Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0533371 Helianthus annuus HOM05D002849 ORTHO05D007186 9.2e-62 240.0 115 100.0
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 1.6e-53 212.6 113 88.5
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 4.6e-53 211.1 113 85.0
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 3.0e-52 208.4 115 86.1
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 1.5e-51 206.1 117 81.2
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 1.9e-51 205.7 117 81.2
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 1.9e-51 205.7 117 82.1
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 1.9e-51 205.7 117 82.1
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 2.5e-51 205.3 117 82.1
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 3.3e-51 204.9 117 82.9
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 5.6e-51 204.1 119 80.7
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 7.3e-51 203.8 117 82.1
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 9.6e-51 203.4 117 80.3
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 1.3e-50 203.0 117 81.2
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 1.6e-50 202.6 117 81.2
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 2.1e-50 202.2 117 81.2
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 2.1e-50 202.2 117 79.5
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 2.8e-50 201.8 118 79.7
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 2.8e-50 201.8 117 81.2
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 2.8e-50 201.8 117 80.3
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 2.8e-50 201.8 116 81.9
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 2.8e-50 201.8 116 80.2
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 2.8e-50 201.8 117 81.2
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 3.6e-50 201.4 117 80.3
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 3.6e-50 201.4 116 80.2
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 4.8e-50 201.1 118 80.5
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 8.1e-50 200.3 117 82.1
CARHR139440 Cardamine hirsuta HOM05D002849 ORTHO05D007186 8.1e-50 200.3 118 79.7
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 8.1e-50 200.3 119 79.8
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 1.1e-49 199.9 120 79.2
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 1.1e-49 199.9 117 79.5
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 1.1e-49 199.9 117 82.1
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 1.1e-49 199.9 117 82.1
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 1.4e-49 199.5 114 79.8
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 1.4e-49 199.5 117 79.5
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 1.4e-49 199.5 117 79.5
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.8e-49 199.1 118 79.7
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 1.8e-49 199.1 117 80.3
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 2.4e-49 198.7 114 82.5
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 3.1e-49 198.4 117 81.2
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 4.0e-49 198.0 116 79.3
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 4.0e-49 198.0 119 80.7
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 5.3e-49 197.6 119 79.0
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 5.3e-49 197.6 119 79.0
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 9.0e-49 196.8 121 79.3
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 9.0e-49 196.8 116 80.2
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 9.0e-49 196.8 118 79.7
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 1.2e-48 196.4 119 80.7
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.2e-48 196.4 114 84.2
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 1.2e-48 196.4 114 82.5
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 1.2e-48 196.4 114 82.5
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 1.2e-48 196.4 115 78.3
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 1.2e-48 196.4 115 78.3
Peaxi162Scf00166g00633 Petunia axillaris HOM05D002849 ORTHO05D007186 1.2e-48 196.4 114 81.6
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 1.5e-48 196.1 119 78.2
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 1.5e-48 196.1 115 80.9
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 2.0e-48 195.7 115 80.9
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 2.0e-48 195.7 115 80.9
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 2.0e-48 195.7 140 71.4
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 2.6e-48 195.3 119 78.2
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 2.6e-48 195.3 113 78.8
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 2.6e-48 195.3 114 79.8
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 3.4e-48 194.9 117 76.9
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 3.4e-48 194.9 115 80.0
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 4.4e-48 194.5 120 79.2
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 4.4e-48 194.5 114 82.5
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 7.6e-48 193.7 117 80.3
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 9.9e-48 193.4 115 81.7
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 9.9e-48 193.4 113 80.5
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 1.3e-47 193.0 119 77.3
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 1.3e-47 193.0 119 77.3
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 1.3e-47 193.0 117 77.8
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 1.3e-47 193.0 113 84.1
ATR0661G077 Amborella trichopoda HOM05D002849 ORTHO05D007186 2.9e-47 191.8 125 71.2
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 2.9e-47 191.8 115 79.1
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 2.9e-47 191.8 119 75.6
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 6.4e-47 190.7 116 75.0
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 6.4e-47 190.7 117 80.3
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 8.4e-47 190.3 112 83.0
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 1.1e-46 189.9 115 79.1
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 1.4e-46 189.5 115 80.0
AT1G76170 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 2.4e-46 188.7 117 77.8
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 4.2e-46 188.0 122 75.4
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 9.3e-46 186.8 117 73.5
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 3.5e-45 184.9 109 80.7
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 6.0e-45 184.1 104 84.6
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 5.1e-44 181.0 92 89.1
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 6.6e-44 180.6 88 94.3
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 3.3e-43 178.3 92 88.0
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 9.6e-43 176.8 111 74.8
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 1.8e-41 172.6 121 71.9
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 2.4e-41 172.2 121 70.2
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 6.9e-41 170.6 113 73.5
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 9.0e-41 170.2 120 70.8
SalBow6G3808 Salvia bowleyana HOM05D002849 ORTHO05D007186 2.0e-40 169.1 101 81.2
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 3.4e-40 168.3 121 68.6
Lj9A176T24 Lonicera japonica HOM05D002849 ORTHO05D007186 1.9e-38 162.5 100 81.0
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 4.2e-38 161.4 94 80.9
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 1.2e-37 159.8 106 69.8
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 2.1e-37 159.1 88 83.0
RcHm_v2.0_Chr6g0303951 Rosa chinensis HOM05D002849 ORTHO05D007186 6.0e-37 157.5 94 76.6
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 1.1e-35 153.3 95 78.9
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 1.9e-35 152.5 88 77.3
Psat5g001160 Pisum sativum HOM05D002849 ORTHO05D007186 4.0e-33 144.8 98 72.4
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 5.3e-33 144.4 70 91.4
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 9.0e-33 143.7 93 68.8
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 2.9e-31 138.7 94 72.3
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 2.9e-31 138.7 89 73.0
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 3.8e-31 138.3 94 72.3
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 6.0e-29 131.0 95 64.2
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 4.3e-27 124.8 87 60.9
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 1.3e-26 123.2 62 88.7
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 7.6e-24 114.0 92 56.5
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 1.3e-23 113.2 85 65.9
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 1.6e-18 96.3 51 84.3
Peaxi162Scf00445g00105 Petunia axillaris HOM05D002849 ORTHO05D007186 6.5e-15 84.3 56 71.4
BolC5t33314H Brassica oleracea HOM05D002849 ORTHO05D024297 1.2e-13 80.1 77 55.8
TAR276G0001 Trochodendron aralioides HOM05D002849 ORTHO05D051491 3.9e-12 75.1 54 68.5
C05p45940 Brassica napus HOM05D002849 ORTHO05D024297 1.1e-11 73.6 80 50.0
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 1.1e-09 67.0 194 27.8
Actinidia17029 Actinidia chinensis HOM05D000148 ORTHO05D000081 1.4e-09 66.6 31 90.3
A05p30360 Brassica napus HOM05D002849 ORTHO05D024297 2.6e-08 62.4 38 76.3
BraA05t21874Z Brassica rapa HOM05D002849 ORTHO05D024297 2.6e-08 62.4 38 76.3


User provided reference genes

Program Settings