Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00310g0017486 Lotus japonicus HOM05D004370 ORTHO05D005084 5.5e-100 368.2 280 100.0
Lalb_Chr10g0106891 Lupinus albus HOM05D004370 ORTHO05D005084 1.5e-86 323.6 178 93.3
arahy.Tifrunner.gnm1.ann1.B8WTIA Arachis hypogaea HOM05D004370 ORTHO05D005084 2.2e-85 319.7 179 92.7
arahy.Tifrunner.gnm1.ann1.TBHV4Q Arachis hypogaea HOM05D004370 ORTHO05D005084 2.2e-85 319.7 179 92.7
Phvul.008G264900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 8.5e-85 317.8 177 93.8
Ca_06302_v3 Cicer arietinum L. HOM05D004370 ORTHO05D005084 1.4e-84 317.0 194 87.6
Psat2g015400 Pisum sativum HOM05D004370 ORTHO05D005084 1.9e-84 316.6 178 92.1
TPR.G12528 Trifolium pratense HOM05D004370 ORTHO05D005084 6.1e-83 311.6 178 92.7
Phvul.008G234900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 3.0e-82 309.3 177 91.5
VMungo0647G0361 Vigna mungo HOM05D004370 ORTHO05D005084 1.7e-80 303.5 171 92.4
MBI05_g12101_MAGBIO Magnolia biondii HOM05D004370 ORTHO05D005084 6.3e-80 301.6 178 87.6
Medtr5g092010 Medicago truncatula HOM05D004370 ORTHO05D005084 3.1e-79 299.3 178 89.3
Glyma.14G025900 Glycine max HOM05D004370 ORTHO05D005084 7.0e-79 298.1 172 91.3
Lalb_Chr04g0248641 Lupinus albus HOM05D004370 ORTHO05D005084 3.5e-78 295.8 168 89.3
CsaV3_6G052680 Cucumis sativus L. HOM05D004370 ORTHO05D005084 1.3e-77 293.9 180 86.7
Cpa.g.sc285.3 Carica papaya HOM05D004370 ORTHO05D005084 5.0e-77 292.0 186 83.9
CiPaw.13G141500 Carya illinoinensis HOM05D004370 ORTHO05D005084 1.5e-76 290.4 178 87.6
MD06G1169400 Malus domestica HOM05D004370 ORTHO05D005084 1.5e-76 290.4 180 85.6
Ciclev10018122m.g Citrus clementina HOM05D004370 ORTHO05D005084 2.5e-76 289.7 181 84.5
MELO3C007041.2 Cucumis melo HOM05D004370 ORTHO05D005084 2.5e-76 289.7 180 85.6
Prupe.5G168200 Prunus persica HOM05D004370 ORTHO05D005084 3.2e-76 289.3 179 86.0
Dinv04119 Davidia involucrata HOM05D004370 ORTHO05D005084 1.8e-74 283.5 165 89.1
ClCG01G025430 Citrullus lanatus HOM05D004370 ORTHO05D005084 1.1e-73 280.8 196 82.7
Medtr8g080090 Medicago truncatula HOM05D004370 ORTHO05D005084 1.1e-73 280.8 171 88.3
Atru.chr10.664 Acer truncatum HOM05D004370 ORTHO05D005084 1.5e-73 280.4 168 85.1
Glyma.02G288900 Glycine max HOM05D004370 ORTHO05D005084 1.5e-73 280.4 152 95.4
Duzib160G0857 Durio zibethinus HOM05D004370 ORTHO05D005084 2.0e-73 280.0 185 81.6
Nn1g09322 Nelumbo nucifera HOM05D004370 ORTHO05D005084 2.0e-73 280.0 164 89.0
MD14G1174700 Malus domestica HOM05D004370 ORTHO05D005084 4.4e-73 278.9 176 85.2
Sed0020090 Sechium edule HOM05D004370 ORTHO05D005084 4.4e-73 278.9 180 83.3
CSS0027232 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 5.7e-73 278.5 167 86.2
Hma1.2p1_0892F.1_g233360 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 5.7e-73 278.5 180 84.4
