44.7
arahy.Tifrunner.gnm1.ann1.FVA0CM Arachis hypogaea HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
arahy.Tifrunner.gnm1.ann1.XNR9AR Arachis hypogaea HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
CSS0034780 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
CSS0036491 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
CiPaw.07G063400 Carya illinoinensis HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Ca_24944_v3 Cicer arietinum L. HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Dinv31892 Davidia involucrata HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
ECA233G2080 Erigeron canadensis HOM05D000228 ORTHO05D001545 4.0e-10 68.6 77 46.8
FvH4_1g11070 Fragaria vesca HOM05D000228 ORTHO05D001545 4.0e-10 68.6 79 39.2
FAN19G0561 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.0e-10 68.6 79 39.2
FAN23G0813 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.0e-10 68.6 79 39.2
FAN28G1830 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.0e-10 68.6 79 39.2
Glyma.01G162200 Glycine max HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Glyma.11G081200 Glycine max HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
HanXRQChr04g0107401 Helianthus annuus HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Hma1.2p1_1598F.1_g292950 Hydrangea macrophylla HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Lsat_1_v5_gn_1_12220 Lactuca sativa HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Lalb_Chr09g0321431 Lupinus albus HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Lalb_Chr16g0377361 Lupinus albus HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Psat2g151880 Pisum sativum HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Potri.005G107600 Populus trichocarpa HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
Sabra05G0088100 Salix brachista HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
TPR.G25137 Trifolium pratense HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
TWI09G0739 Tripterygium wilfordii HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
VMungo1215G1821 Vigna mungo HOM05D000228 ORTHO05D001545 4.0e-10 68.6 76 44.7
arahy.Tifrunner.gnm1.ann1.FL0A4X Arachis hypogaea HOM05D000228 ORTHO05D001545 5.2e-10 68.2 79 41.8
CDE02G1347 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 5.2e-10 68.2 76 44.7
CDE04G2464 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 5.2e-10 68.2 76 44.7
Ah.03g134280 Amaranthus hybridus HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
arahy.Tifrunner.gnm1.ann1.BXI6FM Arachis hypogaea HOM05D000228 ORTHO05D001545 6.8e-10 67.8 79 41.8
arahy.Tifrunner.gnm1.ann1.J6X5FL Arachis hypogaea HOM05D000228 ORTHO05D001545 6.8e-10 67.8 79 41.8
EL10Ac6g13333 Beta vulgaris HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
AUR62026224 Chenopodium quinoa HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
AUR62026407 Chenopodium quinoa HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
Cc07_g11340 Coffea canephora HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
Eucgr.I02304 Eucalyptus grandis HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
PGR119G0284 Punica granatum HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
Hund16621 Selenicereus undatus HOM05D000228 ORTHO05D001545 6.8e-10 67.8 76 44.7
Aa31LG6G12760 Aethionema arabicum HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
AL7G15270 Arabidopsis lyrata HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
AT4G35800 Arabidopsis thaliana HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
arahy.Tifrunner.gnm1.ann1.9K73PE Arachis hypogaea HOM05D000228 ORTHO05D001545 8.9e-10 67.4 79 40.5
BcaC01g00521 Brassica carinata HOM05D000315 ORTHO05D001545 8.9e-10 67.4 76 46.1
BcaC01g00522 Brassica carinata HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
BcaNung00792 Brassica carinata HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
BcaNung04874 Brassica carinata HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
A01p02890 Brassica napus HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
C01p03210 Brassica napus HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
