Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr04g0248641 Lupinus albus HOM05D004370 ORTHO05D005084 3.2e-92 342.4 276 100.0
Lalb_Chr10g0106891 Lupinus albus HOM05D004370 ORTHO05D005084 1.3e-85 320.5 279 86.7
arahy.Tifrunner.gnm1.ann1.B8WTIA Arachis hypogaea HOM05D004370 ORTHO05D005084 2.5e-81 306.2 284 83.1
arahy.Tifrunner.gnm1.ann1.TBHV4Q Arachis hypogaea HOM05D004370 ORTHO05D005084 2.5e-81 306.2 284 83.1
LjContig00310g0017486 Lotus japonicus HOM05D004370 ORTHO05D005084 9.0e-79 297.7 168 89.3
Phvul.008G264900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 4.4e-78 295.4 282 80.9
VMungo0647G0361 Vigna mungo HOM05D004370 ORTHO05D005084 5.8e-78 295.0 169 89.3
Ca_06302_v3 Cicer arietinum L. HOM05D004370 ORTHO05D005084 2.2e-77 293.1 168 89.9
Psat2g015400 Pisum sativum HOM05D004370 ORTHO05D005084 2.9e-77 292.7 168 87.5
Glyma.14G025900 Glycine max HOM05D004370 ORTHO05D005084 1.9e-76 290.0 167 88.6
Cpa.g.sc285.3 Carica papaya HOM05D004370 ORTHO05D005084 7.1e-76 288.1 166 89.2
TPR.G12528 Trifolium pratense HOM05D004370 ORTHO05D005084 1.6e-75 287.0 168 88.1
MBI05_g12101_MAGBIO Magnolia biondii HOM05D004370 ORTHO05D005084 6.0e-75 285.0 167 86.2
Phvul.008G234900 Phaseolus vulgaris HOM05D004370 ORTHO05D005084 6.0e-75 285.0 280 80.0
CsaV3_6G052680 Cucumis sativus L. HOM05D004370 ORTHO05D005084 7.8e-75 284.6 280 75.0
MELO3C007041.2 Cucumis melo HOM05D004370 ORTHO05D005084 1.0e-74 284.3 280 72.1
CARHR227270 Cardamine hirsuta HOM05D004370 ORTHO05D005084 5.1e-74 282.0 163 89.6
Dinv04119 Davidia involucrata HOM05D004370 ORTHO05D005084 1.5e-73 280.4 164 87.2
Atru.chr10.664 Acer truncatum HOM05D004370 ORTHO05D005084 1.9e-73 280.0 163 87.1
CANSAT25G2913 Cannabis sativa HOM05D004370 ORTHO05D005084 2.5e-73 279.6 163 87.7
MD14G1174700 Malus domestica HOM05D004370 ORTHO05D005084 2.5e-73 279.6 280 80.0
Prupe.5G168200 Prunus persica HOM05D004370 ORTHO05D005084 3.3e-73 279.3 169 86.4
Ciclev10018122m.g Citrus clementina HOM05D004370 ORTHO05D005084 4.3e-73 278.9 174 85.1
Nn1g09322 Nelumbo nucifera HOM05D004370 ORTHO05D005084 5.6e-73 278.5 165 87.3
ClCG01G025430 Citrullus lanatus HOM05D004370 ORTHO05D005084 1.3e-72 277.3 283 70.7
MD06G1169400 Malus domestica HOM05D004370 ORTHO05D005084 1.6e-72 276.9 169 85.2
Manes.06G060100 Manihot esculenta HOM05D004370 ORTHO05D005084 3.6e-72 275.8 166 86.1
Prupe.6G342400 Prunus persica HOM05D004370 ORTHO05D005084 3.6e-72 275.8 160 87.5
Sp7g18800 Schrenkiella parvula HOM05D004370 ORTHO05D005084 3.6e-72 275.8 154 90.9
Aa31LG6G2820 Aethionema arabicum HOM05D004370 ORTHO05D005084 6.2e-72 275.0 154 90.3
Aa31LG9G8700 Aethionema arabicum HOM05D004370 ORTHO05D005084 8.1e-72 274.6 154 90.3
CiPaw.13G141500 Carya illinoinensis HOM05D004370 ORTHO05D005084 8.1e-72 274.6 167 85.6
ECA238G0265 Erigeron canadensis HOM05D004370 ORTHO05D005084 1.8e-71 273.5 163 84.7