CARHR227270 Cardamine hirsuta HOM05D004370 ORTHO05D005084 7.4e-73 278.1 174 83.9
CANSAT25G2913 Cannabis sativa HOM05D004370 ORTHO05D005084 2.2e-72 276.6 164 87.8
Prupe.6G342400 Prunus persica HOM05D004370 ORTHO05D005084 1.1e-71 274.2 161 87.6
Sc10g0006890 Simmondsia chinensis HOM05D004370 ORTHO05D005084 1.8e-71 273.5 183 80.9
CSS0048817 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 2.4e-71 273.1 167 85.0
ECA238G0265 Erigeron canadensis HOM05D004370 ORTHO05D005084 3.1e-71 272.7 180 81.1
Manes.06G060100 Manihot esculenta HOM05D004370 ORTHO05D005084 3.1e-71 272.7 189 79.9
Cfa008716 Carpinus fangiana HOM05D004370 ORTHO05D005084 5.3e-71 271.9 155 90.3
TAR633G2348 Trochodendron aralioides HOM05D004370 ORTHO05D005084 5.3e-71 271.9 195 75.4
AL8G15320 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 7.0e-71 271.6 178 77.5
AT5G44500 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 7.0e-71 271.6 166 80.7
HanXRQChr10g0304281 Helianthus annuus HOM05D004370 ORTHO05D005084 7.0e-71 271.6 178 82.0
Sp7g18800 Schrenkiella parvula HOM05D004370 ORTHO05D005084 1.2e-70 270.8 155 89.0
HanXRQChr08g0218671 Helianthus annuus HOM05D004370 ORTHO05D005084 1.6e-70 270.4 178 81.5
Aa31LG6G2820 Aethionema arabicum HOM05D004370 ORTHO05D005084 2.6e-70 269.6 155 89.0
COL.COLO4_26893 Corchorus olitorius HOM05D004370 ORTHO05D005084 2.6e-70 269.6 179 79.9
Rhsim07G0192400 Rhododendron simsii HOM05D004370 ORTHO05D005084 2.6e-70 269.6 184 79.9
Rhsim07G0192600 Rhododendron simsii HOM05D004370 ORTHO05D005084 2.6e-70 269.6 184 79.9
Aa31LG9G8700 Aethionema arabicum HOM05D004370 ORTHO05D005084 4.5e-70 268.9 155 89.0
Haze_11726 Corylus avellana HOM05D004370 ORTHO05D005084 5.9e-70 268.5 153 90.2
Manes.14G127000 Manihot esculenta HOM05D004370 ORTHO05D005084 5.9e-70 268.5 174 82.8
QL06p021586 Quercus lobata HOM05D004370 ORTHO05D005084 5.9e-70 268.5 178 82.6
MSTRG.1661 Avicennia marina HOM05D004370 ORTHO05D005084 7.7e-70 268.1 171 81.3
BcaC09g51319 Brassica carinata HOM05D004370 ORTHO05D005084 1.0e-69 267.7 174 80.5
C01p14450 Brassica napus HOM05D004370 ORTHO05D005084 1.0e-69 267.7 174 80.5
BolC1t01401H Brassica oleracea HOM05D004370 ORTHO05D005084 1.0e-69 267.7 174 80.5
Sopen01g038350 Solanum pennellii HOM05D004370 ORTHO05D005084 1.0e-69 267.7 182 79.1
FAN04G0169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.3e-69 267.3 178 81.5
SHI20646 Sapria himalayana HOM05D004370 ORTHO05D005084 1.3e-69 267.3 177 80.2
A01p12130 Brassica napus HOM05D004370 ORTHO05D005084 1.7e-69 266.9 174 80.5
BraA01t01156Z Brassica rapa HOM05D004370 ORTHO05D005084 1.7e-69 266.9 174 80.5
Solyc01g094540.4 Solanum lycopersicum HOM05D004370 ORTHO05D005084 2.2e-69 266.5 182 78.6
THA.LOC104806243 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 3.8e-69 265.8 156 86.5
AT4G20440 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 5.0e-69 265.4 152 88.8