C03p80930 Brassica napus HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
BolC3t20350H Brassica oleracea HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
BraA01t00274Z Brassica rapa HOM05D000315 ORTHO05D001545 8.9e-10 67.4 76 46.1
BraA08t34114Z Brassica rapa HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
Carub.0007s0443 Capsella rubella HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
CARHR244170 Cardamine hirsuta HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
Thhalv10024193m.g Eutrema salsugineum HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
Sp7g33590 Schrenkiella parvula HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
THA.LOC104804281 Tarenaya hassleriana HOM05D000228 ORTHO05D001545 8.9e-10 67.4 76 46.1
Atru.chr3.911 Acer truncatum HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Dinv39555 Davidia involucrata HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Duzib187G1668 Durio zibethinus HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
ECA247G3915 Erigeron canadensis HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
FAN26G0663 Fragaria x ananassa HOM05D000228 ORTHO05D001545 1.2e-09 67.0 79 39.2
Gohir.A02G174500 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Gohir.A11G171700 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Gohir.D03G005300 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Gohir.D11G178600 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Gorai.003G005700 Gossypium raimondii HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Gorai.007G190500 Gossypium raimondii HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Lj4C801G10 Lonicera japonica HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
MD02G1123400 Malus domestica HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
MD15G1237200 Malus domestica HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Oeu012551.1 Olea europaea HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Oeu039718.1 Olea europaea HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Prupe.7G175200 Prunus persica HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
RcHm_v2.0_Chr2g0098331 Rosa chinensis HOM05D000228 ORTHO05D001545 1.2e-09 67.0 79 39.2
Thecc.01G011300 Theobroma cacao HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
vmacro04378 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
GSVIVG01008740001 Vitis vinifera HOM05D000228 ORTHO05D001545 1.2e-09 67.0 76 43.4
Aqoxy5G01098 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
Cfa007031 Carpinus fangiana HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
ClCG10G000460 Citrullus lanatus HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
Haze_03702 Corylus avellana HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
MELO3C013741.2 Cucumis melo HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
CsaV3_3G000490 Cucumis sativus L. HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
Medtr5g023020 Medicago truncatula HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
PSO541G3277 Papaver somniferum HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
PSO675G5068 Papaver somniferum HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
Phvul.002G104500 Phaseolus vulgaris HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
Sed0006002 Sechium edule HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
TAR376G0725 Trochodendron aralioides HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
TAR628G0489 Trochodendron aralioides HOM05D000228 ORTHO05D001545 1.5e-09 66.6 76 43.4
BcaC07g38102 Brassica carinata HOM05D000228 ORTHO05D001545 2.0e-09 66.2 74 45.9
CBR_g42147 Chara braunii HOM05D000228 ORTHO05D001545 2.0e-09 66.2 79 40.5
Ciclev10004088m.g Citrus clementina HOM05D000228 ORTHO05D001545 2.0e-09 66.2 72 44.4
ECA233G0514 Erigeron canadensis HOM05D000228 ORTHO05D001545 2.0e-09 66.2 77 44.2
MBI11_g09467_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D001545 2.0e-09 66.2 76 43.4
SEGI_13624 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 2.0e-09 66.2 99 35.4
Ciclev10001675m.g Citrus clementina HOM05D000228 ORTHO05D001545 2.6e-09 65.9 72 44.4