Manes.14G127000 Manihot esculenta HOM05D004370 ORTHO05D005084 1.8e-71 273.5 176 81.8
AT5G44500 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 4.0e-71 272.3 166 84.3
THA.LOC104806243 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 4.0e-71 272.3 155 89.7
Medtr5g092010 Medicago truncatula HOM05D004370 ORTHO05D005084 5.3e-71 271.9 168 83.9
SHI20646 Sapria himalayana HOM05D004370 ORTHO05D005084 5.3e-71 271.9 163 84.7
BcaC01g00671 Brassica carinata HOM05D004370 ORTHO05D005084 6.9e-71 271.6 157 87.9
C03p82950 Brassica napus HOM05D004370 ORTHO05D005084 6.9e-71 271.6 157 87.9
BcaB03g11674 Brassica carinata HOM05D004370 ORTHO05D005084 1.2e-70 270.8 162 85.2
BcaC09g51319 Brassica carinata HOM05D004370 ORTHO05D005084 1.2e-70 270.8 162 84.6
A08p14890 Brassica napus HOM05D004370 ORTHO05D005084 1.2e-70 270.8 162 85.2
C01p14450 Brassica napus HOM05D004370 ORTHO05D005084 1.2e-70 270.8 162 84.6
BolC1t01401H Brassica oleracea HOM05D004370 ORTHO05D005084 1.2e-70 270.8 162 84.6
AL7G33430 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 1.5e-70 270.4 151 90.7
AT4G20440 Arabidopsis thaliana HOM05D004370 ORTHO05D005084 1.5e-70 270.4 151 90.7
BolC3t20578H Brassica oleracea HOM05D004370 ORTHO05D005084 2.6e-70 269.6 162 85.2
HanXRQChr10g0304281 Helianthus annuus HOM05D004370 ORTHO05D005084 3.4e-70 269.2 167 83.8
A01p12130 Brassica napus HOM05D004370 ORTHO05D005084 4.5e-70 268.9 156 86.5
BraA01t01156Z Brassica rapa HOM05D004370 ORTHO05D005084 4.5e-70 268.9 156 86.5
Sed0020090 Sechium edule HOM05D004370 ORTHO05D005084 4.5e-70 268.9 169 81.7
CSS0027232 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 5.8e-70 268.5 167 83.2
Thhalv10026002m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 5.8e-70 268.5 150 90.7
Glyma.02G288900 Glycine max HOM05D004370 ORTHO05D005084 5.8e-70 268.5 152 90.8
Lsat_1_v5_gn_2_112821 Lactuca sativa HOM05D004370 ORTHO05D005084 5.8e-70 268.5 151 88.7
HanXRQChr08g0218671 Helianthus annuus HOM05D004370 ORTHO05D005084 7.6e-70 268.1 167 83.2
Lsat_1_v5_gn_8_20501 Lactuca sativa HOM05D004370 ORTHO05D005084 7.6e-70 268.1 151 88.1
AL8G15320 Arabidopsis lyrata HOM05D004370 ORTHO05D005084 9.9e-70 267.7 166 83.1
Migut.E01529 Erythranthe guttata HOM05D004370 ORTHO05D005084 1.3e-69 267.3 162 82.7
Sed0027177 Sechium edule HOM05D004370 ORTHO05D005084 1.3e-69 267.3 151 88.7
Carub.0007s2072 Capsella rubella HOM05D004370 ORTHO05D005084 1.7e-69 266.9 150 90.0
BcaNung04159 Brassica carinata HOM05D004370 ORTHO05D005084 2.2e-69 266.5 162 84.0
Hma1.2p1_0892F.1_g233360 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 3.8e-69 265.8 164 84.1
Cfa008716 Carpinus fangiana HOM05D004370 ORTHO05D005084 4.9e-69 265.4 155 88.4
Duzib160G0857 Durio zibethinus HOM05D004370 ORTHO05D005084 6.4e-69 265.0 164 84.8