Lj5C81T13 Lonicera japonica HOM05D004370 ORTHO05D005084 5.0e-69 265.4 171 81.9
Lsat_1_v5_gn_2_112821 Lactuca sativa HOM05D004370 ORTHO05D005084 6.5e-69 265.0 152 88.2
Migut.E01529 Erythranthe guttata HOM05D004370 ORTHO05D005084 8.5e-69 264.6 163 82.2
Lsat_1_v5_gn_8_20501 Lactuca sativa HOM05D004370 ORTHO05D005084 8.5e-69 264.6 152 87.5
Carub.0008s0400 Capsella rubella HOM05D004370 ORTHO05D005084 1.5e-68 263.8 183 74.9
AL7G33430 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 1.9e-68 263.5 180 77.8
Thhalv10026002m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 1.9e-68 263.5 151 88.7
Potri.001G440100 Populus trichocarpa HOM05D004370 ORTHO05D005084 1.9e-68 263.5 177 80.8
PGR142G3562 Punica granatum HOM05D004370 ORTHO05D005084 1.9e-68 263.5 176 79.5
SalBow1G7578 Salvia bowleyana HOM05D004370 ORTHO05D005084 2.5e-68 263.1 162 82.1
Aqoxy1G00534 Aquilegia oxysepala HOM05D004370 ORTHO05D005084 3.2e-68 262.7 178 77.5
BcaB03g11674 Brassica carinata HOM05D004370 ORTHO05D005084 3.2e-68 262.7 173 79.8
BcaC01g00671 Brassica carinata HOM05D004370 ORTHO05D005084 3.2e-68 262.7 182 76.4
A08p14890 Brassica napus HOM05D004370 ORTHO05D005084 3.2e-68 262.7 173 79.8
C03p82950 Brassica napus HOM05D004370 ORTHO05D005084 3.2e-68 262.7 182 76.4
Hma1.2p1_0258F.1_g104020 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 3.2e-68 262.7 175 81.1
Sed0027177 Sechium edule HOM05D004370 ORTHO05D005084 3.2e-68 262.7 176 79.5
CDE10G0749 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 5.5e-68 261.9 180 77.2
Lj9P663T35 Lonicera japonica HOM05D004370 ORTHO05D005084 5.5e-68 261.9 192 75.5
Actinidia35547 Actinidia chinensis HOM05D004370 ORTHO05D005084 7.2e-68 261.5 183 77.6
BolC3t20578H Brassica oleracea HOM05D004370 ORTHO05D005084 7.2e-68 261.5 173 79.8
Potri.011G155700 Populus trichocarpa HOM05D004370 ORTHO05D005084 7.2e-68 261.5 187 77.0
Gohir.D10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 9.4e-68 261.2 190 75.8
SGA_v2.0_scaffold163G38072 Striga asiatica HOM05D004370 ORTHO05D005084 9.4e-68 261.2 171 78.9
BcaNung04159 Brassica carinata HOM05D004370 ORTHO05D005084 1.2e-67 260.8 187 74.9
BcaNung05680 Brassica carinata HOM05D004370 ORTHO05D005084 1.2e-67 260.8 179 78.8
Carub.0007s2072 Capsella rubella HOM05D004370 ORTHO05D005084 1.6e-67 260.4 174 79.9
DCAR_006631 Daucus carota HOM05D004370 ORTHO05D005084 1.6e-67 260.4 176 77.8
FvH4_5g05920 Fragaria vesca HOM05D004370 ORTHO05D005084 2.7e-67 259.6 178 79.2
FAN18G1507 Fragaria x ananassa HOM05D004370 ORTHO05D005084 2.7e-67 259.6 178 79.2
FAN08G0371 Fragaria x ananassa HOM05D004370 ORTHO05D005084 3.6e-67 259.2 178 78.7
FAN13G1169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 3.6e-67 259.2 178 78.7
RcHm_v2.0_Chr3g0451231 Rosa chinensis HOM05D004370 ORTHO05D005084 4.7e-67 258.8 175 81.7