Duzib145G0004 Durio zibethinus HOM05D000228 ORTHO05D001545 2.6e-09 65.9 76 42.1
Manes.01G151000 Manihot esculenta HOM05D000228 ORTHO05D001545 2.6e-09 65.9 76 43.4
Sc03g0003780 Simmondsia chinensis HOM05D000228 ORTHO05D001545 2.6e-09 65.9 76 43.4
Zm00001eb416050 Zea mays HOM05D000228 ORTHO05D001545 2.6e-09 65.9 76 43.4
Ciclev10024686m.g Citrus clementina HOM05D000228 ORTHO05D001545 3.4e-09 65.5 76 42.1
ECA233G5495 Erigeron canadensis HOM05D000228 ORTHO05D001545 3.4e-09 65.5 77 44.2
Nitab4.5_0001696g0010 Nicotiana tabacum HOM05D000228 ORTHO05D001545 3.4e-09 65.5 76 42.1
Nitab4.5_0006892g0040 Nicotiana tabacum HOM05D000228 ORTHO05D001545 3.4e-09 65.5 76 42.1
COL.COLO4_22497 Corchorus olitorius HOM05D000228 ORTHO05D001545 4.4e-09 65.1 76 42.1
Glyma.09G278900 Glycine max HOM05D000228 ORTHO05D001545 4.4e-09 65.1 76 43.4
Lj2g0016023 Lotus japonicus HOM05D000228 ORTHO05D001545 4.4e-09 65.1 76 42.1
Nn6g31908 Nelumbo nucifera HOM05D000228 ORTHO05D001545 4.4e-09 65.1 76 43.4
Peaxi162Scf00328g00128 Petunia axillaris HOM05D000228 ORTHO05D001545 4.4e-09 65.1 76 42.1
QL06p052095 Quercus lobata HOM05D000228 ORTHO05D001545 4.4e-09 65.1 76 42.1
ATR0661G313 Amborella trichopoda HOM05D000228 ORTHO05D001545 5.8e-09 64.7 76 42.1
Aqoxy5G00747 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 5.8e-09 64.7 79 41.8
Eucgr.F01570 Eucalyptus grandis HOM05D000228 ORTHO05D001545 5.8e-09 64.7 76 42.1
Pp3c14_14540 Physcomitrium patens HOM05D000228 ORTHO05D001545 5.8e-09 64.7 79 39.2
Rhsim10G0205500 Rhododendron simsii HOM05D000228 ORTHO05D001545 5.8e-09 64.7 76 42.1
RhsimUnG0152400 Rhododendron simsii HOM05D000228 ORTHO05D001545 5.8e-09 64.7 76 42.1
vmacro20497 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 5.8e-09 64.7 76 42.1
arahy.Tifrunner.gnm1.ann1.248CB6 Arachis hypogaea HOM05D000228 ORTHO05D001545 7.5e-09 64.3 77 41.6
CAN.G890.26 Capsicum annuum HOM05D000228 ORTHO05D001545 7.5e-09 64.3 76 40.8
Mapoly0070s0048 Marchantia polymorpha HOM05D000228 ORTHO05D001545 7.5e-09 64.3 79 39.2
Pp3c1_32300 Physcomitrium patens HOM05D000228 ORTHO05D001545 7.5e-09 64.3 99 35.4
arahy.Tifrunner.gnm1.ann1.32E6CA Arachis hypogaea HOM05D000228 ORTHO05D001545 9.9e-09 63.9 77 41.6
FAN19G0156 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.9e-09 63.9 76 40.8
FAN23G1904 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.9e-09 63.9 76 40.8
FAN26G3056 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.9e-09 63.9 76 40.8
FAN28G2440 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.9e-09 63.9 76 40.8
RcHm_v2.0_Chr2g0098321 Rosa chinensis HOM05D000228 ORTHO05D001545 9.9e-09 63.9 76 40.8
SMO203G0153 Selaginella moellendorffii HOM05D000228 ORTHO05D001545 9.9e-09 63.9 79 39.2
Migut.N01734 Erythranthe guttata HOM05D000228 ORTHO05D001545 1.3e-08 63.5 76 42.1
Os05g0151000 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D001545 1.3e-08 63.5 76 42.1
Solyc02g083350.4 Solanum lycopersicum HOM05D000228 ORTHO05D001545 1.3e-08 63.5 76 40.8
Sopen02g028130 Solanum pennellii HOM05D000228 ORTHO05D001545 1.3e-08 63.5 76 40.8
PGSC0003DMG400003590 Solanum tuberosum HOM05D000228 ORTHO05D001545 1.3e-08 63.5 76 40.8
SGA_v2.0_scaffold127G34014 Striga asiatica HOM05D000228 ORTHO05D001545 1.3e-08 63.5 76 42.1
Ah.02g129100 Amaranthus hybridus HOM05D000228 ORTHO05D001545 1.7e-08 63.2 76 42.1
HPP92_022754 Vanilla planifolia HOM05D000228 ORTHO05D001545 1.7e-08 63.2 76 43.4
Actinidia17401 Actinidia chinensis HOM05D000228 ORTHO05D001545 3.7e-08 62.0 76 42.1
SEGI_24851 Sequoiadendron giganteum HOM05D000228 ORTHO05D001545 6.4e-08 61.2 76 40.8
SGA_v2.0_scaffold116G32283 Striga asiatica HOM05D000228 ORTHO05D001545 8.3e-08 60.8 76 40.8
SGA_v2.0_scaffold15G07314 Striga asiatica HOM05D000228 ORTHO05D001545 8.3e-08 60.8 79 39.2
Psat5g200440 Pisum sativum HOM05D000228 ORTHO05D001545 1.4e-07 60.1 76 39.5
unitig_0.g553 Utricularia gibba HOM05D000228 ORTHO05D001545 1.4e-07 60.1 68 42.6
CSS0032530 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 3.2e-07 58.9 71 42.3
MCO15G374 Micromonas commoda HOM05D000228 ORTHO05D001545 5.4e-07 58.2 105 32.4
PRCOL_00006783 Prasinoderma coloniale HOM05D000228 ORTHO05D001545 5.4e-07 58.2 79 35.4


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