TAR633G2348 Trochodendron aralioides HOM05D004370 ORTHO05D005084 6.4e-69 265.0 151 88.1
Carub.0008s0400 Capsella rubella HOM05D004370 ORTHO05D005084 8.4e-69 264.6 166 82.5
Potri.001G440100 Populus trichocarpa HOM05D004370 ORTHO05D005084 8.4e-69 264.6 176 79.5
Rhsim07G0192400 Rhododendron simsii HOM05D004370 ORTHO05D005084 8.4e-69 264.6 168 82.7
Rhsim07G0192600 Rhododendron simsii HOM05D004370 ORTHO05D005084 8.4e-69 264.6 168 82.7
Sc10g0006890 Simmondsia chinensis HOM05D004370 ORTHO05D005084 1.1e-68 264.2 165 84.2
MSTRG.1661 Avicennia marina HOM05D004370 ORTHO05D005084 1.4e-68 263.8 167 80.2
BcaNung05680 Brassica carinata HOM05D004370 ORTHO05D005084 1.4e-68 263.8 157 86.0
PGR142G3562 Punica granatum HOM05D004370 ORTHO05D005084 1.4e-68 263.8 151 86.8
CSS0048817 Camellia sinensis var. sinensis HOM05D004370 ORTHO05D005084 2.4e-68 263.1 167 82.0
Aqoxy1G00534 Aquilegia oxysepala HOM05D004370 ORTHO05D005084 3.2e-68 262.7 151 86.8
FAN04G0169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 3.2e-68 262.7 164 83.5
Lj5C81T13 Lonicera japonica HOM05D004370 ORTHO05D005084 3.2e-68 262.7 151 86.8
Medtr8g080090 Medicago truncatula HOM05D004370 ORTHO05D005084 3.2e-68 262.7 169 81.7
SalBow1G7578 Salvia bowleyana HOM05D004370 ORTHO05D005084 3.2e-68 262.7 161 81.4
Haze_11726 Corylus avellana HOM05D004370 ORTHO05D005084 5.4e-68 261.9 153 88.2
Sopen01g038350 Solanum pennellii HOM05D004370 ORTHO05D005084 5.4e-68 261.9 179 77.7
CDE10G0749 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 9.3e-68 261.2 151 87.4
Hma1.2p1_0258F.1_g104020 Hydrangea macrophylla HOM05D004370 ORTHO05D005084 9.3e-68 261.2 168 83.3
Lj9P663T35 Lonicera japonica HOM05D004370 ORTHO05D005084 9.3e-68 261.2 167 82.0
Solyc01g094540.4 Solanum lycopersicum HOM05D004370 ORTHO05D005084 1.2e-67 260.8 179 77.1
BraA08t33472Z Brassica rapa HOM05D000106 ORTHO05D005084 2.1e-67 260.0 156 84.0
PGSC0003DMG400000167 Solanum tuberosum HOM05D004370 ORTHO05D005084 3.5e-67 259.2 164 81.7
RcHm_v2.0_Chr3g0451231 Rosa chinensis HOM05D004370 ORTHO05D005084 4.6e-67 258.8 173 80.9
Thhalv10001000m.g Eutrema salsugineum HOM05D004370 ORTHO05D005084 6.0e-67 258.5 156 85.9
QL06p021586 Quercus lobata HOM05D004370 ORTHO05D005084 6.0e-67 258.5 167 80.8
COL.COLO4_26893 Corchorus olitorius HOM05D004370 ORTHO05D005084 7.9e-67 258.1 170 80.6
TWI15G0591 Tripterygium wilfordii HOM05D004370 ORTHO05D005084 7.9e-67 258.1 145 89.0
Potri.011G155700 Populus trichocarpa HOM05D004370 ORTHO05D005084 1.0e-66 257.7 147 88.4
FvH4_5g05920 Fragaria vesca HOM05D004370 ORTHO05D005084 1.3e-66 257.3 164 82.3
FAN18G1507 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.3e-66 257.3 164 82.3
Oeu043883.1 Olea europaea HOM05D004370 ORTHO05D005084 1.3e-66 257.3 154 84.4
FAN08G0371 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.8e-66 256.9 164 81.7