PGSC0003DMG400000167 Solanum tuberosum HOM05D004370 ORTHO05D005084 4.7e-67 258.8 165 81.2
Gohir.A10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 6.1e-67 258.5 187 77.0
TWI15G0591 Tripterygium wilfordii HOM05D004370 ORTHO05D005084 2.3e-66 256.5 146 89.7
CDE10G0801 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 4.0e-66 255.8 149 85.9
Oeu031694.1 Olea europaea HOM05D004370 ORTHO05D005084 4.0e-66 255.8 198 72.7
Oeu043883.1 Olea europaea HOM05D004370 ORTHO05D005084 4.0e-66 255.8 178 77.0
SGA_v2.0_scaffold169G38655 Striga asiatica HOM05D004370 ORTHO05D005084 4.0e-66 255.8 170 77.6
Gorai.011G006200 Gossypium raimondii HOM05D004370 ORTHO05D005084 5.2e-66 255.4 187 76.5
Thhalv10001000m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 2.0e-65 253.4 156 80.8
CAN.G78.61 Capsicum annuum HOM05D004370 ORTHO05D005084 4.4e-65 252.3 176 77.3
FAN13G1413 Fragaria x ananassa HOM05D004370 ORTHO05D005084 5.7e-65 251.9 174 77.6
QL03p043504 Quercus lobata HOM05D004370 ORTHO05D005084 5.7e-65 251.9 178 77.5
BraA08t33472Z Brassica rapa HOM05D000106 ORTHO05D005084 7.5e-65 251.5 167 78.4
Ah.16g102810 Amaranthus hybridus HOM05D004370 ORTHO05D005084 2.8e-64 249.6 151 83.4
Solyc05g049950.3 Solanum lycopersicum HOM05D004370 ORTHO05D005084 4.8e-64 248.8 165 78.2
Sopen05g028310 Solanum pennellii HOM05D004370 ORTHO05D005084 4.8e-64 248.8 165 78.2
Sabra16G0297300 Salix brachista HOM05D004370 ORTHO05D005084 6.3e-64 248.4 168 79.8
HPP92_018640 Vanilla planifolia HOM05D004370 ORTHO05D005084 1.4e-63 247.3 182 75.3
PGSC0003DMG400021647 Solanum tuberosum HOM05D004370 ORTHO05D005084 1.8e-63 246.9 164 78.0
Ah.10g036820 Amaranthus hybridus HOM05D004370 ORTHO05D005084 5.4e-63 245.4 153 81.0
AUR62000301 Chenopodium quinoa HOM05D004370 ORTHO05D005084 7.0e-63 245.0 153 81.0
AUR62009174 Chenopodium quinoa HOM05D004370 ORTHO05D005084 7.0e-63 245.0 153 81.0
RcHm_v2.0_Chr7g0192911 Rosa chinensis HOM05D004370 ORTHO05D005084 2.7e-62 243.0 152 83.6
THA.LOC104812077 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 5.9e-62 241.9 156 80.8
Eucgr.L00005 Eucalyptus grandis HOM05D004370 ORTHO05D005084 5.5e-60 235.3 158 78.5
Thecc.06G007600 Theobroma cacao HOM05D004370 ORTHO05D005084 7.2e-60 235.0 149 81.9
Cc09_g05790 Coffea canephora HOM05D004370 ORTHO05D005084 3.6e-59 232.6 155 78.7
Mapoly0023s0062 Marchantia polymorpha HOM05D004370 ORTHO05D005084 3.6e-59 232.6 167 77.2
Migut.A00202 Erythranthe guttata HOM05D004370 ORTHO05D005084 4.7e-59 232.3 145 81.4
Peaxi162Scf00020g00025 Petunia axillaris HOM05D004370 ORTHO05D005084 1.2e-57 227.6 181 69.6
unitig_899.g14482 Utricularia gibba HOM05D004370 ORTHO05D005084 1.5e-57 227.3 143 81.8
Zm00001eb117150 Zea mays HOM05D004370 ORTHO05D005084 4.4e-57 225.7 183 70.5
Sabra11G0144100 Salix brachista HOM05D004370 ORTHO05D005084 8.3e-56 221.5 159 76.7