FAN13G1169 Fragaria x ananassa HOM05D004370 ORTHO05D005084 1.8e-66 256.9 164 81.7
Oeu031694.1 Olea europaea HOM05D004370 ORTHO05D005084 6.7e-66 255.0 161 82.0
SGA_v2.0_scaffold163G38072 Striga asiatica HOM05D004370 ORTHO05D005084 6.7e-66 255.0 167 77.2
CDE10G0801 Ceratophyllum demersum HOM05D004370 ORTHO05D005084 1.1e-65 254.2 148 86.5
Ah.16g102810 Amaranthus hybridus HOM05D004370 ORTHO05D005084 1.9e-65 253.4 151 86.1
Gohir.D10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 1.9e-65 253.4 172 80.8
SGA_v2.0_scaffold169G38655 Striga asiatica HOM05D004370 ORTHO05D005084 2.5e-65 253.1 167 76.6
Gohir.A10G005600 Gossypium hirsutum HOM05D004370 ORTHO05D005084 3.3e-65 252.7 172 80.2
RcHm_v2.0_Chr7g0192911 Rosa chinensis HOM05D004370 ORTHO05D005084 9.6e-65 251.1 151 85.4
CAN.G78.61 Capsicum annuum HOM05D004370 ORTHO05D005084 1.3e-64 250.8 168 78.0
Gorai.011G006200 Gossypium raimondii HOM05D004370 ORTHO05D005084 1.3e-64 250.8 172 80.2
Sabra16G0297300 Salix brachista HOM05D004370 ORTHO05D005084 2.1e-64 250.0 163 80.4
FAN13G1413 Fragaria x ananassa HOM05D004370 ORTHO05D005084 2.8e-64 249.6 160 80.6
QL03p043504 Quercus lobata HOM05D004370 ORTHO05D005084 6.2e-64 248.4 173 76.9
Solyc05g049950.3 Solanum lycopersicum HOM05D004370 ORTHO05D005084 8.1e-64 248.1 164 78.7
Sopen05g028310 Solanum pennellii HOM05D004370 ORTHO05D005084 8.1e-64 248.1 164 78.7
THA.LOC104812077 Tarenaya hassleriana HOM05D004370 ORTHO05D005084 1.4e-63 247.3 155 82.6
Ah.10g036820 Amaranthus hybridus HOM05D004370 ORTHO05D005084 1.8e-63 246.9 153 83.0
DCAR_006631 Daucus carota HOM05D004370 ORTHO05D005084 1.8e-63 246.9 166 78.9
AUR62000301 Chenopodium quinoa HOM05D004370 ORTHO05D005084 3.1e-63 246.1 153 82.4
AUR62009174 Chenopodium quinoa HOM05D004370 ORTHO05D005084 3.1e-63 246.1 153 82.4
PGSC0003DMG400021647 Solanum tuberosum HOM05D004370 ORTHO05D005084 3.1e-63 246.1 163 78.5
Actinidia35547 Actinidia chinensis HOM05D004370 ORTHO05D005084 1.5e-62 243.8 172 77.3
HPP92_018640 Vanilla planifolia HOM05D004370 ORTHO05D005084 4.2e-60 235.7 156 78.8
Cc09_g05790 Coffea canephora HOM05D004370 ORTHO05D005084 9.3e-60 234.6 154 79.9
Migut.A00202 Erythranthe guttata HOM05D004370 ORTHO05D005084 2.1e-59 233.4 144 81.9
Peaxi162Scf00020g00025 Petunia axillaris HOM05D004370 ORTHO05D005084 2.1e-59 233.4 141 83.7
Thecc.06G007600 Theobroma cacao HOM05D004370 ORTHO05D005084 2.7e-59 233.0 149 81.9
Mapoly0023s0062 Marchantia polymorpha HOM05D004370 ORTHO05D005084 7.9e-59 231.5 167 75.4
unitig_899.g14482 Utricularia gibba HOM05D004370 ORTHO05D005084 6.7e-58 228.4 142 82.4
Eucgr.L00005 Eucalyptus grandis HOM05D004370 ORTHO05D005084 1.9e-57 226.9 158 75.9
Sabra11G0144100 Salix brachista HOM05D004370 ORTHO05D005084 1.9e-57 226.9 160 76.9
Zm00001eb117150 Zea mays HOM05D004370 ORTHO05D005084 1.6e-56 223.8 164 72.6