PSO339G5217 Papaver somniferum HOM05D004370 ORTHO05D005084 2.4e-55 219.9 178 69.1
PSO384G4426 Papaver somniferum HOM05D004370 ORTHO05D005084 2.4e-55 219.9 178 69.1
ATR0697G198 Amborella trichopoda HOM05D004370 ORTHO05D005084 1.6e-54 217.2 188 67.6
unitig_736.g22531 Utricularia gibba HOM05D004370 ORTHO05D005084 3.5e-54 216.1 137 81.0
CBR_g48393 Chara braunii HOM05D004370 ORTHO05D005084 5.9e-54 215.3 176 68.2
C07p50900 Brassica napus HOM05D000106 ORTHO05D000160 1.0e-50 204.5 147 72.8
AUR62022051 Chenopodium quinoa HOM05D004370 ORTHO05D005084 2.3e-50 203.4 188 63.3
Lsat_1_v5_gn_8_16800 Lactuca sativa HOM05D004370 ORTHO05D005084 2.3e-50 203.4 121 85.1
arahy.Tifrunner.gnm1.ann1.IZ2YN8 Arachis hypogaea HOM05D004370 ORTHO05D005084 9.8e-49 198.0 109 90.8
Cre14.g611150 Chlamydomonas reinhardtii HOM05D004370 ORTHO05D005084 8.3e-48 194.9 159 65.4
A03p52450 Brassica napus HOM05D004370 ORTHO05D005084 1.4e-47 194.1 150 71.3
SEGI_35791 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 1.8e-47 193.7 152 71.1
BcaNung05058 Brassica carinata HOM05D004370 ORTHO05D005084 4.1e-47 192.6 144 71.5
Zm00001eb300870 Zea mays HOM05D004370 ORTHO05D005084 1.5e-44 184.1 188 58.5
MCO12G128 Micromonas commoda HOM05D004370 ORTHO05D005084 1.6e-43 180.6 152 65.1
MD04G1223300 Malus domestica HOM05D004370 ORTHO05D005084 1.0e-42 177.9 125 76.0
Dinv23904 Davidia involucrata HOM05D004370 ORTHO05D005084 2.3e-42 176.8 164 62.8
arahy.Tifrunner.gnm1.ann1.1VG4JJ Arachis hypogaea HOM05D004370 ORTHO05D005084 4.9e-40 169.1 94 89.4
SMO367G1222 Selaginella moellendorffii HOM05D004370 ORTHO05D005084 1.2e-35 154.5 94 83.0
Pp3c10_22940 Physcomitrium patens HOM05D004370 ORTHO05D005084 4.0e-34 149.4 178 53.4
MD04G1002600 Malus domestica HOM05D004370 ORTHO05D005084 3.4e-33 146.4 110 71.8
Pp3c3_24910 Physcomitrium patens HOM05D004370 ORTHO05D005084 3.4e-33 146.4 176 52.3
Pp3c3_24850 Physcomitrium patens HOM05D004370 ORTHO05D005084 9.8e-33 144.8 191 50.8
Pp3c3_24900 Physcomitrium patens HOM05D004370 ORTHO05D005084 9.8e-33 144.8 191 50.8
PRCOL_00001809 Prasinoderma coloniale HOM05D004370 ORTHO05D005084 6.2e-27 125.6 139 53.2
AUR62009175 Chenopodium quinoa HOM05D004370 ORTHO05D005084 8.6e-21 105.1 178 42.7
Oeu011279.1 Olea europaea HOM05D004370 ORTHO05D005084 1.7e-16 90.9 193 36.8
BcaNung05387 Brassica carinata HOM05D004370 ORTHO05D005084 3.5e-14 83.2 64 67.2
GSVIVG01034611001 Vitis vinifera HOM05D004370 ORTHO05D005084 7.8e-14 82.0 40 100.0
BraA03t14323Z Brassica rapa HOM05D004370 ORTHO05D005084 5.1e-13 79.3 71 63.4
SEGI_08107 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 7.3e-12 75.5 45 77.8
EL10Ac1g00433 Beta vulgaris HOM05D004370 ORTHO05D005084 1.1e-07 61.6 67 53.7
CSS0022278 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 7.1e-07 58.9 56 64.3


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