ATR0697G198 Amborella trichopoda HOM05D004370 ORTHO05D005084 5.3e-55 218.8 187 65.8
PSO339G5217 Papaver somniferum HOM05D004370 ORTHO05D005084 1.5e-54 217.2 162 71.6
PSO384G4426 Papaver somniferum HOM05D004370 ORTHO05D005084 1.5e-54 217.2 162 71.6
unitig_736.g22531 Utricularia gibba HOM05D004370 ORTHO05D005084 1.0e-53 214.5 136 79.4
CBR_g48393 Chara braunii HOM05D004370 ORTHO05D005084 1.9e-52 210.3 167 67.7
C07p50900 Brassica napus HOM05D000106 ORTHO05D000160 2.7e-51 206.5 137 77.4
Lsat_1_v5_gn_8_16800 Lactuca sativa HOM05D004370 ORTHO05D005084 4.6e-51 205.7 120 85.0
arahy.Tifrunner.gnm1.ann1.IZ2YN8 Arachis hypogaea HOM05D004370 ORTHO05D005084 1.5e-49 200.7 109 92.7
A03p52450 Brassica napus HOM05D004370 ORTHO05D005084 5.7e-49 198.7 132 78.0
BcaNung05058 Brassica carinata HOM05D004370 ORTHO05D005084 2.2e-48 196.8 132 77.3
AUR62022051 Chenopodium quinoa HOM05D004370 ORTHO05D005084 1.8e-47 193.7 177 64.4
Cre14.g611150 Chlamydomonas reinhardtii HOM05D004370 ORTHO05D005084 4.1e-47 192.6 158 63.3
SEGI_35791 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 4.1e-47 192.6 165 66.1
Zm00001eb300870 Zea mays HOM05D004370 ORTHO05D005084 7.9e-43 178.3 164 61.6
MCO12G128 Micromonas commoda HOM05D004370 ORTHO05D005084 6.7e-42 175.3 151 62.9
MD04G1223300 Malus domestica HOM05D004370 ORTHO05D005084 2.0e-41 173.7 124 72.6
arahy.Tifrunner.gnm1.ann1.1VG4JJ Arachis hypogaea HOM05D004370 ORTHO05D005084 7.4e-41 171.8 94 91.5
Dinv23904 Davidia involucrata HOM05D004370 ORTHO05D005084 2.2e-40 170.2 163 60.1
SMO367G1222 Selaginella moellendorffii HOM05D004370 ORTHO05D005084 7.2e-36 155.2 94 81.9
MD04G1002600 Malus domestica HOM05D004370 ORTHO05D005084 2.7e-35 153.3 109 74.3
Pp3c10_22940 Physcomitrium patens HOM05D004370 ORTHO05D005084 7.4e-33 145.2 167 52.7
Pp3c3_24850 Physcomitrium patens HOM05D004370 ORTHO05D005084 4.8e-32 142.5 167 50.9
Pp3c3_24900 Physcomitrium patens HOM05D004370 ORTHO05D005084 4.8e-32 142.5 167 50.9
Pp3c3_24910 Physcomitrium patens HOM05D004370 ORTHO05D005084 8.2e-32 141.7 167 50.9
PRCOL_00001809 Prasinoderma coloniale HOM05D004370 ORTHO05D005084 6.7e-26 122.1 138 50.0
AUR62009175 Chenopodium quinoa HOM05D004370 ORTHO05D005084 1.7e-21 107.5 168 44.6
Oeu011279.1 Olea europaea HOM05D004370 ORTHO05D005084 4.0e-18 96.3 53 84.9
GSVIVG01034611001 Vitis vinifera HOM05D004370 ORTHO05D005084 2.2e-13 80.5 40 97.5
BraA03t14323Z Brassica rapa HOM05D004370 ORTHO05D005084 3.8e-13 79.7 54 74.1
SEGI_08107 Sequoiadendron giganteum HOM05D004370 ORTHO05D005084 3.8e-13 79.7 50 76.0
BcaNung05387 Brassica carinata HOM05D004370 ORTHO05D005084 6.5e-13 79.0 55 72.7
EL10Ac1g00433 Beta vulgaris HOM05D004370 ORTHO05D005084 3.1e-07 60.1 67 52.2


User provided reference genes

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